PDB: 47720 件ウェブページステータス検索Chemie searchBIRD

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1PP9	Bovine cytochrome bc1 complex with stigmatellin bound 分子名称: 1,2-dioleoyl-sn-glycero-3-phosphoethanolamine, AZIDE ION, CARDIOLIPIN, ... 著者 Huang, L.S, Cobessi, D, Tung, E.Y, Berry, E.A. 登録日 2003-06-16 公開日 2004-07-20 最終更新日 2023-08-16 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Binding of the Respiratory Chain Inhibitor Antimycin to the Mitochondrial bc(1) Complex: A New Crystal Structure Reveals an Altered Intramolecular Hydrogen-bonding Pattern. J.Mol.Biol., 351, 2005
7CZW	S protein of SARS-CoV-2 in complex bound with P5A-2G7 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, IGL c2312_light_IGLV2-14_IGLJ2,IGL@ protein, ... 著者 Yan, R.H, Zhang, Y.Y, Li, Y.N, Zhou, Q. 登録日 2020-09-09 公開日 2021-03-10 最終更新日 2021-05-19 実験手法 ELECTRON MICROSCOPY (2.8 Å) 主引用文献 Structural basis for bivalent binding and inhibition of SARS-CoV-2 infection by human potent neutralizing antibodies. Cell Res., 31, 2021
7D03	S protein of SARS-CoV-2 in complex bound with FabP5A-2G7 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, IGL c2312_light_IGLV2-14_IGLJ2,IGL@ protein, ... 著者 Yan, R.H, Zhang, Y.Y, Li, Y.N, Zhou, Q. 登録日 2020-09-09 公開日 2021-03-10 最終更新日 2021-05-19 実験手法 ELECTRON MICROSCOPY (3.2 Å) 主引用文献 Structural basis for bivalent binding and inhibition of SARS-CoV-2 infection by human potent neutralizing antibodies. Cell Res., 31, 2021
5YKN	crystal structure of Arabidopsis thaliana JMJ14 catalytic domain 分子名称: NICKEL (II) ION, Probable lysine-specific demethylase JMJ14, ZINC ION 著者 Yang, Z, Du, J. 登録日 2017-10-15 公開日 2017-12-27 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Structure of the Arabidopsis JMJ14-H3K4me3 Complex Provides Insight into the Substrate Specificity of KDM5 Subfamily Histone Demethylases. Plant Cell, 30, 2018
7BDQ	MAPK14 bound with SR300 分子名称: 1,2-ETHANEDIOL, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, Mitogen-activated protein kinase 14, ... 著者 Schroeder, M, Roehm, S, Joerger, A, Knapp, S, Structural Genomics Consortium (SGC) 登録日 2020-12-22 公開日 2021-03-03 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (2.75 Å) 主引用文献 Development of a Selective Dual Discoidin Domain Receptor (DDR)/p38 Kinase Chemical Probe. J.Med.Chem., 64, 2021
7BE4	Crystal structure of MAP kinase p38 alpha in complex with inhibitor SR159 分子名称: 5-azanyl-~{N}-[[4-[[(2~{S})-4-cyclohexyl-1-[[(3~{R})-1-methylsulfonylpiperidin-3-yl]amino]-1-oxidanylidene-butan-2-yl]carbamoyl]phenyl]methyl]-1-phenyl-pyrazole-4-carboxamide, Mitogen-activated protein kinase 14 著者 Joerger, A.C, Schroeder, M, Roehm, S, Knapp, S, Structural Genomics Consortium (SGC) 登録日 2020-12-22 公開日 2021-03-03 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Development of a Selective Dual Discoidin Domain Receptor (DDR)/p38 Kinase Chemical Probe. J.Med.Chem., 64, 2021
1SQQ	Crystal Structure Analysis of Bovine Bc1 with Methoxy Acrylate Stilbene (MOAS) 分子名称: Cytochrome b, Cytochrome c1, heme protein, ... 著者 Esser, L, Quinn, B, Li, Y.F, Zhang, M, Elberry, M, Yu, L, Yu, C.A, Xia, D. 登録日 2004-03-19 公開日 2005-10-25 最終更新日 2023-08-23 実験手法 X-RAY DIFFRACTION (3 Å) 主引用文献 Crystallographic studies of quinol oxidation site inhibitors: a modified classification of inhibitors for the cytochrome bc(1) complex. J.Mol.Biol., 341, 2004
7C52	Co-crystal structure of a photosynthetic LH1-RC in complex with electron donor HiPIP 分子名称: (1R)-2-{[{[(2S)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL (11E)-OCTADEC-11-ENOATE, 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, BACTERIOCHLOROPHYLL A, ... 著者 Yu, L.-J, Wang-Otomo, Z.-Y. 登録日 2020-05-18 公開日 2021-03-03 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (2.89 Å) 主引用文献 Crystal structure of a photosynthetic LH1-RC in complex with its electron donor HiPIP. Nat Commun, 12, 2021
2GOF	Three-dimensional structure of the trans-membrane domain of Vpu from HIV-1 in aligned phospholipid bicelles 分子名称: VPU protein 著者 Park, S.H, De Angelis, A.A, Nevzorov, A.A, Wu, C.H, Opella, S.J. 登録日 2006-04-12 公開日 2006-08-08 最終更新日 2024-05-29 実験手法 SOLUTION NMR 主引用文献 Three-Dimensional Structure of the Transmembrane Domain of Vpu from HIV-1 in Aligned Phospholipid Bicelles. Biophys.J., 91, 2006
1SMI	A single mutation of P450 BM3 induces the conformational rearrangement seen upon substrate-binding in wild-type enzyme 分子名称: Bifunctional P-450:NADPH-P450 reductase, PROTOPORPHYRIN IX CONTAINING FE 著者 Joyce, M.G, Girvan, H.M, Munro, A.W, Leys, D. 登録日 2004-03-09 公開日 2004-06-08 最終更新日 2023-08-23 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 A Single Mutation in Cytochrome P450 BM3 Induces the Conformational Rearrangement Seen upon Substrate Binding in the Wild-type Enzyme J.Biol.Chem., 279, 2004
1SMJ	Structure of the A264E mutant of cytochrome P450 BM3 complexed with palmitoleate 分子名称: Bifunctional P-450:NADPH-P450 reductase, PALMITOLEIC ACID, PROTOPORPHYRIN IX CONTAINING FE 著者 Joyce, M.G, Girvan, H.M, Munro, A.W, Leys, D. 登録日 2004-03-09 公開日 2004-06-08 最終更新日 2023-08-23 実験手法 X-RAY DIFFRACTION (2.75 Å) 主引用文献 A Single Mutation in Cytochrome P450 BM3 Induces the Conformational Rearrangement Seen upon Substrate Binding in the Wild-type Enzyme J.Biol.Chem., 279, 2004
2GV7	Structure of Matriptase in Complex with Inhibitor CJ-672 分子名称: (S)-4-(4-(3-(3-CARBAMIMIDOYLPHENYL)-2-(2,4,6-TRIISOPROPYLPHENYLSULFONAMIDO)PROPANOYL)PIPERAZINE-1-CARBONYL)PIPERIDINE-1-CARBOXIMIDAMIDE, Suppressor of tumorigenicity 14 著者 Bode, W. 登録日 2006-05-02 公開日 2006-06-06 最終更新日 2011-07-13 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Secondary Amides of Sulfonylated 3-Amidinophenylalanine. New Potent and Selective Inhibitors of Matriptase. J.Med.Chem., 49, 2006
2GV6	Crystal Structure of Matriptase with Inhibitor CJ-730 分子名称: (S)-3-(3-(4-(2-GUANIDINOETHYL)PIPERIDIN-1-YL)-2-(NAPHTHALENE-2-SULFONAMIDO)-3-OXOPROPYL)BENZIMIDAMIDE, Suppressor of tumorigenicity 14 著者 Bode, W. 登録日 2006-05-02 公開日 2006-06-06 最終更新日 2021-06-23 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Secondary Amides of Sulfonylated 3-Amidinophenylalanine. New Potent and Selective Inhibitors of Matriptase. J.Med.Chem., 49, 2006
1QRX	CRYSTAL STRUCTURE OF WILD-TYPE ALPHA-LYTIC PROTEASE AT 1.6 A, PH 5.14 分子名称: ALPHA-LYTIC PROTEASE, GLYCEROL, SULFATE ION 著者 Derman, A.I, Mau, T, Agard, D.A. 登録日 1999-06-16 公開日 1999-06-18 最終更新日 2011-07-13 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 A Genetic Screen That Targets Specifically the Folding Transition State of Alpha-Lytic Protease To be Published, 1999
7QBZ	Crystal structure Cadmium translocating P-type ATPase 分子名称: Cadmium translocating P-type ATPase, MAGNESIUM ION, TETRAFLUOROALUMINATE ION 著者 Groenberg, C, Hu, Q, Wang, K, Gourdon, P. 登録日 2021-11-21 公開日 2022-03-23 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (3.25 Å) 主引用文献 Structure and ion-release mechanism of P IB-4 -type ATPases. Elife, 10, 2021
7QC0	Crystal structure of Cadmium translocating P-type ATPase 分子名称: BERYLLIUM TRIFLUORIDE ION, Cadmium translocating P-type ATPase, MAGNESIUM ION 著者 Groenberg, C, Hu, Q, Wang, K, Gourdon, P. 登録日 2021-11-21 公開日 2022-03-23 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (3.11 Å) 主引用文献 Structure and ion-release mechanism of P IB-4 -type ATPases. Elife, 10, 2021
7QXX	Proteasome-ZFAND5 Complex Z+E state 分子名称: 26S protease regulatory subunit 6A, 26S protease regulatory subunit 6B, 26S protease regulatory subunit 7, ... 著者 Zhu, Y, Lu, Y. 登録日 2022-01-27 公開日 2023-02-08 最終更新日 2024-09-04 実験手法 ELECTRON MICROSCOPY (4.4 Å) 主引用文献 Molecular mechanism for activation of the 26S proteasome by ZFAND5. Mol.Cell, 83, 2023
7QYB	Proteasome-ZFAND5 Complex Z-C state 分子名称: 26S protease regulatory subunit 4, 26S protease regulatory subunit 6A, 26S protease regulatory subunit 6B, ... 著者 Zhu, Y, Lu, Y. 登録日 2022-01-27 公開日 2023-02-08 最終更新日 2024-09-04 実験手法 ELECTRON MICROSCOPY (4.1 Å) 主引用文献 Molecular mechanism for activation of the 26S proteasome by ZFAND5. Mol.Cell, 83, 2023
7QXU	Proteasome-ZFAND5 Complex Z+C state 分子名称: 26S protease regulatory subunit 6A, 26S protease regulatory subunit 6B, 26S protease regulatory subunit 7, ... 著者 Zhu, Y, Lu, Y. 登録日 2022-01-27 公開日 2023-02-08 最終更新日 2024-09-04 実験手法 ELECTRON MICROSCOPY (4.3 Å) 主引用文献 Molecular mechanism for activation of the 26S proteasome by ZFAND5. Mol.Cell, 83, 2023
4OBF	Crystal Structure of Nelfinavir-Resistant, Inactive HIV-1 Protease Variant (D30N/N88D) in Complex with the p1-p6 substrate variant (S451N) 分子名称: 1,2-ETHANEDIOL, ACETATE ION, GLYCEROL, ... 著者 Kolli, M. 登録日 2014-01-07 公開日 2014-11-26 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (1.68 Å) 主引用文献 HIV-1 protease-substrate coevolution in nelfinavir resistance. J.Virol., 88, 2014
3L72	Chicken cytochrome BC1 complex with kresoxim-I-dimethyl bound 分子名称: 1,2-dioleoyl-sn-glycero-3-phosphoethanolamine, CARDIOLIPIN, CYTOCHROME B, ... 著者 Huang, L, Zhang, Z, Berry, E.A. 登録日 2009-12-27 公開日 2010-02-02 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (3.06 Å) 主引用文献 Famoxadone and related inhibitors bind like methoxy acrylate inhibitors in the Qo site of the BC1 compl and fix the rieske iron-sulfur protein in a positio close to but distinct from that seen with stigmatellin and other "DISTAL" Qo inhibitors. To be Published
3L70	Cytochrome BC1 complex from chicken with trifloxystrobin bound 分子名称: 1,2-dioleoyl-sn-glycero-3-phosphoethanolamine, CARDIOLIPIN, Coenzyme Q10, ... 著者 Huang, L, Berry, E.A. 登録日 2009-12-27 公開日 2010-02-02 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (2.75 Å) 主引用文献 Famoxadone and related inhibitors bind like methoxy acrylate inhibitors in the Qo site of the BC1 compl and fix the rieske iron-sulfur protein in a positio close to but distinct from that seen with stigmatellin and other "distal" Qo inhibitors. To be Published
3L75	Cytochrome BC1 complex from chicken with fenamidone bound 分子名称: (5S)-5-methyl-2-(methylsulfanyl)-5-phenyl-3-(phenylamino)-3,5-dihydro-4H-imidazol-4-one, 1,2-dioleoyl-sn-glycero-3-phosphoethanolamine, AZIDE ION, ... 著者 Huang, L, Berry, E.A. 登録日 2009-12-28 公開日 2010-02-02 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (2.79 Å) 主引用文献 FAMOXADONE AND RELATED INHIBITORS BIND LIKE METHOXY ACRYLATE INHIBITORS IN THE Qo SITE OF THE BC1 COMPL AND FIX THE RIESKE IRON-SULFUR PROTEIN IN A POSITIO CLOSE TO BUT DISTINCT FROM THAT SEEN WITH STIGMATELLIN AND OTHER "DISTAL" Qo INHIBITORS. To be Published
3L71	Cytochrome BC1 complex from chicken with azoxystrobin bound 分子名称: 1,2-dioleoyl-sn-glycero-3-phosphoethanolamine, CARDIOLIPIN, Coenzyme Q10, ... 著者 Huang, L, Berry, E.A. 登録日 2009-12-27 公開日 2010-02-02 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (2.84 Å) 主引用文献 Famoxadone and related inhibitors bind like methoxy acrylate inhibitors in the Qo site of the BC1 compl and fix the rieske iron-sulfur protein in a positio close to but distinct from that seen with stigmatellin and other "DISTAL" Qo inhibitors. To be Published
3L74	Cytochrome BC1 complex from chicken with famoxadone bound 分子名称: 1,2-dioleoyl-sn-glycero-3-phosphoethanolamine, AZIDE ION, CARDIOLIPIN, ... 著者 Huang, L, Berry, E.A. 登録日 2009-12-28 公開日 2010-02-02 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (2.76 Å) 主引用文献 Famoxadone and related inhibitors bind like methoxy acrylate inhibitors in the Qo site of the BC1 compl and fix the rieske iron-sulfur protein in a positio close to but distinct from that seen with stigmatellin and other "DISTAL" Qo inhibitors. To be Published

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