1PJJ
Complex between the Lactococcus lactis Fpg and an abasic site containing DNA.
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (D) | DNA (5'-D(*CP*TP*CP*TP*TP*TP*(3DR)P*TP*TP*TP*CP*TP*CP*G)-3') | polymer | 14 | 4054.6 | 1 | |||
| 2 | B (E) | DNA (5'-D(*GP*CP*GP*AP*GP*AP*AP*AP*CP*AP*AP*AP*GP*A)-3') | polymer | 14 | 4355.9 | 1 | |||
| 3 | C (A) | Formamidopyrimidine-DNA glycosylase | polymer | 271 | 31076.2 | 1 | UniProt (P42371) Pfam (PF01149) Pfam (PF06831) Pfam (PF06827) | Lactococcus lactis | FAPY-DNA glycosylase |
| 4 | D (A) | ZINC ION | non-polymer | 65.4 | 1 | Chemie (ZN) | |||
| 5 | E, F, G (A) | GLYCEROL | non-polymer | 92.1 | 3 | Chemie (GOL) | |||
| 6 | H, I, J (D, E, A) | water | water | 18.0 | 278 | Chemie (HOH) |
Sequence modifications
A: 1 - 271 (UniProt: P42371)
| PDB | External Database | Details |
|---|---|---|
| Gly 1 | Pro 2 | engineered mutation |
| - | Asp 138 | SEE REMARK 999 |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 3 |
| Total formula weight | 39486.7 | |
| Non-Polymers* | Number of molecules | 4 |
| Total formula weight | 341.7 | |
| All* | Total formula weight | 39828.3 |
