Crystal structure Complex between the Lactococcus lactis Fpg and an abasic site containing DNA

Summary for 1NNJ

Related1KFV 1EE8 1K82 1L1T
Descriptor5'-D(*CP*TP*CP*TP*TP*TP*(PDI)P*TP*TP*TP*CP*TP*CP*G)-3', 5'-D(*GP*CP*GP*AP*GP*AP*AP*AP*CP*AP*AP*AP*GP*A)-3', Formamidopyrimidine-DNA glycosylase, ... (6 entities in total)
Functional Keywordsdna repair, fpg, mutm, abasic site, hydrolase
Biological sourceLactococcus lactis
Total number of polymer chains3
Total molecular weight39694.21
Serre, L.,Pereira de Jesus, K.,Boiteux, S.,Zelwer, C.,Castaing, B. (deposition date: 2003-01-14, release date: 2003-02-11, Last modification date: 2011-07-13)
Primary citation
Pereira de Jesus, K.,Serre, L.,Zelwer, C.,Castaing, B.
Structural insights into abasic site for Fpg specific binding and catalysis: comparative high-resolution crystallographic studies of Fpg bound to various models of abasic site analogues-containing DNA.
Nucleic Acids Res., 33:5936-5944, 2005
PubMed: 16243784 (PDB entries with the same primary citation)
DOI: 10.1093/nar/gki879
MImport into Mendeley
Experimental method

Structure validation

RfreeClashscoreRamachandran outliersSidechain outliersRSRZ outliers 0.212100 3.0% 4.8%MetricValuePercentile RanksWorseBetterPercentile relative to all X-ray structuresPercentile relative to X-ray structures of similar resolution
Download full validation reportDownload
PDB entries from 2020-12-02