PDB: 41454 件ウェブページステータス検索Chemie searchBIRD

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2O6M	H98Q mutant of the homing endonuclease I-PPOI complexed with DNA 分子名称: 5'-D(*DTP*DTP*DGP*DAP*DCP*DTP*DCP*DTP*DCP*DTP*DTP*DAP*DAP*DGP*DAP*DGP*DAP*DGP*DTP*DCP*DA)-3', Intron-encoded endonuclease I-PpoI, MAGNESIUM ION, ... 著者 Eastberg, J.H, Stoddard, B.L. 登録日 2006-12-07 公開日 2007-10-30 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Mutability of an HNH nuclease imidazole general base and exchange of a deprotonation mechanism. Biochemistry, 46, 2007
2IXM	Structure of human PTPA 分子名称: SERINE/THREONINE-PROTEIN PHOSPHATASE 2A REGULATORY SUBUNIT B' 著者 Leulliot, N, Vicentini, G, Jordens, J, Quevillon-Cheruel, S, Schiltz, M, Barford, D, Van Tilbeurgh, H, Goris, J. 登録日 2006-07-09 公開日 2006-07-11 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (1.5 Å) 主引用文献 Crystal Structure of the Pp2A Phosphatase Activator: Implications for its Pp2A-Specific Ppiase Activity Mol.Cell, 23, 2006
2IXN	CRYSTAL STRUCTURE OF THE PP2A PHOSPHATASE ACTIVATOR Ypa2 PTPA2 分子名称: SERINE/THREONINE-PROTEIN PHOSPHATASE 2A ACTIVATOR 2 著者 Leulliot, N, Vicentini, G, Jordens, J, Quevillon-Cheruel, S, Schiltz, M, Barford, D, Van Tilbeurgh, H, Goris, J. 登録日 2006-07-09 公開日 2006-07-31 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 Crystal Structure of the Pp2A Phosphatase Activator: Implications for its Pp2A-Specific Ppiase Activity Mol.Cell, 23, 2006
5W72	Impact of IR active probes on PDZ3 and its ligand binding studied by NMR and X-ray crystallography 分子名称: Disks large homolog 4 著者 Lehner, F, Kudlinzki, D, Schwalbe, H, Silvers, R. 登録日 2017-06-19 公開日 2017-12-13 最終更新日 2023-11-15 実験手法 SOLUTION NMR 主引用文献 Impact of Azidohomoalanine Incorporation on Protein Structure and Ligand Binding. Chembiochem, 18, 2017
5Z20	The ternary structure of D-lactate dehydrogenase from Pseudomonas aeruginosa with NADH and oxamate 分子名称: 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, D-lactate dehydrogenase (Fermentative), DI(HYDROXYETHYL)ETHER, ... 著者 Furukawa, N, Miyanaga, A, Nakajima, M, Taguchi, H. 登録日 2017-12-28 公開日 2018-09-19 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Structural Basis of Sequential Allosteric Transitions in Tetrameric d-Lactate Dehydrogenases from Three Gram-Negative Bacteria. Biochemistry, 57, 2018
8DVR	Cryo-EM structure of RIG-I bound to the end of p3SLR30 (+AMPPNP) 分子名称: Antiviral innate immune response receptor RIG-I, GUANOSINE-5'-TRIPHOSPHATE, ZINC ION, ... 著者 Wang, W, Pyle, A.M. 登録日 2022-07-29 公開日 2022-11-02 最終更新日 2024-06-12 実験手法 ELECTRON MICROSCOPY (3.3 Å) 主引用文献 The RIG-I receptor adopts two different conformations for distinguishing host from viral RNA ligands. Mol.Cell, 82, 2022
8DVS	Cryo-EM structure of RIG-I bound to the end of OHSLR30 (+ATP) 分子名称: ADENOSINE-5'-DIPHOSPHATE, Antiviral innate immune response receptor RIG-I, MAGNESIUM ION, ... 著者 Wang, W, Pyle, A.M. 登録日 2022-07-29 公開日 2022-11-16 最終更新日 2024-06-12 実験手法 ELECTRON MICROSCOPY (3 Å) 主引用文献 The RIG-I receptor adopts two different conformations for distinguishing host from viral RNA ligands. Mol.Cell, 82, 2022
8DVU	Cryo-EM structure of RIG-I bound to the internal sites of OHSLR30 (+ATP) 分子名称: ADENOSINE-5'-DIPHOSPHATE, Antiviral innate immune response receptor RIG-I, MAGNESIUM ION, ... 著者 Wang, W, Pyle, A.M. 登録日 2022-07-29 公開日 2022-11-16 最終更新日 2024-06-12 実験手法 ELECTRON MICROSCOPY (2.9 Å) 主引用文献 The RIG-I receptor adopts two different conformations for distinguishing host from viral RNA ligands. Mol.Cell, 82, 2022
1ECE	ACIDOTHERMUS CELLULOLYTICUS ENDOCELLULASE E1 CATALYTIC DOMAIN IN COMPLEX WITH A CELLOTETRAOSE 分子名称: ENDOCELLULASE E1, beta-D-glucopyranose-(1-4)-beta-D-glucopyranose-(1-4)-beta-D-glucopyranose-(1-4)-beta-D-glucopyranose 著者 Sakon, J, Thomas, S.R, Himmel, M.E, Karplus, P.A. 登録日 1996-04-04 公開日 1996-10-14 最終更新日 2020-07-29 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 Crystal structure of thermostable family 5 endocellulase E1 from Acidothermus cellulolyticus in complex with cellotetraose. Biochemistry, 35, 1996
5C6E	Joint X-ray/neutron structure of equine cyanomet hemoglobin in R state 分子名称: CYANIDE ION, Hemoglobin subunit alpha, Hemoglobin subunit beta, ... 著者 Dajnowicz, S, Sean, S, Hanson, B.L, Fisher, S.Z, Langan, P, Kovalevsky, A.Y, Mueser, T.C. 登録日 2015-06-22 公開日 2016-06-22 最終更新日 2024-03-06 実験手法 NEUTRON DIFFRACTION (1.7 Å), X-RAY DIFFRACTION 主引用文献 Visualizing the Bohr effect in hemoglobin: neutron structure of equine cyanomethemoglobin in the R state and comparison with human deoxyhemoglobin in the T state. Acta Crystallogr D Struct Biol, 72, 2016
2OF5	Oligomeric Death Domain complex 分子名称: Death domain-containing protein CRADD, Leucine-rich repeat and death domain-containing protein 著者 Park, H.H, Logette, E, Raunser, S, Cuenin, S, Walz, T, Tschopp, J, Wu, H. 登録日 2007-01-02 公開日 2007-04-17 最終更新日 2023-12-27 実験手法 X-RAY DIFFRACTION (3.2 Å) 主引用文献 Death domain assembly mechanism revealed by crystal structure of the oligomeric PIDDosome core complex. Cell(Cambridge,Mass.), 128, 2007
5VVH	Crystal Structure of the Effector Binding Domain of LysR-type Transcriptional Regulator, OccR from Agrobacterium tumefaciens 分子名称: FORMIC ACID, Octopine catabolism/uptake operon regulatory protein OccR, SULFATE ION 著者 Kim, Y, Chhor, G, Jedrzejczak, R, Winans, S.C, Joachimiak, A, Midwest Center for Structural Genomics (MCSG) 登録日 2017-05-19 公開日 2017-06-21 最終更新日 2018-09-19 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Crystal Structure of the Ligand-Binding Domain of a LysR-type Transcriptional Regulator: Transcriptional Activation via a Rotary Switch. Mol. Microbiol., 2018
5D1L	Crystal Structure of UbcH5B in Complex with the RING-U5BR Fragment of AO7 (Y165A) 分子名称: DI(HYDROXYETHYL)ETHER, E3 ubiquitin-protein ligase RNF25, OXALATE ION, ... 著者 Liang, Y.-H, Li, S, Weissman, A.M, Ji, X. 登録日 2015-08-04 公開日 2015-10-28 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (1.618 Å) 主引用文献 Insights into Ubiquitination from the Unique Clamp-like Binding of the RING E3 AO7 to the E2 UbcH5B. J.Biol.Chem., 290, 2015
1LAT	GLUCOCORTICOID RECEPTOR MUTANT/DNA COMPLEX 分子名称: DNA (5'-D(*TP*TP*CP*CP*AP*GP*AP*AP*CP*AP*TP*GP*TP*TP*CP*TP*G P*GP*A)-3'), GLUCOCORTICOID RECEPTOR, ZINC ION 著者 Gewirth, D.T, Sigler, P.B. 登録日 1995-12-18 公開日 1996-04-03 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 The basis for half-site specificity explored through a non-cognate steroid receptor-DNA complex. Nat.Struct.Biol., 2, 1995
5Z21	The ternary structure of D-lactate dehydrogenase from Fusobacterium nucleatum with NADH and oxamate 分子名称: 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, D-lactate dehydrogenase, OXAMIC ACID 著者 Furukawa, N, Miyanaga, A, Nakajima, M, Taguchi, H. 登録日 2017-12-28 公開日 2018-09-19 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Structural Basis of Sequential Allosteric Transitions in Tetrameric d-Lactate Dehydrogenases from Three Gram-Negative Bacteria. Biochemistry, 57, 2018
5DCE	Neisseria meningitidis 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase regulated (Tryptophan) 分子名称: MANGANESE (II) ION, Phospho-2-dehydro-3-deoxyheptonate aldolase, TRYPTOPHAN 著者 Heyes, L.C, Parker, E.J. 登録日 2015-08-24 公開日 2016-08-24 最終更新日 2024-03-06 実験手法 X-RAY DIFFRACTION (2.23 Å) 主引用文献 The Functional Unit of Neisseria meningitidis 3-Deoxy--Arabino-Heptulosonate 7-Phosphate Synthase Is Dimeric. Plos One, 11, 2016
5DJA	Fc Heterodimer Design 9.1 Y407M + T366I 分子名称: Fc-III peptide, Ig gamma-1 chain C region, beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-6)-[alpha-D-mannopyranose-(1-3)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose 著者 Atwell, S, Leaver-Fay, A, Froning, K.J, Aldaz, H, Pustilnik, A, Lu, F, Huang, F, Yuan, R, Dhanani, S.H, Chamberlain, A.K, Fitchett, J.R, Gutierrez, B, Hendle, J, Demarest, S.J, Kuhlman, B. 登録日 2015-09-01 公開日 2016-03-30 最終更新日 2020-07-29 実験手法 X-RAY DIFFRACTION (2.9 Å) 主引用文献 Computationally Designed Bispecific Antibodies using Negative State Repertoires. Structure, 24, 2016
5Z1Z	The apo-structure of D-lactate dehydrogenase from Escherichia coli 分子名称: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding, DI(HYDROXYETHYL)ETHER, MAGNESIUM ION 著者 Furukawa, N, Miyanaga, A, Nakajima, M, Taguchi, H. 登録日 2017-12-28 公開日 2018-09-19 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (1.97 Å) 主引用文献 Structural Basis of Sequential Allosteric Transitions in Tetrameric d-Lactate Dehydrogenases from Three Gram-Negative Bacteria. Biochemistry, 57, 2018
5D1K	Crystal Structure of UbcH5B in Complex with the RING-U5BR Fragment of AO7 分子名称: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, E3 ubiquitin-protein ligase RNF25, ... 著者 Liang, Y.-H, Li, S, Weissman, A.M, Ji, X. 登録日 2015-08-04 公開日 2015-10-28 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (1.78 Å) 主引用文献 Insights into Ubiquitination from the Unique Clamp-like Binding of the RING E3 AO7 to the E2 UbcH5B. J.Biol.Chem., 290, 2015
5DI8	Fc Knob-Hole Heterodimer T366W + T366S/L368A/Y407V 分子名称: Fc-III peptide, Ig gamma-1 chain C region, beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-6)-[alpha-D-mannopyranose-(1-3)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose 著者 Atwell, S, Leaver-Fay, A, Froning, K.J, Aldaz, H, Pustilnik, A, Lu, F, Huang, F, Yuan, R, Dhanani, S.H, Chamberlain, A.K, Fitchett, J.R, Gutierrez, B, Hendle, J, Secrist, E, Demarest, S.J, Kuhlman, B. 登録日 2015-08-31 公開日 2016-03-30 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Computationally Designed Bispecific Antibodies using Negative State Repertoires. Structure, 24, 2016
4TT3	The Pathway of Binding of the Intrinsically Disordered Mitochondrial Inhibitor Protein to F1-ATPase 分子名称: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, ATP synthase subunit alpha, ... 著者 Bason, J.V, Montgomery, M.G, Leslie, A.G.W, Walker, J.E. 登録日 2014-06-19 公開日 2014-08-06 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (3.21 Å) 主引用文献 Pathway of binding of the intrinsically disordered mitochondrial inhibitor protein to F1-ATPase. Proc.Natl.Acad.Sci.USA, 111, 2014
4TSF	The Pathway of Binding of the Intrinsically Disordered Mitochondrial Inhibitor Protein to F1-ATPase 分子名称: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, ATP synthase subunit alpha, ... 著者 Bason, J.V, Montgomery, M.G, Leslie, A.G.W, Walker, J.E. 登録日 2014-06-18 公開日 2014-08-06 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (3.2 Å) 主引用文献 Pathway of binding of the intrinsically disordered mitochondrial inhibitor protein to F1-ATPase. Proc.Natl.Acad.Sci.USA, 111, 2014
3CDG	Human CD94/NKG2A in complex with HLA-E 分子名称: Beta-2-microglobulin, HLA class I histocompatibility antigen, alpha chain E, ... 著者 Petrie, E.J, Clements, C.S, Lin, J, Sullivan, L.C, Johnson, D, Huyton, T, Heroux, A, Hoare, H.L, Beddoe, T, Reid, H.H, Wilce, M.C.J, Brooks, A.G, Rossjohn, J. 登録日 2008-02-26 公開日 2008-04-22 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (3.4 Å) 主引用文献 CD94-NKG2A recognition of human leukocyte antigen (HLA)-E bound to an HLA class I leader sequence J.Exp.Med., 205, 2008
1LS1	T. aquaticus Ffh NG Domain at 1.1A Resolution 分子名称: MAGNESIUM ION, OXYGEN MOLECULE, SIGNAL RECOGNITION PARTICLE PROTEIN 著者 Ramirez, U.D, Minasov, G, Freymann, D.M. 登録日 2002-05-16 公開日 2002-11-16 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (1.1 Å) 主引用文献 Structural Basis for Mobility in the 1.1 A Crystal Structure of the NG Domain of Thermus aquaticus Ffh J.Mol.Biol., 320, 2002
1MNA	Thioesterase Domain of Picromycin Polyketide Synthase (PICS TE), pH 8.0 分子名称: polyketide synthase IV 著者 Tsai, S.-C, Lu, H, Cane, D.E, Khosla, C, Stroud, R.M. 登録日 2002-09-05 公開日 2003-02-04 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Insights into channel architecture and substrate specificity from crystal structures of two macrocycle-forming thioesterases of modular polyketide synthases Biochemistry, 41, 2002

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