PDB: 85 件ウェブページステータス検索Chemie searchBIRD

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6ROK	The crystal structure of a complex between the LlFpg protein, a THF-DNA and an inhibitor 分子名称: 2,8-dithioxo-1,2,3,7,8,9-hexahydro-6H-purin-6-one, DNA (5'-D(*CP*TP*CP*TP*TP*TP*(3DR)P*TP*TP*TP*CP*TP*CP*G)-3'), DNA (5'-D(*GP*CP*GP*AP*GP*AP*AP*AP*CP*AP*AP*AP*GP*A)-3'), ... 著者 Coste, F, Goffinont, S, Castaing, B. 登録日 2019-05-13 公開日 2020-04-15 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (1.95 Å) 主引用文献 Thiopurine Derivative-Induced Fpg/Nei DNA Glycosylase Inhibition: Structural, Dynamic and Functional Insights. Int J Mol Sci, 21, 2020
6RNM	Crystal structure of a complex between the LlFpg protein, a THF-DNA and an inhibitor 分子名称: 6-azanyl-9~{H}-purine-8-thiol, DNA (5'-D(*CP*TP*CP*TP*TP*TP*(3DR)P*TP*TP*TP*CP*TP*CP*G)-3'), DNA (5'-D(*GP*CP*GP*AP*GP*AP*AP*AP*CP*AP*AP*AP*GP*A)-3'), ... 著者 Coste, F, Goffinont, S, Castaing, B. 登録日 2019-05-09 公開日 2020-04-15 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (1.76 Å) 主引用文献 Thiopurine Derivative-Induced Fpg/Nei DNA Glycosylase Inhibition: Structural, Dynamic and Functional Insights. Int J Mol Sci, 21, 2020
6RP0	The crystal structure of a complex between the LlFpg protein, a THF-DNA and an inhibitor 分子名称: 2,8-dithioxo-1,2,3,7,8,9-hexahydro-6H-purin-6-one, DNA (5'-D(*CP*TP*CP*TP*TP*TP*(3DR)P*TP*TP*TP*CP*TP*CP*G)-3'), DNA (5'-D(*GP*CP*GP*AP*GP*AP*AP*AP*CP*AP*AP*AP*GP*A)-3'), ... 著者 Coste, F, Goffinont, S, Castaing, B. 登録日 2019-05-13 公開日 2020-04-15 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (2.25 Å) 主引用文献 Thiopurine Derivative-Induced Fpg/Nei DNA Glycosylase Inhibition: Structural, Dynamic and Functional Insights. Int J Mol Sci, 21, 2020
1L1T	MutM (Fpg) Bound to Abasic-Site Containing DNA 分子名称: 5'-D(*AP*G*GP*TP*AP*GP*AP*CP*CP*TP*GP*GP*AP*CP*GP*C)-3', 5'-D(*TP*GP*C*GP*TP*CP*CP*AP*(HPD)P*GP*TP*CP*TP*AP*CP*C)-3', MutM, ... 著者 Fromme, J.C, Verdine, G.L. 登録日 2002-02-19 公開日 2002-06-14 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Structural insights into lesion recognition and repair by the bacterial 8-oxoguanine DNA glycosylase MutM. Nat.Struct.Biol., 9, 2002
1NNJ	Crystal structure Complex between the Lactococcus lactis Fpg and an abasic site containing DNA 分子名称: 5'-D(*CP*TP*CP*TP*TP*TP*(PDI)P*TP*TP*TP*CP*TP*CP*G)-3', 5'-D(*GP*CP*GP*AP*GP*AP*AP*AP*CP*AP*AP*AP*GP*A)-3', Formamidopyrimidine-DNA glycosylase, ... 著者 Serre, L, Pereira de Jesus, K, Boiteux, S, Zelwer, C, Castaing, B. 登録日 2003-01-14 公開日 2003-02-11 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Structural insights into abasic site for Fpg specific binding and catalysis: comparative high-resolution crystallographic studies of Fpg bound to various models of abasic site analogues-containing DNA. Nucleic Acids Res., 33, 2005
1L2C	MutM (Fpg)-DNA Estranged Thymine Mismatch Recognition Complex 分子名称: 5'-D(*AP*G*GP*TP*AP*GP*AP*CP*TP*TP*GP*GP*AP*CP*GP*C)-3', 5'-D(*TP*GP*C*GP*TP*CP*CP*AP*(HPD)P*GP*TP*CP*TP*AP*CP*C)-3', MutM, ... 著者 Fromme, J.C, Verdine, G.L. 登録日 2002-02-20 公開日 2002-06-14 最終更新日 2023-08-16 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Structural insights into lesion recognition and repair by the bacterial 8-oxoguanine DNA glycosylase MutM. Nat.Struct.Biol., 9, 2002
1PJI	Crystal structure of wild type Lactococcus lactis FPG complexed to a 1,3 propanediol containing DNA 分子名称: DNA (5'-D(*CP*TP*CP*TP*TP*TP*(PDI)P*TP*TP*TP*CP*TP*CP*G)-3'), DNA (5'-D(*GP*CP*GP*AP*GP*AP*AP*AP*CP*AP*AP*AP*GP*A)-3'), Formamidopyrimidine-DNA glycosylase, ... 著者 Pereira, K, Serre, L, Zelwer, C, Castaing, B. 登録日 2003-06-03 公開日 2004-08-03 最終更新日 2023-08-16 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Structural insights into abasic site for Fpg specific binding and catalysis: comparative high-resolution crystallographic studies of Fpg bound to various models of abasic site analogues-containing DNA. Nucleic Acids Res., 33, 2005
1PJJ	Complex between the Lactococcus lactis Fpg and an abasic site containing DNA. 分子名称: DNA (5'-D(*CP*TP*CP*TP*TP*TP*(3DR)P*TP*TP*TP*CP*TP*CP*G)-3'), DNA (5'-D(*GP*CP*GP*AP*GP*AP*AP*AP*CP*AP*AP*AP*GP*A)-3'), Formamidopyrimidine-DNA glycosylase, ... 著者 Serre, L, Pereira de Jesus, K, Boiteux, S, Zelwer, C, Castaing, B. 登録日 2003-06-03 公開日 2004-06-08 最終更新日 2023-08-16 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Structural insights into abasic site for Fpg specific binding and catalysis: comparative high-resolution crystallographic studies of Fpg bound to various models of abasic site analogues-containing DNA. Nucleic Acids Res., 33, 2005
1Q3B	Crystal structure of the DNA repair enzyme endonuclease-VIII (Nei) from E. coli: The R252A mutant at 2.05 resolution. 分子名称: Endonuclease VIII, GLYCEROL, MAGNESIUM ION, ... 著者 Golan, G, Zharkov, D.O, Feinberg, H, Fernandes, A.S, Zaika, E.I, Kycia, J.H, Grollman, A.P, Shoham, G. 登録日 2003-07-29 公開日 2004-08-03 最終更新日 2023-08-16 実験手法 X-RAY DIFFRACTION (2.05 Å) 主引用文献 Structure of the uncomplexed DNA repair enzyme endonuclease VIII indicates significant interdomain flexibility. Nucleic Acids Res., 33, 2005
1PM5	Crystal structure of wild type Lactococcus lactis Fpg complexed to a tetrahydrofuran containing DNA 分子名称: DNA (5'-D(*CP*TP*CP*TP*TP*TP*(3DR)P*TP*TP*TP*CP*TP*CP*G)-3'), DNA (5'-D(*GP*CP*GP*AP*GP*AP*AP*AP*CP*AP*AP*AP*GP*A)-3'), Formamidopyrimidine-DNA glycosylase, ... 著者 Pereira de Jesus-Tran, K, Serre, L, Zelwer, C, Castaing, B. 登録日 2003-06-10 公開日 2004-07-27 最終更新日 2023-08-16 実験手法 X-RAY DIFFRACTION (1.95 Å) 主引用文献 Structural insights into abasic site for Fpg specific binding and catalysis: comparative high-resolution crystallographic studies of Fpg bound to various models of abasic site analogues-containing DNA. Nucleic Acids Res., 33, 2005
1Q39	Crystal structure of the DNA repair enzyme endonuclease-VIII (Nei) from E. coli: The WT enzyme at 2.8 resolution. 分子名称: CALCIUM ION, Endonuclease VIII, ZINC ION 著者 Golan, G, Zharkov, D.O, Feinberg, H, Fernandes, A.S, Zaika, E.I, Kycia, J.H, Grollman, A.P, Shoham, G. 登録日 2003-07-29 公開日 2004-08-03 最終更新日 2023-08-16 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 Structure of the uncomplexed DNA repair enzyme endonuclease VIII indicates significant interdomain flexibility. Nucleic Acids Res., 33, 2005
1Q3C	Crystal structure of the DNA repair enzyme endonuclease-VIII (Nei) from E. coli: The E2A mutant at 2.3 resolution. 分子名称: Endonuclease VIII, GLYCEROL, MAGNESIUM ION, ... 著者 Golan, G, Zharkov, D.O, Feinberg, H, Fernandes, A.S, Zaika, E.I, Kycia, J.H, Grollman, A.P, Shoham, G. 登録日 2003-07-29 公開日 2004-08-03 最終更新日 2023-08-16 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Structure of the uncomplexed DNA repair enzyme endonuclease VIII indicates significant interdomain flexibility. Nucleic Acids Res., 33, 2005
3GO8	MutM encountering an intrahelical 8-oxoguanine (oxoG) lesion in EC3-loop deletion complex 分子名称: 5'-D(*GP*CP*GP*TP*CP*CP*(8OG)P*GP*AP*TP*CP*TP*AP*C)-3', 5'-D(P*GP*GP*TP*AP*GP*AP*TP*CP*CP*GP*GP*AP*CP*G)-3', Formamidopyrimidine-DNA glycosylase, ... 著者 Spong, M.C, Qi, Y, Verdine, G.L. 登録日 2009-03-18 公開日 2009-12-15 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (1.89 Å) 主引用文献 Encounter and extrusion of an intrahelical lesion by a DNA repair enzyme Nature, 462, 2009
3GPU	MutM encountering an intrahelical 8-oxoguanine (oxoG) lesion in EC4-loop deletion complex 分子名称: DNA (5'-D(*AP*GP*GP*TP*AP*GP*AP*CP*TP*CP*GP*GP*AP*CP*GP*C)-3'), DNA (5'-D(*TP*GP*CP*GP*TP*CP*CP*(8OG)P*AP*GP*TP*CP*TP*AP*CP*C)-3'), DNA glycosylase, ... 著者 Banerjee, A, Qi, Y, Verdine, G.L. 登録日 2009-03-23 公開日 2009-11-10 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (1.62 Å) 主引用文献 Encounter and extrusion of an intrahelical lesion by a DNA repair enzyme. Nature, 462, 2009
3GQ3	MutM encountering an intrahelical 8-oxoguanine (oxoG) lesion in EC5-loop deletion complex 分子名称: DNA (5'-D(*AP*GP*GP*TP*AP*GP*AP*CP*CP*CP*GP*GP*AP*CP*GP*C)-3'), DNA (5'-D(*TP*GP*CP*GP*TP*CP*CP*GP*(8OG)P*GP*TP*CP*TP*AP*CP*C)-3'), DNA glycosylase, ... 著者 Banerjee, A, Qi, Y, Verdine, G.L. 登録日 2009-03-23 公開日 2009-11-10 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (1.83 Å) 主引用文献 Encounter and extrusion of an intrahelical lesion by a DNA repair enzyme. Nature, 462, 2009
3GPX	Sequence-matched MutM Interrogation Complex 4 (IC4) 分子名称: DNA (5'-D(*A*GP*GP*TP*AP*GP*AP*CP*TP*CP*GP*GP*AP*CP*GP*C)-3'), DNA (5'-D(*TP*GP*CP*GP*TP*CP*CP*GP*AP*GP*TP*CP*TP*AP*CP*C)-3'), DNA glycosylase, ... 著者 Spong, M.C, Qi, Y, Verdine, G.L. 登録日 2009-03-23 公開日 2009-11-10 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (1.78 Å) 主引用文献 Encounter and extrusion of an intrahelical lesion by a DNA repair enzyme. Nature, 462, 2009
3GQ5	Sequence-matched MutM Interrogation Complex 5 (IC5) 分子名称: DNA (5'-D(*A*GP*GP*TP*AP*GP*AP*CP*CP*CP*GP*GP*AP*CP*GP*C)-3'), DNA (5'-D(*TP*GP*CP*GP*T*CP*CP*GP*GP*GP*TP*CP*TP*AP*CP*C)-3'), DNA glycosylase, ... 著者 Qi, Y, Verdine, G.L. 登録日 2009-03-23 公開日 2009-11-10 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Encounter and extrusion of an intrahelical lesion by a DNA repair enzyme. Nature, 462, 2009
3GP1	MutM encountering an intrahelical 8-oxoguanine (oxoG) lesion in EC3-V222P complex 分子名称: 5'-D(*AP*GP*GP*TP*AP*GP*AP*TP*CP*CP*GP*GP*AP*CP*GP*CP**C)-3', 5'-D(P*TP*GP*CP*GP*TP*CP*CP*(8OG)P*GP*AP*TP*CP*TP*AP*CP*C)-3', DNA glycosylase, ... 著者 Spong, M.C, Qi, Y, Verdine, G.L. 登録日 2009-03-20 公開日 2009-11-10 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (2.05 Å) 主引用文献 Encounter and extrusion of an intrahelical lesion by a DNA repair enzyme Nature, 462, 2009
3GPP	MutM encountering an intrahelical 8-oxoguanine (oxoG) lesion in EC3-T224P complex 分子名称: DNA (5'-D(P*CP*GP*TP*CP*CP*(8OG)P*GP*AP*TP*CP*TP*AP*C)-3'), DNA (5'-D(P*GP*GP*TP*AP*GP*AP*TP*CP*CP*GP*GP*AP*C)-3'), DNA glycosylase, ... 著者 Spong, M.C, Qi, Y, Verdine, G.L. 登録日 2009-03-23 公開日 2009-11-10 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (2.15 Å) 主引用文献 Encounter and extrusion of an intrahelical lesion by a DNA repair enzyme. Nature, 462, 2009
3GPY	Sequence-matched MutM Lesion Recognition Complex 3 (LRC3) 分子名称: DNA (5'-D(*AP*GP*GP*TP*AP*GP*AP*TP*CP*CP*GP*GP*AP*CP*GP*C)-3'), DNA (5'-D(*T*GP*CP*GP*TP*CP*CP*(8OG)P*GP*AP*TP*CP*TP*AP*CP*C)-3'), DNA glycosylase, ... 著者 Qi, Y, Verdine, G.L. 登録日 2009-03-23 公開日 2009-11-10 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (1.85 Å) 主引用文献 Encounter and extrusion of an intrahelical lesion by a DNA repair enzyme. Nature, 462, 2009
3GQ4	Sequence-matched MutM Lesion Recognition Complex 5 (LRC5) 分子名称: DNA (5'-D(*AP*GP*GP*TP*AP*GP*AP*CP*CP*CP*GP*GP*AP*CP*GP*C)-3'), DNA (5'-D(*TP*GP*CP*GP*TP*CP*CP*GP*(8OG)P*GP*TP*CP*TP*AP*CP*C)-3'), DNA glycosylase, ... 著者 Spong, M.C, Qi, Y, Verdine, G.L. 登録日 2009-03-23 公開日 2009-11-10 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 Encounter and extrusion of an intrahelical lesion by a DNA repair enzyme. Nature, 462, 2009
3JR4	MutM interrogating an extrahelical G 分子名称: DNA (5'-D(*AP*GP*GP*TP*AP*GP*AP*CP*CP*TP*GP*GP*AP*CP*GP*C)-3'), DNA (5'-D(*TP*G*CP*GP*TP*CP*CP*AP*(GX1)P*GP*TP*CP*TP*AP*CP*C)-3'), DNA glycosylase, ... 著者 Qi, Y, Spong, M.C, Verdine, G.L. 登録日 2009-09-08 公開日 2009-11-03 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (2.601 Å) 主引用文献 Entrapment and structure of an extrahelical guanine attempting to enter the active site of a bacterial DNA glycosylase, MutM. J.Biol.Chem., 285, 2010
3U6O	MutM set 1 ApG 分子名称: DNA (5'-D(*A*GP*GP*TP*AP*GP*AP*TP*CP*CP*TP*GP*AP*CP*GP*C)-3'), DNA (5'-D(*TP*GP*CP*GP*TP*CP*AP*GP*GP*AP*(08Q)P*CP*TP*AP*CP*C)-3'), Formamidopyrimidine-DNA glycosylase, ... 著者 Sung, R.J, Zhang, M, Qi, Y, Verdine, G.L. 登録日 2011-10-12 公開日 2012-04-25 最終更新日 2013-09-25 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Sequence-dependent structural variation in DNA undergoing intrahelical inspection by the DNA glycosylase MutM. J.Biol.Chem., 287, 2012
3U6L	MutM set 2 CpGo 分子名称: DNA (5'-D(*AP*GP*GP*TP*AP*GP*AP*CP*CP*GP*GP*AP*CP*GP*C)-3'), DNA (5'-D(*TP*GP*CP*GP*TP*CP*CP*(8OG)P*GP*TP*(CX2)P*TP*AP*CP*C)-3'), Formamidopyrimidine-DNA glycosylase, ... 著者 Sung, R.J, Zhang, M, Qi, Y, Verdine, G.L. 登録日 2011-10-12 公開日 2012-04-25 最終更新日 2017-01-11 実験手法 X-RAY DIFFRACTION (1.97 Å) 主引用文献 Sequence-dependent structural variation in DNA undergoing intrahelical inspection by the DNA glycosylase MutM. J.Biol.Chem., 287, 2012
3U6M	Structural effects of sequence context on lesion recognition by MutM 分子名称: DNA (5'-D(*AP*GP*GP*TP*AP*GP*AP*CP*CP*AP*GP*GP*AP*CP*GP*C)-3'), DNA (5'-D(*TP*GP*CP*GP*TP*CP*CP*TP*(8OG)P*GP*TP*(CX2)P*TP*AP*CP*C)-3'), Formamidopyrimidine-DNA glycosylase, ... 著者 Sung, R.J, Zhang, M, Qi, Y, Verdine, G.L. 登録日 2011-10-12 公開日 2012-04-25 最終更新日 2013-09-25 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Sequence-dependent structural variation in DNA undergoing intrahelical inspection by the DNA glycosylase MutM. J.Biol.Chem., 287, 2012

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