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1OXE
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Expansion of the Genetic Code Enables Design of a Novel "Gold" Class of Green Fluorescent Proteins
分子名称: cyan fluorescent protein cfp
著者Hyun Bae, J, Rubini, M, Jung, G, Wiegand, G, Seifert, M.H, Azim, M.K, Kim, J.S, Zumbusch, A, Holak, T.A, Moroder, L, Huber, R, Budisa, N.
登録日2003-04-02
公開日2003-12-02
最終更新日2021-10-27
実験手法X-RAY DIFFRACTION (1.15 Å)
主引用文献Expansion of the Genetic Code Enables Design of a Novel "Gold" Class of Green Fluorescent Proteins
J.Mol.Biol., 328, 2003
1OXF
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BU of 1oxf by Molmil
Expansion of the Genetic Code Enables Design of a Novel "Gold" Class of Green Fluorescent Proteins
分子名称: cyan fluorescent protein cfp
著者Hyun Bae, J, Rubini, M, Jung, G, Wiegand, G, Seifert, M.H, Azim, M.K, Kim, J.S, Zumbusch, A, Holak, T.A, Moroder, L, Huber, R, Budisa, N.
登録日2003-04-02
公開日2003-12-02
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.69 Å)
主引用文献Expansion of the Genetic Code Enables Design of a Novel "Gold" Class of Green Fluorescent Proteins
J.Mol.Biol., 328, 2003
1Q4B
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BU of 1q4b by Molmil
S65T Q80R Green Fluorescent Protein (GFP) pH 5.5
分子名称: Green Fluorescent Protein
著者Jain, R.K, Ranganathan, R.
登録日2003-08-02
公開日2004-02-03
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.48 Å)
主引用文献Local complexity of amino acid interactions in a protein core.
Proc.Natl.Acad.Sci.USA, 101, 2004
1Q4E
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BU of 1q4e by Molmil
S65T Q80R Y145C Green Fluorescent Protein (GFP) pH 8.5
分子名称: Green Fluorescent Protein
著者Jain, R.K, Ranganathan, R.
登録日2003-08-02
公開日2004-02-03
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.38 Å)
主引用文献Local complexity of amino acid interactions in a protein core.
Proc.Natl.Acad.Sci.USA, 101, 2004
1Q4A
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BU of 1q4a by Molmil
S65T Q80R Green Fluorescent Protein (GFP) pH 8.5
分子名称: Green Fluorescent Protein
著者Jain, R.K, Ranganathan, R.
登録日2003-08-02
公開日2004-02-03
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献Local complexity of amino acid interactions in a protein core.
Proc.Natl.Acad.Sci.USA, 101, 2004
1Q4D
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BU of 1q4d by Molmil
S65T Q80R T203C Green Fluorescent Protein (GFP) pH 5.5
分子名称: Green Fluorescent Protein
著者Jain, R.K, Ranganathan, R.
登録日2003-08-02
公開日2004-02-03
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.58 Å)
主引用文献Local complexity of amino acid interactions in a protein core.
Proc.Natl.Acad.Sci.USA, 101, 2004
1Q4C
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S65T Q80R T203C Green Fluorescent Protein (GFP) pH 8.5
分子名称: Green Fluorescent Protein
著者Jain, R.K, Ranganathan, R.
登録日2003-08-02
公開日2004-02-03
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Local complexity of amino acid interactions in a protein core.
Proc.Natl.Acad.Sci.USA, 101, 2004
1Q73
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BU of 1q73 by Molmil
S65T Q80R Y145C T203C Green Fluorescent Protein (GFP) pH 8.5
分子名称: Green Fluorescent Protein
著者Jain, R.K, Ranganathan, R.
登録日2003-08-15
公開日2004-02-03
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Local complexity of amino acid interactions in a protein core.
Proc.Natl.Acad.Sci.USA, 101, 2004
1S6Z
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Enhanced Green Fluorescent Protein Containing the Y66L Substitution
分子名称: CHLORIDE ION, green fluorescent protein
著者Rosenow, M.A, Huffman, H.A, Phail, M.E, Wachter, R.M.
登録日2004-01-28
公開日2004-05-04
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献The Crystal Structure of the Y66L Variant of Green Fluorescent Protein Supports a Cyclization-Oxidation-Dehydration Mechanism for Chromophore Maturation(,).
Biochemistry, 43, 2004
1RMM
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Probing the Role of Tryptophans in Aequorea Victoria Green Fluorescent Proteins with an Expanded Genetic Code
分子名称: SIGF1-GFP fusion protein
著者Budisa, N, Pal, P.P, Alefelder, S, Birle, P, Krywcun, T, Rubini, M, Wenger, W, Bae, J.H, Steiner, T.
登録日2003-11-28
公開日2004-06-08
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Probing the role of tryptophans in Aequorea victoria green fluorescent proteins with an expanded genetic code
Biol.Chem., 385, 2004
1RMO
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BU of 1rmo by Molmil
Probing the Role of Tryptophans in Aequorea Victoria Green Fluorescent Proteins with an Expanded Genetic Code
分子名称: wunen-nonfunctional GFP fusion protein
著者Budisa, N, Pal, P.P, Alefelder, S, Birle, P, Krywcun, T, Rubini, M, Wenger, W, Bae, J.H, Steiner, T.
登録日2003-11-28
公開日2004-06-08
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Probing the role of tryptophans in Aequorea victoria green fluorescent proteins with an expanded genetic code
Biol.Chem., 385, 2004
1RRX
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Crystallographic Evidence for Isomeric Chromophores in 3-Fluorotyrosyl-Green Fluorescent Protein
分子名称: SIGF1-GFP fusion protein
著者Bae, J.H, Paramita Pal, P, Moroder, L, Huber, R, Budisa, N.
登録日2003-12-09
公開日2004-06-08
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Crystallographic Evidence for Isomeric Chromophores in 3-Fluorotyrosyl-Green Fluorescent Protein.
Chembiochem, 5, 2004
1RM9
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BU of 1rm9 by Molmil
Probing the Role of Tryptophans in Aequorea Victoria Green Fluorescent Proteins with an Expanded Genetic Code
分子名称: avermectin-sensitive chloride channel GluCl beta/cyan fluorescent protein fusion
著者Budisa, N, Pal, P.P, Alefelder, S, Birle, P, Krywcun, T, Rubini, M, Wenger, W, Bae, J.H, Steiner, T.
登録日2003-11-27
公開日2004-06-08
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Probing the role of tryptophans in Aequorea victoria green fluorescent proteins with an expanded genetic code
Biol.Chem., 385, 2004
1RMP
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BU of 1rmp by Molmil
Probing the Role of Tryptophans in Aequorea Victoria Green Fluorescent Proteins with an Expanded Genetic Code
分子名称: SIGF1-GFP fusion protein
著者Budisa, N, Pal, P.P, Alefelder, S, Birle, P, Krywcun, T, Rubini, M, Wenger, W, Bae, J.H, Steiner, T.
登録日2003-11-28
公開日2004-06-08
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Probing the role of tryptophans in Aequorea victoria green fluorescent proteins with an expanded genetic code
Biol.Chem., 385, 2004
1TWB
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BU of 1twb by Molmil
SspB disulfide crosslinked to an ssrA degradation tag
分子名称: Stringent starvation protein B homolog, ssrA peptide
著者Bolon, D.N, Grant, R.A, Baker, T.A, Sauer, R.T.
登録日2004-06-30
公開日2004-11-16
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Nucleotide-Dependent Substrate Handoff from the SspB Adaptor to the AAA+ ClpXP Protease.
Mol.Cell, 16, 2004
1XQM
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BU of 1xqm by Molmil
Variations on the GFP chromophore scaffold: A fragmented 5-membered heterocycle revealed in the 2.1A crystal structure of a non-fluorescent chromoprotein
分子名称: ACETIC ACID, kindling fluorescent protein
著者Wilmann, P.G, Petersen, J, Devenish, R.J, Prescott, M, Rossjohn, J.
登録日2004-10-13
公開日2004-11-16
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Variations on the GFP chromophore: A polypeptide fragmentation within the chromophore revealed in the 2.1-A crystal structure of a nonfluorescent chromoprotein from Anemonia sulcata
J.Biol.Chem., 280, 2005
1XA9
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Crystal structure of yellow fluorescent protein zFP538 K66M green mutant
分子名称: BETA-MERCAPTOETHANOL, fluorescent protein FP538
著者Remington, S.J, Wachter, R.M, Yarbrough, D.K, Branchaud, B, Anderson, D.C, Kallio, K, Lukyanov, K.A.
登録日2004-08-25
公開日2005-02-08
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献zFP538, a yellow-fluorescent protein from Zoanthus, contains a novel three-ring chromophore.
Biochemistry, 44, 2005
1XAE
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BU of 1xae by Molmil
Crystal structure of wild type yellow fluorescent protein zFP538 from Zoanthus
分子名称: BETA-MERCAPTOETHANOL, fluorescent protein FP538
著者Remington, S.J, Wachter, R.M, Yarbrough, D.K, Branchaud, B, Anderson, D.C, Kallio, K, Lukyanov, K.A.
登録日2004-08-25
公開日2005-02-08
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献zFP538, a yellow-fluorescent protein from Zoanthus, contains a novel three-ring chromophore.
Biochemistry, 44, 2005
1YHI
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BU of 1yhi by Molmil
Uncyclized precursor structure of S65A Y66S R96A GFP variant
分子名称: Green Fluorescent Protein
著者Barondeau, D.P, Kassmann, C.J, Tainer, J.A, Getzoff, E.D.
登録日2005-01-08
公開日2005-02-15
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Understanding GFP Chromophore Biosynthesis: Controlling Backbone Cyclization and Modifying Post-translational Chemistry(,).
Biochemistry, 44, 2005
1YJ2
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Cyclized, non-dehydrated post-translational product for S65A Y66S H148G GFP variant
分子名称: 1,2-ETHANEDIOL, Green Fluorescent Protein, MAGNESIUM ION
著者Barondeau, D.P, Kassmann, C.J, Tainer, J.A, Getzoff, E.D.
登録日2005-01-13
公開日2005-02-15
最終更新日2021-10-20
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Understanding GFP Chromophore Biosynthesis: Controlling Backbone Cyclization and Modifying Post-translational Chemistry.
Biochemistry, 44, 2005
1YJF
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BU of 1yjf by Molmil
Cyclized post-translational product for S65A Y66S (GFPhal) green fluorescent protein variant
分子名称: Green Fluorescent Protein, MAGNESIUM ION
著者Barondeau, D.P, Kassmann, C.J, Tainer, J.A, Getzoff, E.D.
登録日2005-01-14
公開日2005-02-15
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.35 Å)
主引用文献Understanding GFP Chromophore Biosynthesis: Controlling Backbone Cyclization and Modifying Post-translational Chemistry.
Biochemistry, 44, 2005
1YHG
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BU of 1yhg by Molmil
Uncyclized precursor structure of S65G Y66S V68G GFP variant
分子名称: green fluorescent protein
著者Barondeau, D.P, Kassmann, C.J, Tainer, J.A, Getzoff, E.D.
登録日2005-01-07
公開日2005-02-15
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Understanding GFP Chromophore Biosynthesis: Controlling Backbone Cyclization and Modifying Post-translational Chemistry.
Biochemistry, 44, 2005
1YHH
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BU of 1yhh by Molmil
Uncyclized precursor structure of S65A Y66S G67A GFP variant
分子名称: green fluorescent protein
著者Barondeau, D.P, Kassmann, C.J, Tainer, J.A, Getzoff, E.D.
登録日2005-01-07
公開日2005-02-15
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Understanding GFP Chromophore Biosynthesis: Controlling Backbone Cyclization and Modifying Post-translational Chemistry.
Biochemistry, 44, 2005
1Z2Q
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BU of 1z2q by Molmil
High-resolution solution structure of the LM5-1 FYVE domain from Leishmania major
分子名称: LM5-1
著者Mertens, H.D.T, Callaghan, J.M, McConville, M.J, Gooley, P.R.
登録日2005-03-08
公開日2005-04-19
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献A high-resolution solution structure of a trypanosomatid FYVE domain.
Protein Sci., 16, 2007
1XMZ
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Crystal structure of the dark state of kindling fluorescent protein kfp from anemonia sulcata
分子名称: BETA-MERCAPTOETHANOL, GFP-like non-fluorescent chromoprotein FP595 chain 1, GFP-like non-fluorescent chromoprotein FP595 chain 2
著者Quillin, M.L, Anstrom, D.M, Shu, X, O'Leary, S, Kallio, K, Chudakov, D.M, Remington, S.J.
登録日2004-10-04
公開日2005-04-19
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.38 Å)
主引用文献Kindling Fluorescent Protein from Anemonia sulcata: Dark-State Structure at 1.38 Resolution
Biochemistry, 44, 2005

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