PDB: 256 件ウェブページステータス検索Chemie searchBIRD

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5HWJ	Crystal structure of keto-deoxy-D-galactarate dehydratase 分子名称: FORMIC ACID, GLYCEROL, Probable 5-dehydro-4-deoxyglucarate dehydratase 著者 Taberman, H, Parkkinen, T, Hakulinen, N, Rouvinen, J. 登録日 2016-01-29 公開日 2016-03-23 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (1.648 Å) 主引用文献 Structure and function of a decarboxylating Agrobacterium tumefaciens keto-deoxy-d-galactarate dehydratase. Biochemistry, 53, 2014
6UE0	Crystal structure of dihydrodipicolinate synthase from Klebsiella pneumoniae bound to pyruvate 分子名称: 4-hydroxy-tetrahydrodipicolinate synthase, CHLORIDE ION, SULFATE ION 著者 Impey, R.E, Lee, M, Hawkins, D.A, Sutton, J.M, Panjikar, S, Perugini, M.A, Soares da Costa, T.P. 登録日 2019-09-20 公開日 2020-02-05 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (1.892 Å) 主引用文献 Mis-annotations of a promising antibiotic target in high-priority gram-negative pathogens. Febs Lett., 594, 2020
6U01	Dihydrodipicolinate synthase (DHDPS) from C.jejuni, N84D mutant with pyruvate bound in the active site 分子名称: 1,2-ETHANEDIOL, 4-hydroxy-tetrahydrodipicolinate synthase, ACETATE ION, ... 著者 Saran, S, Majdi Yazdi, M, Lehnert, L, Palmer, D.R.J, Sanders, D.A.R. 登録日 2019-08-13 公開日 2019-12-04 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (1.87 Å) 主引用文献 Asparagine-84, a regulatory allosteric site residue, helps maintain the quaternary structure of Campylobacter jejuni dihydrodipicolinate synthase. J.Struct.Biol., 209, 2020
6ARH	Crystal structure of Human NAL at a resolution of 1.6 Angstrom 分子名称: ACETATE ION, N-acetylneuraminate lyase 著者 Pearce, F.G, Bundela, R, Keown, J.R. 登録日 2017-08-22 公開日 2018-08-22 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 Crystal structure of Human NAL at a resolution of 1.6 Angstrom To Be Published
1S5T	Crystal Structure Analysis of a mutant of DIHYDRODIPICOLINATE SYNTHASE--residue thr44 to val44 分子名称: Dihydrodipicolinate synthase 著者 Dobson, R.C.J, Valegard, K, Gerrard, J.A. 登録日 2004-01-21 公開日 2004-04-27 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 The Crystal Structure of Three Site-directed Mutants of Escherichia coli Dihydrodipicolinate Synthase: Further Evidence for a Catalytic Triad J.MOL.BIOL., 338, 2004
1S5V	Crystal Structure Analysis of a mutant of DIHYDRODIPICOLINATE SYNTHASE--residue Tyr107 to Phe107 分子名称: Dihydrodipicolinate synthase 著者 Dobson, R.C.J, Valegard, K, Gerrard, J.A. 登録日 2004-01-21 公開日 2004-04-27 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (2.35 Å) 主引用文献 The Crystal Structure of Three Site-directed Mutants of Escherichia coli Dihydrodipicolinate Synthase: Further Evidence for a Catalytic Triad J.MOL.BIOL., 338, 2004
1S5W	Crystal Structure Analysis of a mutant of DIHYDRODIPICOLINATE SYNTHASE--residue Tyr133 to Phe133 分子名称: Dihydrodipicolinate synthase 著者 Dobson, R.C.J, Valegard, K, Gerrard, J.A. 登録日 2004-01-21 公開日 2004-04-27 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (2.32 Å) 主引用文献 The Crystal Structure of Three Site-directed Mutants of Escherichia coli Dihydrodipicolinate Synthase: Further Evidence for a Catalytic Triad J.MOL.BIOL., 338, 2004
5KZE	N-acetylneuraminate lyase from methicillin-resistant Staphylococcus aureus 分子名称: GLYCEROL, N-acetylneuraminate lyase, SULFATE ION 著者 North, R.A, Watson, A.J.A, Pearce, F.G, Muscroft-Taylor, A.C, Friemann, R, Fairbanks, A.J, Dobson, R.C.J. 登録日 2016-07-25 公開日 2017-01-11 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (1.74 Å) 主引用文献 Structure and inhibition of N-acetylneuraminate lyase from methicillin-resistant Staphylococcus aureus. FEBS Lett., 590, 2016
4M19	dihydrodipicolinate synthase from C. jejuni with pyruvate bound to the active site and Lysine bound to allosteric site 分子名称: 1,2-ETHANEDIOL, 4-hydroxy-tetrahydrodipicolinate synthase, DI(HYDROXYETHYL)ETHER, ... 著者 Conly, C.J.T. 登録日 2013-08-02 公開日 2015-01-14 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Tyrosine 110 Plays a Critical Role in Regulating the Allosteric Inhibition of Campylobacter jejuni Dihydrodipicolinate Synthase by Lysine. Biochemistry, 53, 2014
5KTL	Dihydrodipicolinate synthase from the industrial and evolutionarily important cyanobacteria Anabaena variabilis. 分子名称: 4-hydroxy-tetrahydrodipicolinate synthase, MANGANESE (II) ION 著者 Christensen, J.B, Panjikar, S, Perugini, M. 登録日 2016-07-11 公開日 2016-11-30 実験手法 X-RAY DIFFRACTION (1.92 Å) 主引用文献 Structure and Function of Cyanobacterial DHDPS and DHDPR. Sci Rep, 6, 2016
5KZD	N-acetylneuraminate lyase from methicillin-resistant Staphylococcus aureus with bound sialic acid alditol 分子名称: (2~{S},4~{S},5~{R},6~{R},7~{S},8~{R})-5-acetamido-2,4,6,7,8,9-hexakis(oxidanyl)nonanoic acid, N-acetylneuraminate lyase 著者 North, R.A, Watson, A.J.A, Pearce, F.G, Muscroft-Taylor, A.C, Friemann, R, Fairbanks, A.J, Dobson, R.C.J. 登録日 2016-07-25 公開日 2017-01-11 最終更新日 2024-03-06 実験手法 X-RAY DIFFRACTION (2.334 Å) 主引用文献 Structure and inhibition of N-acetylneuraminate lyase from methicillin-resistant Staphylococcus aureus. FEBS Lett., 590, 2016
5LKY	X-ray crystal structure of N-acetylneuraminic acid lyase in complex with pyruvate, with the phenylalanine at position 190 replaced with the non-canonical amino acid dihydroxypropylcysteine. 分子名称: DI(HYDROXYETHYL)ETHER, N-acetylneuraminate lyase 著者 Windle, C.L, Trinh, C.H, Pearson, A.R, Nelson, A.S, Berry, A. 登録日 2016-07-25 公開日 2017-03-22 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 Extending enzyme molecular recognition with an expanded amino acid alphabet. Proc. Natl. Acad. Sci. U.S.A., 114, 2017
6DAQ	PhdJ bound to substrate intermediate 分子名称: PhdJ 著者 Medellin, B.P, LeVieux, J.A, Zhang, Y.J, Whitman, C.P. 登録日 2018-05-01 公開日 2019-04-10 最終更新日 2020-01-01 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Structural Characterization of the Hydratase-Aldolases, NahE and PhdJ: Implications for the Specificity, Catalysis, and N-Acetylneuraminate Lyase Subgroup of the Aldolase Superfamily. Biochemistry, 57, 2018
6DAN	PhdJ WT 2 Angstroms resolution 分子名称: CHLORIDE ION, PhdJ 著者 Medellin, B.P, LeVieux, J.A, Zhang, Y.J, Whitman, C.P. 登録日 2018-05-01 公開日 2019-04-10 最終更新日 2024-03-13 実験手法 X-RAY DIFFRACTION (2.047 Å) 主引用文献 Structural Characterization of the Hydratase-Aldolases, NahE and PhdJ: Implications for the Specificity, Catalysis, and N-Acetylneuraminate Lyase Subgroup of the Aldolase Superfamily. Biochemistry, 57, 2018
6DAO	NahE WT selenomethionine 分子名称: Trans-O-hydroxybenzylidenepyruvate hydratase-aldolase 著者 Medellin, B.P, LeVieux, J.A, Zhang, Y.J, Whitman, C.P. 登録日 2018-05-01 公開日 2019-05-08 最終更新日 2020-01-01 実験手法 X-RAY DIFFRACTION (1.939 Å) 主引用文献 Structural Characterization of the Hydratase-Aldolases, NahE and PhdJ: Implications for the Specificity, Catalysis, and N-Acetylneuraminate Lyase Subgroup of the Aldolase Superfamily. Biochemistry, 57, 2018
4LY8	dihydrodipicolinate synthase from C. jejuni with pyruvate bound to the active site 分子名称: 1,2-ETHANEDIOL, 4-hydroxy-tetrahydrodipicolinate synthase, ACETATE ION, ... 著者 Conly, C.J.T. 登録日 2013-07-30 公開日 2015-01-14 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 Tyrosine 110 Plays a Critical Role in Regulating the Allosteric Inhibition of Campylobacter jejuni Dihydrodipicolinate Synthase by Lysine. Biochemistry, 53, 2014
4MLR	dihydrodipicolinate synthase from C. jejuni, Y110F mutation with pyruvate and Lysine 分子名称: 1,2-ETHANEDIOL, ACETATE ION, GLYCEROL, ... 著者 Conly, C.J.T. 登録日 2013-09-06 公開日 2015-01-14 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Tyrosine 110 Plays a Critical Role in Regulating the Allosteric Inhibition of Campylobacter jejuni Dihydrodipicolinate Synthase by Lysine. Biochemistry, 53, 2014
4MPQ	Crystal structure of1-pyrroline-4-hydroxy-2-carboxylate deaminase from Brucella melitensis ATCC 23457 分子名称: 1,2-ETHANEDIOL, Dihydrodipicolinate synthetase 著者 Seattle Structural Genomics Center for Infectious Disease (SSGCID) 登録日 2013-09-13 公開日 2013-09-25 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (1.75 Å) 主引用文献 Crystal structure of1-pyrroline-4-hydroxy-2-carboxylate deaminase from Brucella melitensis ATCC 23457 To be Published
1W3T	Sulfolobus solfataricus 2-keto-3-deoxygluconate (KDG) aldolase complex with D-KDGal, D-Glyceraldehyde and pyruvate 分子名称: 2-KETO-3-DEOXY GLUCONATE ALDOLASE, 3-DEOXY-D-LYXO-HEXONIC ACID, D-Glyceraldehyde, ... 著者 Theodossis, A, Walden, H, Westwick, E.J, Connaris, H, Lamble, H.J, Hough, D.W, Danson, M.J, Taylor, G.L. 登録日 2004-07-19 公開日 2004-09-02 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 The structural basis for substrate promiscuity in 2-keto-3-deoxygluconate aldolase from the Entner-Doudoroff pathway in Sulfolobus solfataricus. J. Biol. Chem., 279, 2004
2YXG	Crystal structure of Dihyrodipicolinate Synthase (dapA) 分子名称: Dihydrodipicolinate synthase 著者 Padmanabhan, B, Bessho, Y, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) 登録日 2007-04-26 公開日 2007-10-30 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Structure of dihydrodipicolinate synthase from Methanocaldococcus jannaschii. Acta Crystallogr.,Sect.F, 65, 2009
3HIJ	Crystal structure of dihydrodipicolinate synthase from Bacillus anthracis in complex with its substrate, pyruvate 分子名称: Dihydrodipicolinate synthase, GLYCEROL, SODIUM ION 著者 Voss, J.E, Scally, S.W, Dobson, R.C.J, Perugini, M.A. 登録日 2009-05-20 公開日 2009-11-24 最終更新日 2011-07-13 実験手法 X-RAY DIFFRACTION (2.15 Å) 主引用文献 Substrate-mediated Stabilization of a Tetrameric Drug Target Reveals Achilles Heel in Anthrax. J.Biol.Chem., 285, 2010
3I7Q	Dihydrodipicolinate synthase mutant - K161A 分子名称: Dihydrodipicolinate synthase, GLYCEROL, PHOSPHATE ION, ... 著者 Dobson, R.C.J, Jameson, G.B, Gerrard, J.A, Soares da Costa, T.P. 登録日 2009-07-08 公開日 2010-04-14 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 How essential is the 'essential' active-site lysine in dihydrodipicolinate synthase? Biochimie, 92, 2010
5CZJ	Crystal structure of HypD, a 1-pyrroline-4-hydroxy-2-carboxylate deaminase from Sinorhizobium meliloti 分子名称: Dihydrodipicolinate synthase 著者 Stogios, P.J, Xu, X, Savchenko, A. 登録日 2015-07-31 公開日 2016-02-03 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (1.92 Å) 主引用文献 l-Hydroxyproline and d-Proline Catabolism in Sinorhizobium meliloti. J.Bacteriol., 198, 2016
3IRD	Structure of dihydrodipicolinate synthase from Clostridium botulinum 分子名称: CHLORIDE ION, D-MALATE, Dihydrodipicolinate synthase, ... 著者 Dobson, R.C.J, Atkinson, S, Perugini, M.A. 登録日 2009-08-22 公開日 2009-09-22 最終更新日 2024-03-20 実験手法 X-RAY DIFFRACTION (2.23 Å) 主引用文献 Structure of Cbot-DHDPS To be Published
2YDA	Sulfolobus sulfataricus 2-keto-3-deoxygluconate aldolase Y103F,Y130F, A198F variant 分子名称: 2-KETO-3-DEOXY GLUCONATE ALDOLASE, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, GLYCEROL, ... 著者 Crennell, S.J, Royer, S.F, Angelopoulou, M, Hough, D.W, Danson, M.J, Bull, S.D. 登録日 2011-03-18 公開日 2012-03-28 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (1.91 Å) 主引用文献 Sulfolobus Sulfataricus 2-Keto-3-Deoxygluconate Aldolase To be Published

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