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7O4W
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Crystal structure of diphtheria toxin mutant CRM197 with a disulphide bond replaced by a Cys-Acetone-Cys bridge
分子名称: 1,2-ETHANEDIOL, 1-hydroxypropan-2-one, ACETATE ION, ...
著者Veggi, D, Dello Iacono, L.
登録日2021-04-07
公開日2022-04-06
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.03002071 Å)
主引用文献Retaining the structural integrity of disulfide bonds in diphtheria toxoid carrier protein is crucial for the effectiveness of glycoconjugate vaccine candidates.
Chem Sci, 13, 2022
8R4I
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Cryo-EM structure of human islet amyloid polypeptide (hIAPP)
分子名称: Islet amyloid polypeptide
著者Ooi, S.A, Valli, D, Maj, M.
登録日2023-11-13
公開日2024-03-06
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (4.01 Å)
主引用文献Improving cryo-EM grids for amyloid fibrils using interface-active solutions and spectator proteins.
Biophys.J., 123, 2024
6MK5
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Solution NMR structure of spider toxin analogue [F5A,M6F,T26L,K28R]GpTx-1
分子名称: Toxin GTx1-15
著者Schroeder, C.I.
登録日2018-09-25
公開日2018-12-19
最終更新日2023-06-14
実験手法SOLUTION NMR
主引用文献Peptide-Membrane Interactions Affect the Inhibitory Potency and Selectivity of Spider Toxins ProTx-II and GpTx-1.
ACS Chem. Biol., 14, 2019
7OCJ
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BU of 7ocj by Molmil
Crystal structure of E.coli LexA in complex with nanobody NbSOS2(Nb14509)
分子名称: 1,2-ETHANEDIOL, LexA repressor, NbSOS2 (14509)
著者Maso, L, Vascon, F, Chinellato, M, Pardon, E, Steyaert, J, Angelini, A, Tondi, D, Cendron, L.
登録日2021-04-27
公開日2022-10-26
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Nanobodies targeting LexA autocleavage disclose a novel suppression strategy of SOS-response pathway.
Structure, 30, 2022
8R9X
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Local refinement of the PDCoV spike glycoprotein ectodomain in complex with the 22C10 antibody Fab fragment
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Debski-Antoniak, O, Hurdiss, D.L.
登録日2023-11-30
公開日2024-06-05
最終更新日2024-07-03
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献Neutralizing antibodies reveal cryptic vulnerabilities and interdomain crosstalk in the porcine deltacoronavirus spike protein.
Nat Commun, 15, 2024
8R9Z
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S1B domain of the PDCoV spike glycoprotein in complex with the 67B12 and 46E6 antibody Fab fragments
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 46E6 antibody heavy chain, ...
著者Debski-Antoniak, O, Hurdiss, D.L.
登録日2023-11-30
公開日2024-06-05
最終更新日2024-07-03
実験手法ELECTRON MICROSCOPY (2.9 Å)
主引用文献Neutralizing antibodies reveal cryptic vulnerabilities and interdomain crosstalk in the porcine deltacoronavirus spike protein.
Nat Commun, 15, 2024
8R9Y
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S1B domain of the PDCoV spike glycoprotein in complex with the 67B12 and 42H3 antibody Fab fragments
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 42H3 antibody heavy chain, ...
著者Debski-Antoniak, O, Hurdiss, D.L.
登録日2023-11-30
公開日2024-06-05
最終更新日2024-07-03
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献Neutralizing antibodies reveal cryptic vulnerabilities and interdomain crosstalk in the porcine deltacoronavirus spike protein.
Nat Commun, 15, 2024
8R9W
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BU of 8r9w by Molmil
PDCoV spike glycoprotein ectodomain in complex with the 22C10 antibody Fab fragment
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 22C10 antibody heavy chain, ...
著者Debski-Antoniak, O, Hurdiss, D.L.
登録日2023-11-30
公開日2024-06-05
最終更新日2024-07-03
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献Neutralizing antibodies reveal cryptic vulnerabilities and interdomain crosstalk in the porcine deltacoronavirus spike protein.
Nat Commun, 15, 2024
6NVX
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BU of 6nvx by Molmil
Crystal structure of penicillin G acylase from Bacillus sp. FJAT-27231
分子名称: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, CALCIUM ION, GLYCEROL, ...
著者Blankenfeldt, W.
登録日2019-02-05
公開日2019-07-03
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.36 Å)
主引用文献Crystal structures and protein engineering of three different penicillin G acylases from Gram-positive bacteria with different thermostability.
Appl.Microbiol.Biotechnol., 103, 2019
7OZ2
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BU of 7oz2 by Molmil
Crystal structure of HIV-1 reverse transcriptase with a double stranded DNA showing a transient P-pocket
分子名称: CADMIUM ION, DNA (28-MER), DNA (5'-D(*AP*CP*AP*GP*TP*CP*CP*CP*TP*GP*TP*TP*CP*GP*GP*GP*CP*GP*CP*CP*G)-3'), ...
著者Martinez, S.E, Singh, A.K, Das, K.
登録日2021-06-25
公開日2021-12-08
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.85 Å)
主引用文献Sliding of HIV-1 reverse transcriptase over DNA creates a transient P pocket - targeting P-pocket by fragment screening.
Nat Commun, 12, 2021
3SDP
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THE 2.1 ANGSTROMS RESOLUTION STRUCTURE OF IRON SUPEROXIDE DISMUTASE FROM PSEUDOMONAS OVALIS
分子名称: FE (III) ION, IRON SUPEROXIDE DISMUTASE
著者Stoddard, B.L, Ringe, D, Petsko, G.A.
登録日1991-05-06
公開日1993-04-15
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献The 2.1-A resolution structure of iron superoxide dismutase from Pseudomonas ovalis.
Biochemistry, 29, 1990
6NIV
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BU of 6niv by Molmil
Racemic Phenol-Soluble Modulin Alpha 3 Peptide
分子名称: Phenol-soluble modulin PSM-alpha-3
著者Yao, Z, Cary, B.P, Bingman, C.A, Wang, C, Kreitler, D.F, Satyshur, K.A, Forest, K.T, Gellman, S.H.
登録日2018-12-31
公開日2019-05-15
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献Use of a Stereochemical Strategy To Probe the Mechanism of Phenol-Soluble Modulin alpha 3 Toxicity.
J.Am.Chem.Soc., 141, 2019
3SY9
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BU of 3sy9 by Molmil
Crystal structure of Pseudomonas aeruginosa OccD2 (OpdC)
分子名称: (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE, Histidine porin OpdC, octyl beta-D-glucopyranoside
著者van den Berg, B, Eren, E.
登録日2011-07-16
公開日2012-02-08
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Substrate Specificity within a Family of Outer Membrane Carboxylate Channels.
Plos Biol., 10, 2012
7OJ1
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BU of 7oj1 by Molmil
Bacillus subtilis IMPDH in complex with Ap4A
分子名称: BIS(ADENOSINE)-5'-TETRAPHOSPHATE, Inosine-5'-monophosphate dehydrogenase, MAGNESIUM ION
著者Giammarinaro, P.I, Bange, G.
登録日2021-05-13
公開日2022-09-14
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.44 Å)
主引用文献Diadenosine tetraphosphate regulates biosynthesis of GTP in Bacillus subtilis.
Nat Microbiol, 7, 2022
2KNP
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BU of 2knp by Molmil
Isolation and characterization of peptides from Momordica cochinchinensis seeds.
分子名称: MCoCC-1
著者Daly, N.L, Chan, L.
登録日2009-08-30
公開日2009-11-10
最終更新日2022-03-16
実験手法SOLUTION NMR
主引用文献Isolation and characterization of peptides from Momordica cochinchinensis seeds.
J.Nat.Prod., 72, 2009
6NVY
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BU of 6nvy by Molmil
Crystal structure of penicillin G acylase from Bacillus thermotolerans
分子名称: CALCIUM ION, GLYCEROL, Penicillin G acylase
著者Blankenfeldt, W.
登録日2019-02-05
公開日2019-07-03
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.27 Å)
主引用文献Crystal structures and protein engineering of three different penicillin G acylases from Gram-positive bacteria with different thermostability.
Appl.Microbiol.Biotechnol., 103, 2019
7OOO
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BU of 7ooo by Molmil
The crystal structure of a DNA:RNA hybrid duplex sequence CTTTTCTTTG containing an LNA-Amide-LNA modification
分子名称: DNA (5'-D(*CP*TP*(05A)P*TP*CP*TP*TP*TP*G)-3'), MAGNESIUM ION, RNA (5'-R(*CP*AP*AP*AP*GP*AP*AP*AP*AP*G)-3')
著者Thorpe, C, Hardwick, J, McDonough, M.A, Hall, J.P, Baker, Y.R, El-Sagheer, A.H, Brown, T.
登録日2021-05-28
公開日2022-08-03
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.57 Å)
主引用文献An LNA-amide modification that enhances the cell uptake and activity of phosphorothioate exon-skipping oligonucleotides.
Nat Commun, 13, 2022
7OOS
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The crystal structure of a DNA:RNA hybrid duplex sequence CTTTTCTTTG
分子名称: DNA (5'-D(*CP*TP*(05K)P*TP*CP*TP*TP*TP*G)-3'), RNA (5'-R(*CP*AP*AP*AP*GP*AP*AP*AP*AP*G)-3'), STRONTIUM ION
著者Thorpe, C, Hardwick, J, McDonough, M.A, Hall, J.P, Baker, Y.R, El-Sagheer, A.H, Brown, T.
登録日2021-05-28
公開日2022-08-03
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献An LNA-amide modification that enhances the cell uptake and activity of phosphorothioate exon-skipping oligonucleotides.
Nat Commun, 13, 2022
7OZZ
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BU of 7ozz by Molmil
The crystal structure of a DNA:RNA hybrid duplex sequence CTTTTCTTTG with LNA-amide modification
分子名称: DNA (5'-D(*CP*TP*(05H)P*TP*CP*TP*TP*TP*G)-3'), POTASSIUM ION, RNA (5'-R(*CP*AP*AP*AP*GP*AP*AP*AP*AP*G)-3')
著者Thorpe, C, Hardwick, J, McDonough, M.A, Hall, J.P, Baker, Y.R, El-Sagheer, A.H, Brown, T.
登録日2021-06-29
公開日2022-08-03
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献An LNA-amide modification that enhances the cell uptake and activity of phosphorothioate exon-skipping oligonucleotides.
Nat Commun, 13, 2022
5V62
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Phospho-ERK2 bound to bivalent inhibitor SBP3
分子名称: 5-(2-PHENYLPYRAZOLO[1,5-A]PYRIDIN-3-YL)-1H-PYRAZOLO[3,4-C]PYRIDAZIN-3-AMINE, GLYCEROL, Mitogen-activated protein kinase 1, ...
著者Lechtenberg, B.C, Riedl, S.J.
登録日2017-03-15
公開日2017-07-26
最終更新日2024-07-10
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structure-Guided Strategy for the Development of Potent Bivalent ERK Inhibitors.
ACS Med Chem Lett, 8, 2017
8SE8
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BU of 8se8 by Molmil
HTRA-1 PD/SA bound to CKP 1G10
分子名称: Cysteine knot peptide, GLYCEROL, SULFATE ION, ...
著者Ultsch, M.H.
登録日2023-04-08
公開日2024-07-03
実験手法X-RAY DIFFRACTION (3.18 Å)
主引用文献HTRA-1 PD/SA bound to CKP 1G10
To Be Published
8SE7
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HTRA-1 PDSA bound to CKP 1A8
分子名称: Cysteine knot peptide, Serine protease HTRA1
著者Ultsch, M.H, Kirchhofer, D, Wei, Y.
登録日2023-04-08
公開日2024-07-03
実験手法X-RAY DIFFRACTION (2.96 Å)
主引用文献HTRA-1 PDSA bound to CKP 1A8
To Be Published
5V60
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Phospho-ERK2 bound to AMP-PCP
分子名称: GLYCEROL, MAGNESIUM ION, Mitogen-activated protein kinase 1, ...
著者Lechtenberg, B.C, Riedl, S.J.
登録日2017-03-15
公開日2017-07-26
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.18 Å)
主引用文献Structure-Guided Strategy for the Development of Potent Bivalent ERK Inhibitors.
ACS Med Chem Lett, 8, 2017
8SDP
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BU of 8sdp by Molmil
HTRA-1 PDSA bound to CKP 3A7
分子名称: Cysteine knot peptide 3A7, SULFATE ION, Serine protease HTRA1
著者Ultsch, M.H, Kirchhofer, D, Wei, Y.
登録日2023-04-07
公開日2024-07-03
実験手法X-RAY DIFFRACTION (2.87 Å)
主引用文献HTRA-1 PDSA bound to CKP 3A7
To Be Published
7PT0
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SCO3201 with putative ligand
分子名称: SPERMIDINE, TetR family transcriptional regulator
著者Werten, S, Palm, G.J, Hinrichs, W.
登録日2021-09-25
公開日2021-10-20
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.89 Å)
主引用文献Crystal structures of free and ligand-bound forms of the TetR/AcrR-like regulator SCO3201 from Streptomyces coelicolor suggest a novel allosteric mechanism.
Febs J., 290, 2023

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件を2024-09-25に公開中

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