Complex between the Lactococcus lactis Fpg and an abasic site containing DNA.

Summary for 1PJJ

Related1KFV 1EE8 1K82 1L1T
DescriptorDNA (5'-D(*CP*TP*CP*TP*TP*TP*(3DR)P*TP*TP*TP*CP*TP*CP*G)-3'), DNA (5'-D(*GP*CP*GP*AP*GP*AP*AP*AP*CP*AP*AP*AP*GP*A)-3'), Formamidopyrimidine-DNA glycosylase, ... (6 entities in total)
Functional Keywordsdna repair, fpg, mutm, abasic site, hydrolase-dna complex, hydrolase/dna
Biological sourceLactococcus lactis
Total number of polymer chains3
Total molecular weight39828.34
Serre, L.,Pereira de Jesus, K.,Boiteux, S.,Zelwer, C.,Castaing, B. (deposition date: 2003-06-03, release date: 2004-06-08, Last modification date: 2011-07-13)
Primary citation
Pereira de Jesus, K.,Serre, L.,Zelwer, C.,Castaing, B.
Structural insights into abasic site for Fpg specific binding and catalysis: comparative high-resolution crystallographic studies of Fpg bound to various models of abasic site analogues-containing DNA.
Nucleic Acids Res., 33:5936-5944, 2005
PubMed: 16243784 (PDB entries with the same primary citation)
DOI: 10.1093/nar/gki879
MImport into Mendeley
Experimental method

Structure validation

RfreeClashscoreRamachandran outliersSidechain outliersRSRZ outliers 0.2067 0.7% 1.3% 9.1%MetricValuePercentile RanksWorseBetterPercentile relative to all X-ray structuresPercentile relative to X-ray structures of similar resolution
Download full validation reportDownload
PDB entries from 2020-10-28