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6UZ5
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Solution structure of KTI55-Kringle 2 complex
分子名称: M protein, Plasminogen
著者Qiu, C, Yuan, Y, Castellino, F.J.
登録日2019-11-14
公開日2020-12-09
実験手法SOLUTION NMR
主引用文献Structural evolution of the A-domain in plasminogen-binding Group A streptococcal M-protein reflects improved adaptability of the pathogen to the host
To Be Published
6SNW
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BU of 6snw by Molmil
Structure of Coxsackievirus A10 complexed with its receptor KREMEN1
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Capsid protein VP1, Capsid protein VP3, ...
著者Zhao, Y, Zhou, D, Ni, T, Karia, D, Kotecha, A, Wang, X, Rao, Z, Jones, E.Y, Fry, E.E, Ren, J, Stuart, D.I.
登録日2019-08-27
公開日2020-01-15
最終更新日2020-07-29
実験手法ELECTRON MICROSCOPY (3.9 Å)
主引用文献Hand-foot-and-mouth disease virus receptor KREMEN1 binds the canyon of Coxsackie Virus A10.
Nat Commun, 11, 2020
4O03
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Crystal structure of Ca2+ bound prothrombin deletion mutant residues 146-167
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, Prothrombin
著者Pozzi, N, Chen, Z, Shropshire, D.B, Pelc, L.A, Di Cera, E.
登録日2013-12-13
公開日2014-05-21
最終更新日2023-12-06
実験手法X-RAY DIFFRACTION (3.38 Å)
主引用文献The linker connecting the two kringles plays a key role in prothrombin activation.
Proc.Natl.Acad.Sci.USA, 111, 2014
7BZT
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Cryo-EM structure of mature Coxsackievirus A10 in complex with KRM1 at pH 7.4
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Capsid protein VP1, Capsid protein VP2, ...
著者Cui, Y, Peng, R, Song, H, Tong, Z, Gao, G.F, Qi, J.
登録日2020-04-28
公開日2020-07-22
最終更新日2020-08-19
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献Molecular basis of Coxsackievirus A10 entry using the two-in-one attachment and uncoating receptor KRM1.
Proc.Natl.Acad.Sci.USA, 117, 2020
7BZU
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BU of 7bzu by Molmil
Cryo-EM structure of mature Coxsackievirus A10 in complex with KRM1 at pH 5.5
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Capsid protein VP1, Capsid protein VP2, ...
著者Cui, Y, Peng, R, Song, H, Tong, Z, Gao, G.F, Qi, J.
登録日2020-04-28
公開日2020-07-22
最終更新日2020-08-19
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献Molecular basis of Coxsackievirus A10 entry using the two-in-one attachment and uncoating receptor KRM1.
Proc.Natl.Acad.Sci.USA, 117, 2020
4NZQ
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BU of 4nzq by Molmil
Crystal structure of Ca2+-free prothrombin deletion mutant residues 146-167
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Prothrombin
著者Pozzi, N, Chen, Z, Shropshire, D.B, Pelc, L.A, Di Cera, E.
登録日2013-12-12
公開日2014-05-21
最終更新日2023-12-06
実験手法X-RAY DIFFRACTION (2.807 Å)
主引用文献The linker connecting the two kringles plays a key role in prothrombin activation.
Proc.Natl.Acad.Sci.USA, 111, 2014
1A0H
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BU of 1a0h by Molmil
THE X-RAY CRYSTAL STRUCTURE OF PPACK-MEIZOTHROMBIN DESF1: KRINGLE/THROMBIN AND CARBOHYDRATE/KRINGLE/THROMBIN INTERACTIONS AND LOCATION OF THE LINKER CHAIN
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, D-phenylalanyl-N-[(2S,3S)-6-{[amino(iminio)methyl]amino}-1-chloro-2-hydroxyhexan-3-yl]-L-prolinamide, MEIZOTHROMBIN
著者Martin, P.D, Malkowski, M.G, Box, J, Esmon, C.T, Edwards, B.F.P.
登録日1997-11-30
公開日1998-06-17
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献New insights into the regulation of the blood clotting cascade derived from the X-ray crystal structure of bovine meizothrombin des F1 in complex with PPACK.
Structure, 5, 1997
3E6P
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BU of 3e6p by Molmil
Crystal structure of human meizothrombin desF1
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, D-PHENYLALANYL-N-[(1S)-4-{[(Z)-AMINO(IMINO)METHYL]AMINO}-1-(CHLOROACETYL)BUTYL]-L-PROLINAMIDE, Prothrombin, ...
著者Papaconstantinou, M.E, Gandhi, P, Chen, Z, Bah, A, Di Cera, E.
登録日2008-08-15
公開日2008-11-18
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Na(+) binding to meizothrombin desF1.
Cell.Mol.Life Sci., 65, 2008
3K65
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BU of 3k65 by Molmil
Crystal Structure of Prethombin-2/Fragment-2 Complex
分子名称: 1,4-BUTANEDIOL, Prothrombin
著者Adams, T.E, Huntington, J.A.
登録日2009-10-08
公開日2010-09-29
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Structural transitions during prothrombin activation: On the importance of fragment 2.
Biochimie, 122, 2016
4HZH
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Structure of recombinant Gla-domainless prothrombin mutant S525A
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Prothrombin
著者Pozzi, N, Niu, W, Gohara, D.W, Chen, Z, Di Cera, E.
登録日2012-11-15
公開日2013-06-26
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (3.3 Å)
主引用文献Crystal structure of prothrombin reveals conformational flexibility and mechanism of activation.
J.Biol.Chem., 288, 2013
6BJR
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BU of 6bjr by Molmil
Crystal structure of prothrombin mutant S101C/A470C
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, MAGNESIUM ION, Prothrombin, ...
著者Chinnaraj, M, Chen, Z, Pelc, L, Grese, Z, Bystranowska, D, Di Cera, E, Pozzi, N.
登録日2017-11-06
公開日2018-06-27
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (6 Å)
主引用文献Structure of prothrombin in the closed form reveals new details on the mechanism of activation.
Sci Rep, 8, 2018
8UF7
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BU of 8uf7 by Molmil
Cryo-EM structure of POmAb, a Type-I anti-prothrombin antiphospholipid antibody, bound to kringle-1 of human prothrombin
分子名称: POmAb Heavy Chain, POmAb Light Chain, Prothrombin
著者Kumar, S, Summers, B, Basore, K, Pozzi, N.
登録日2023-10-03
公開日2024-02-14
最終更新日2024-05-22
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Cryo-EM structure and functional basis of prothrombin recognition by a type I antiprothrombin antiphospholipid antibody.
Blood, 143, 2024
6C2W
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BU of 6c2w by Molmil
Crystal structure of human prothrombin mutant S101C/A470C
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, MAGNESIUM ION, Prothrombin, ...
著者Chinnaraj, M, Chen, Z, Pelc, L, Grese, Z, Bystranowska, D, Di Cera, E, Pozzi, N.
登録日2018-01-09
公開日2018-02-28
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (4.12 Å)
主引用文献Structure of prothrombin in the closed form reveals new details on the mechanism of activation.
Sci Rep, 8, 2018
2PF1
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BU of 2pf1 by Molmil
STRUCTURE OF BOVINE PROTHROMBIN FRAGMENT 1 REFINED AT 2.25 ANGSTROMS RESOLUTION
分子名称: PROTHROMBIN FRAGMENT 1
著者Seshadri, T.P, Tulinsky, A, Skrzypczak-Jankun, E, Park, C.H.
登録日1992-09-17
公開日1994-01-31
最終更新日2017-11-29
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structure of bovine prothrombin fragment 1 refined at 2.25 A resolution.
J.Mol.Biol., 220, 1991
2PF2
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THE CA+2 ION AND MEMBRANE BINDING STRUCTURE OF THE GLA DOMAIN OF CA-PROTHROMBIN FRAGMENT 1
分子名称: CALCIUM ION, PROTHROMBIN FRAGMENT 1
著者Soriano-Garcia, M, Padmanabhan, K, De vos, A.M, Tulinsky, A.
登録日1991-12-08
公開日1994-01-31
最終更新日2017-11-29
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献The Ca2+ ion and membrane binding structure of the Gla domain of Ca-prothrombin fragment 1.
Biochemistry, 31, 1992
5FWV
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BU of 5fwv by Molmil
Wnt modulator Kremen crystal form III at 3.2A
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, CHLORIDE ION, KREMEN PROTEIN 1
著者Zebisch, M, Jackson, V.A, Jones, E.Y.
登録日2016-02-21
公開日2016-07-20
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Structure of the Dual-Mode Wnt Regulator Kremen1 and Insight Into Ternary Complex Formation with Lrp6 and Dickkopf
Structure, 24, 2016
5FWS
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Wnt modulator Kremen crystal form I at 1.90A
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, KREMEN PROTEIN 1, ...
著者Zebisch, M, Jackson, V.A, Jones, E.Y.
登録日2016-02-21
公開日2016-07-20
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structure of the Dual-Mode Wnt Regulator Kremen1 and Insight Into Ternary Complex Formation with Lrp6 and Dickkopf
Structure, 24, 2016
5FWW
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Wnt modulator Kremen in complex with DKK1 (CRD2) and LRP6 (PE3PE4)
分子名称: CALCIUM ION, DICKKOPF-RELATED PROTEIN 1, KREMEN PROTEIN 1, ...
著者Zebisch, M, Jackson, V.A, Jones, E.Y.
登録日2016-02-21
公開日2016-07-20
最終更新日2016-09-28
実験手法X-RAY DIFFRACTION (3.5 Å)
主引用文献Structure of the Dual-Mode Wnt Regulator Kremen1 and Insight Into Ternary Complex Formation with Lrp6 and Dickkopf
Structure, 24, 2016
5FWU
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Wnt modulator Kremen crystal form II at 2.8A
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, CHLORIDE ION, KREMEN PROTEIN 1
著者Zebisch, M, Jackson, V.A, Jones, E.Y.
登録日2016-02-21
公開日2016-07-20
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structure of the Dual-Mode Wnt Regulator Kremen1 and Insight Into Ternary Complex Formation with Lrp6 and Dickkopf
Structure, 24, 2016
5FWT
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Wnt modulator Kremen crystal form I at 2.10A
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, KREMEN PROTEIN 1, ...
著者Zebisch, M, Jackson, V.A, Jones, E.Y.
登録日2016-02-21
公開日2016-07-20
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structure of the Dual-Mode Wnt Regulator Kremen1 and Insight Into Ternary Complex Formation with Lrp6 and Dickkopf
Structure, 24, 2016
2SPT
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BU of 2spt by Molmil
DIFFERENCES IN THE METAL ION STRUCTURE BETWEEN SR-AND CA-PROTHROMBIN FRAGMENT 1
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, PROTHROMBIN, STRONTIUM ION
著者Tulinsky, A.
登録日1994-02-01
公開日1994-05-31
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Differences in the metal ion structure between Sr- and Ca-prothrombin fragment 1.
Biochemistry, 33, 1994
6OQJ
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BU of 6oqj by Molmil
SOLUTION STRUCTURE OF THE COMPLEX OF MUTANT VEK50[RH1/AA] AND PLASMINOGEN KRINGLE 2
分子名称: Plasminogen kringle 2, Plasminogen-binding group A streptococcal M-like protein PAM
著者Yuan, Y, Castellino, F.J.
登録日2019-04-26
公開日2019-07-24
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Solution structural model of the complex of the binding regions of human plasminogen with its M-protein receptor from Streptococcus pyogenes.
J.Struct.Biol., 208, 2019
6OG4
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plasminogen binding group A streptococcal M protein
分子名称: Plasminogen, Plasminogen-binding group A streptococcal M-like protein PAM, SULFATE ION
著者Law, R.H.P, Quek, A.J, Whisstock, J.C, Caradoc-Davies, T.T.
登録日2019-04-01
公開日2019-07-24
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structure and Function Characterization of the a1a2 Motifs of Streptococcus pyogenes M Protein in Human Plasminogen Binding.
J.Mol.Biol., 431, 2019
6OQK
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SOLUTION STRUCTURE OF THE COMPLEX OF MUTANT VEK50[RH2/AA] AND PLASMINOGEN KRINGLE 2
分子名称: Plasminogen Kringle 2, Plasminogen-binding group A streptococcal M-like protein PAM
著者Yuan, Y, Castellino, F.J.
登録日2019-04-26
公開日2019-07-24
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Solution structural model of the complex of the binding regions of human plasminogen with its M-protein receptor from Streptococcus pyogenes.
J.Struct.Biol., 208, 2019
1NL1
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BOVINE PROTHROMBIN FRAGMENT 1 IN COMPLEX WITH CALCIUM ION
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
著者Huang, M, Huang, G, Furie, B, Seaton, B, Furie, B.C.
登録日2003-01-06
公開日2003-09-16
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structural basis of membrane binding by Gla domains of vitamin K-dependent proteins.
Nat.Struct.Biol., 10, 2003

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