PDB: 325 件ウェブページステータス検索Chemie searchBIRD

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3WJG	Crystal structure of mutant nitrobindin M75L/H76L/Q96C/M148W/H158L (NB10) from Arabidopsis thaliana 分子名称: GLYCEROL, UPF0678 fatty acid-binding protein-like protein At1g79260 著者 Mizohata, E, Fukumoto, K, Onoda, A, Bocola, M, Arlt, M, Inoue, T, Schwaneberg, U, Hayashi, T. 登録日 2013-10-08 公開日 2014-04-02 最終更新日 2024-03-20 実験手法 X-RAY DIFFRACTION (1.1 Å) 主引用文献 A Rhodium Complex-linked Hybrid Biocatalyst: Stereo-controlled Phenylacetylene Polymerization within an Engineered Protein Cavity CHEMCATCHEM, 2014
3WG2	Crystal structure of Agrocybe cylindracea galectin mutant (N46A) 分子名称: Galactoside-binding lectin, TRIETHYLENE GLYCOL 著者 Kuwabara, N, Hu, D, Tateno, H, Makio, H, Hirabayashi, J, Kato, R. 登録日 2013-07-25 公開日 2013-11-27 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Conformational change of a unique sequence in a fungal galectin from Agrocybe cylindracea controls glycan ligand-binding specificity. Febs Lett., 587, 2013
3WD3	Serratia marcescens Chitinase B complexed with azide inhibitor 分子名称: Chitinase B, GLYCEROL, SULFATE ION, ... 著者 Hirose, T, Maita, N, Gouda, H, Koseki, J, Yamamoto, T, Sugawara, A, Nakano, H, Hirono, S, Shiomi, K, Watanabe, T, Taniguchi, H, Sharpless, K.B, Omura, S, Sunazuka, T. 登録日 2013-06-06 公開日 2013-09-18 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Observation of the controlled assembly of preclick components in the in situ click chemistry generation of a chitinase inhibitor Proc.Natl.Acad.Sci.USA, 110, 2013
3WG4	Crystal structure of Agrocybe cylindracea galectin mutant (N46A) with blood type A antigen tetraose 分子名称: DI(HYDROXYETHYL)ETHER, Galactoside-binding lectin, alpha-L-fucopyranose-(1-2)-[2-acetamido-2-deoxy-alpha-D-galactopyranose-(1-3)]beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose 著者 Kuwabara, N, Hu, D, Tateno, H, Makio, H, Hirabayashi, J, Kato, R. 登録日 2013-07-25 公開日 2013-11-27 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 Conformational change of a unique sequence in a fungal galectin from Agrocybe cylindracea controls glycan ligand-binding specificity. Febs Lett., 587, 2013
3WG3	Crystal structure of Agrocybe cylindracea galectin with blood type A antigen tetraose 分子名称: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, Galactoside-binding lectin, ... 著者 Kuwabara, N, Hu, D, Tateno, H, Makio, H, Hirabayashi, J, Kato, R. 登録日 2013-07-25 公開日 2013-11-27 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (1.35 Å) 主引用文献 Conformational change of a unique sequence in a fungal galectin from Agrocybe cylindracea controls glycan ligand-binding specificity. Febs Lett., 587, 2013
3WG1	Crystal structure of Agrocybe cylindracea galectin with lactose 分子名称: Galactoside-binding lectin, beta-D-galactopyranose-(1-4)-beta-D-glucopyranose 著者 Kuwabara, N, Hu, D, Tateno, H, Makio, H, Hirabayashi, J, Kato, R. 登録日 2013-07-25 公開日 2013-11-27 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Conformational change of a unique sequence in a fungal galectin from Agrocybe cylindracea controls glycan ligand-binding specificity. Febs Lett., 587, 2013
3WD4	Serratia marcescens Chitinase B complexed with azide inhibitor and quinoline compound 分子名称: (E)-N-(prop-2-en-1-yloxy)-1-(quinolin-4-yl)methanimine, Chitinase B, GLYCEROL, ... 著者 Hirose, T, Maita, N, Gouda, H, Koseki, J, Yamamoto, T, Sugawara, A, Nakano, H, Hirono, S, Shiomi, K, Watanabe, T, Taniguchi, H, Sharpless, K.B, Omura, S, Sunazuka, T. 登録日 2013-06-06 公開日 2013-09-18 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Observation of the controlled assembly of preclick components in the in situ click chemistry generation of a chitinase inhibitor Proc.Natl.Acad.Sci.USA, 110, 2013
3WD2	Serratia marcescens Chitinase B complexed with azide inhibitor 分子名称: Chitinase B, DITHIANE DIOL, GLYCEROL, ... 著者 Hirose, T, Maita, N, Gouda, H, Koseki, J, Yamamoto, T, Sugawara, A, Nakano, H, Hirono, S, Shiomi, K, Watanabe, T, Taniguchi, H, Sharpless, K.B, Omura, S, Sunazuka, T. 登録日 2013-06-06 公開日 2013-09-18 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Observation of the controlled assembly of preclick components in the in situ click chemistry generation of a chitinase inhibitor Proc.Natl.Acad.Sci.USA, 110, 2013
3WD0	Serratia marcescens Chitinase B, tetragonal form 分子名称: Chitinase B, DITHIANE DIOL, GLYCEROL, ... 著者 Hirose, T, Maita, N, Gouda, H, Koseki, J, Yamamoto, T, Sugawara, A, Nakano, H, Hirono, S, Shiomi, K, Watanabe, T, Taniguchi, H, Sharpless, K.B, Omura, S, Sunazuka, T. 登録日 2013-06-06 公開日 2013-09-18 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 Observation of the controlled assembly of preclick components in the in situ click chemistry generation of a chitinase inhibitor Proc.Natl.Acad.Sci.USA, 110, 2013
4L00	Crystal structure of the apo Jak1 pseudokinase domain 分子名称: Tyrosine-protein kinase JAK1 著者 Toms, A.V, Eck, M.J. 登録日 2013-05-30 公開日 2013-09-04 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Structure of a pseudokinase-domain switch that controls oncogenic activation of Jak kinases. Nat.Struct.Mol.Biol., 20, 2013
4L01	Crystal structure of the V658F apo Jak1 pseudokinase domain 分子名称: Tyrosine-protein kinase JAK1 著者 Toms, A.V, Rogers, J.M, Eck, M.J. 登録日 2013-05-30 公開日 2013-09-04 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Structure of a pseudokinase-domain switch that controls oncogenic activation of Jak kinases. Nat.Struct.Mol.Biol., 20, 2013
4HI3	Crystal structure of dimeric R298A mutant of SARS coronavirus main protease 分子名称: 3C-like proteinase 著者 Wu, C.-G, Chou, C.-Y. 登録日 2012-10-11 公開日 2013-05-01 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (2.09 Å) 主引用文献 Mechanism for controlling the monomer-dimer conversion of SARS coronavirus main protease. Acta Crystallogr.,Sect.D, 69, 2013
3UM7	Crystal structure of the human two pore domain K+ ion channel TRAAK (K2P4.1) 分子名称: POTASSIUM ION, Potassium channel subfamily K member 4 著者 Brohawn, S.G, MacKinnon, R. 登録日 2011-11-12 公開日 2012-02-08 実験手法 X-RAY DIFFRACTION (3.31 Å) 主引用文献 Crystal structure of the human K2P TRAAK, a lipid- and mechano-sensitive K+ ion channel. Science, 335, 2012
5VYG	Crystal structure of hFA9 EGF repeat with O-glucose trisaccharide 分子名称: CALCIUM ION, Coagulation factor IX, alpha-D-xylopyranose-(1-3)-alpha-D-xylopyranose-(1-3)-beta-D-glucopyranose 著者 Yu, H.J, Li, H.L. 登録日 2017-05-25 公開日 2017-08-09 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 O-Glycosylation modulates the stability of epidermal growth factor-like repeats and thereby regulates Notch trafficking J. Biol. Chem., 292, 2017
2YAL	SinR, Master Regulator of biofilm formation in Bacillus subtilis 分子名称: HTH-TYPE TRANSCRIPTIONAL REGULATOR SINR, NICKEL (II) ION 著者 Colledge, V.L, Fogg, M.J, Levdikov, V.M, Leech, A, Dodson, E.J, Wilkinson, A.J. 登録日 2011-02-23 公開日 2011-06-08 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (2.27 Å) 主引用文献 Structure and Organisation of Sinr, the Master Regulator of Biofilm Formation in Bacillus Subtilis. J.Mol.Biol., 411, 2011
8R9R	GDP-bound state of S. putrefaciens FlhF 分子名称: Flagellar biosynthesis protein FlhF, GUANOSINE-5'-DIPHOSPHATE 著者 Mais, C.N, Dornes, A, Bange, G. 登録日 2023-11-30 公開日 2024-03-20 実験手法 X-RAY DIFFRACTION (2.42 Å) 主引用文献 Structure of the GDP-bound state of the SRP GTPase FlhF. Acta Crystallogr.,Sect.F, 80, 2024
6D8Z	Crystal Structure of the C-terminal Guanine Nucleotide Exchange Factor Module of Human Trio 分子名称: Triple functional domain protein 著者 Bandekar, S, Tesmer, J.J. 登録日 2018-04-27 公開日 2019-02-20 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (2.65 Å) 主引用文献 Structure of the C-terminal guanine nucleotide exchange factor module of Trio in an autoinhibited conformation reveals its oncogenic potential. Sci Signal, 12, 2019
5OY5	Monomeric crystal structure of RpBphP1 photosensory core domain from the bacterium Rhodopseudomonas palustris 分子名称: BILIVERDINE IX ALPHA, BphP1 著者 Papiz, M.Z, Bellini, D. 登録日 2017-09-07 公開日 2019-02-06 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (2.6 Å) 主引用文献 Insights into the light-induced molecular switch of the bacteriophytochrome RpBphP1 probed by SAXS, modelling and UV-Vis optical properties To Be Published
5K5B	Wild-type PAS-GAF fragment from Deinococcus radiodurans BphP 分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, 3-[2-[(Z)-[3-(2-carboxyethyl)-5-[(Z)-(4-ethenyl-3-methyl-5-oxidanylidene-pyrrol-2-ylidene)methyl]-4-methyl-pyrrol-1-ium -2-ylidene]methyl]-5-[(Z)-[(3E)-3-ethylidene-4-methyl-5-oxidanylidene-pyrrolidin-2-ylidene]methyl]-4-methyl-1H-pyrrol-3- yl]propanoic acid, ACETATE ION, ... 著者 Takala, H, Edlund, P, Claesson, E, Ihalainen, J.A, Westenhoff, S. 登録日 2016-05-23 公開日 2016-10-26 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (1.35 Å) 主引用文献 The room temperature crystal structure of a bacterial phytochrome determined by serial femtosecond crystallography. Sci Rep, 6, 2016
7QHS	S. cerevisiae CMGE nucleating origin DNA melting 分子名称: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, Cell division control protein 45, ... 著者 Lewis, J.S, Sousa, J.S, Costa, A. 登録日 2021-12-14 公開日 2022-06-15 最終更新日 2022-07-06 実験手法 ELECTRON MICROSCOPY (3.3 Å) 主引用文献 Mechanism of replication origin melting nucleated by CMG helicase assembly. Nature, 606, 2022
3UES	Crystal structure of alpha-1,3/4-fucosidase from Bifidobacterium longum subsp. infantis complexed with deoxyfuconojirimycin 分子名称: (2S,3R,4S,5R)-2-METHYLPIPERIDINE-3,4,5-TRIOL, 1,2-ETHANEDIOL, Alpha-1,3/4-fucosidase, ... 著者 Sakurama, H, Fushinobu, S, Yoshida, E, Honda, Y, Hidaka, M, Ashida, H, Kitaoka, M, Katayama, T, Yamamoto, K, Kumagai, H. 登録日 2011-10-31 公開日 2012-04-04 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 1,3-1,4-alpha-L-fucosynthase that specifically introduces Lewis a/x antigens into type-1/2 chains J.Biol.Chem., 287, 2012
3UET	Crystal structure of alpha-1,3/4-fucosidase from Bifidobacterium longum subsp. infantis D172A/E217A mutant complexed with lacto-N-fucopentaose II 分子名称: 1,2-ETHANEDIOL, Alpha-1,3/4-fucosidase, SODIUM ION, ... 著者 Sakurama, H, Fushinobu, S, Yoshida, E, Honda, Y, Hidaka, M, Ashida, H, Kitaoka, M, Katayama, T, Yamamoto, K, Kumagai, H. 登録日 2011-10-31 公開日 2012-04-04 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 1,3-1,4-alpha-L-fucosynthase that specifically introduces Lewis a/x antigens into type-1/2 chains J.Biol.Chem., 287, 2012
4YWK	Pyrococcus furiosus MCM N-terminal domain with Zinc-binding subdomain B deleted 分子名称: Cell division control protein 21 著者 Froelich, C.A, Enemark, E.J. 登録日 2015-03-20 公開日 2015-09-23 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (1.55 Å) 主引用文献 MCM ring hexamerization is a prerequisite for DNA-binding. Nucleic Acids Res., 43, 2015
4YWL	Pyrococcus furiosus MCM N-terminal domain F179A point mutant pentameric ring 分子名称: Cell division control protein 21, SULFATE ION, ZINC ION 著者 Froelich, C.A, Enemark, E.J. 登録日 2015-03-20 公開日 2015-09-23 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (3.2 Å) 主引用文献 MCM ring hexamerization is a prerequisite for DNA-binding. Nucleic Acids Res., 43, 2015
7L1X	Structure of human CK2 alpha kinase (catalytic subunit) with the inhibitor 108600. 分子名称: (2~{Z})-6-[[2,6-bis(chloranyl)phenyl]methylsulfonyl]-2-[[4-oxidanyl-3-[oxidanyl(oxidanylidene)-$l^{4}-azanyl]phenyl]methylidene]-4~{H}-1,4-benzothiazin-3-one, Casein kinase II subunit alpha, GLYCEROL, ... 著者 Rechkoblit, O, Aggarwal, A.K. 登録日 2020-12-15 公開日 2021-08-11 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Simultaneous CK2/TNIK/DYRK1 inhibition by 108600 suppresses triple negative breast cancer stem cells and chemotherapy-resistant disease. Nat Commun, 12, 2021

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