PDB: 41454 件ウェブページステータス検索Chemie searchBIRD

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2XR1	DIMERIC ARCHAEAL CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR WITH N-TERMINAL KH DOMAINS (KH-CPSF) FROM METHANOSARCINA MAZEI 分子名称: CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR 100 KD SUBUNIT, ZINC ION 著者 Mir-Montazeri, B, Ammelburg, M, Forouzan, D, Lupas, A.N, Hartmann, M.D. 登録日 2010-09-08 公開日 2010-10-06 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (2.59 Å) 主引用文献 Crystal Structure of a Dimeric Archaeal Cleavage and Polyadenylation Specificity Factor. J.Struct.Biol., 173, 2011
8RFM	Human NOQ1 enzyme in complex with NADH by serial crystallography 分子名称: FLAVIN-ADENINE DINUCLEOTIDE, NAD(P)H dehydrogenase [quinone] 1, NICOTINAMIDE-ADENINE-DINUCLEOTIDE 著者 Martin-Garcia, J.M, Grieco, A, Medina, M, Boneta, S, Pey, A.L. 登録日 2023-12-13 公開日 2024-05-29 実験手法 X-RAY DIFFRACTION (2.7 Å) 主引用文献 Structural dynamics and functional cooperativity of human NQO1 by ambient temperature serial crystallography and simulations. Protein Sci., 33, 2024
8RFN	Human NOQ1 enzyme in its holo form by serial crystallography 分子名称: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, FLAVIN-ADENINE DINUCLEOTIDE, NAD(P)H dehydrogenase [quinone] 1 著者 Martin-Garcia, J.M, Grieco, A, Medina, M, Boneta, S, Pey, A.L. 登録日 2023-12-13 公開日 2024-05-29 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Structural dynamics and functional cooperativity of human NQO1 by ambient temperature serial crystallography and simulations. Protein Sci., 33, 2024
2YHA	Crystal Structure of the N. crassa QDE-2 AGO MID-PIWI Domains 分子名称: GLYCEROL, POST-TRANSCRIPTIONAL GENE SILENCING PROTEIN QDE-2, SULFATE ION 著者 Boland, A, Weichenrieder, O. 登録日 2011-04-27 公開日 2011-06-15 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (1.85 Å) 主引用文献 Crystal Structure of the Mid-Piwi Lobe of a Eukaryotic Argonaute Protein Proc.Natl.Acad.Sci.USA, 108, 2011
2Y8N	Crystal structure of glycyl radical enzyme 分子名称: 4-HYDROXYPHENYLACETATE DECARBOXYLASE LARGE SUBUNIT, 4-HYDROXYPHENYLACETATE DECARBOXYLASE SMALL SUBUNIT, IRON/SULFUR CLUSTER 著者 Martins, B.M, Blaser, M, Feliks, M, Ullmann, G.M, Selmer, T. 登録日 2011-02-08 公開日 2011-09-21 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (1.75 Å) 主引用文献 Structural Basis for a Kolbe-Type Decarboxylation Catalyzed by a Glycyl Radical Enzyme. J.Am.Chem.Soc., 133, 2011
2YGW	Crystal structure of human MCD 分子名称: 1,2-ETHANEDIOL, MALONYL-COA DECARBOXYLASE, MITOCHONDRIAL, ... 著者 Vollmar, M, Puranik, S, Krojer, T, Savitsky, P, Allerston, C, Yue, W.W, Chaikuad, A, von Delft, F, Gileadi, O, Kavanagh, K, Bountra, C, Arrowsmith, C.H, Weigelt, J, Edwards, A, Oppermann, U. 登録日 2011-04-21 公開日 2012-02-15 最終更新日 2018-01-24 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 Crystal Structures of Malonyl-Coenzyme a Decarboxylase Provide Insights Into its Catalytic Mechanism and Disease-Causing Mutations. Structure, 21, 2013
6ZTH	Phospholipase PlaB from Legionella pneumophila 分子名称: NICOTINAMIDE-ADENINE-DINUCLEOTIDE, PlaB phospholipase 著者 Diwo, M.G, Flieger, A, Blankenfeldt, W. 登録日 2020-07-20 公開日 2021-06-02 最終更新日 2021-06-16 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 NAD(H)-mediated tetramerization controls the activity of Legionella pneumophila phospholipase PlaB. Proc.Natl.Acad.Sci.USA, 118, 2021
2YOP	Long wavelength S-SAD structure of FAM3B PANDER 分子名称: GLYCEROL, PROTEIN FAM3B 著者 Johansson, P, Bernstrom, J, Gorman, T, Oster, L, Backstrom, S, Schweikart, F, Xu, B, Xue, Y, Holmberg Schiavone, L. 登録日 2012-10-26 公開日 2013-01-30 最終更新日 2013-02-20 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Fam3B Pander and Fam3C Ilei Represent a Distinct Class of Signaling Molecules with a Non-Cytokine-Like Fold. Structure, 21, 2013
6ZTI	Phospholipase PlaB from Legionella pneumophila in complex with thio-NAD 分子名称: GLYCEROL, PlaB phospholipase, THIONICOTINAMIDE-ADENINE-DINUCLEOTIDE 著者 Diwo, M.G, Flieger, A, Blankenfeldt, W. 登録日 2020-07-20 公開日 2021-06-02 最終更新日 2024-05-15 実験手法 X-RAY DIFFRACTION (1.81 Å) 主引用文献 NAD(H)-mediated tetramerization controls the activity of Legionella pneumophila phospholipase PlaB. Proc.Natl.Acad.Sci.USA, 118, 2021
3V58	Crystal Structure of the B-phycoerythrin from the red algae Porphyridium Cruentum at pH5 分子名称: PHYCOERYTHROBILIN, Phycoerythrin alpha subunit, Phycoerythrin beta subunit, ... 著者 Camara-Artigas, A. 登録日 2011-12-16 公開日 2012-10-03 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (1.85 Å) 主引用文献 pH-dependent structural conformations of B-phycoerythrin from Porphyridium cruentum Febs J., 279, 2012
8T1D	Open-state cryo-EM structure of full-length human TRPV4 in complex with agonist 4a-PDD 分子名称: (1aR,1bS,4aS,7aS,7bS,8R,9R,9aS)-9a-(decanoyloxy)-4a,7b-dihydroxy-3-(hydroxymethyl)-1,1,6,8-tetramethyl-5-oxo-1a,1b,4,4a,5,7a,7b,8,9,9a-decahydro-1H-cyclopropa[3,4]benzo[1,2-e]azulen-9-yl decanoate, Transient receptor potential cation channel subfamily V member 4/Enhanced green fluorescent protein chimera 著者 Talyzina, I.A, Nadezhdin, K.D, Neuberger, A, Sobolevsky, A.I. 登録日 2023-06-02 公開日 2023-07-05 実験手法 ELECTRON MICROSCOPY (3.35 Å) 主引用文献 Structure of human TRPV4 in complex with GTPase RhoA. Nat Commun, 14, 2023
8T1F	Cryo-EM structure of full-length human TRPV4 in complex with antagonist HC-067047 分子名称: (2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate, 2-methyl-1-[3-(morpholin-4-yl)propyl]-5-phenyl-N-[3-(trifluoromethyl)phenyl]-1H-pyrrole-3-carboxamide, Transient receptor potential cation channel subfamily V member 4/Enhanced green fluorescent protein chimera 著者 Talyzina, I.A, Nadezhdin, K.D, Neuberger, A, Sobolevsky, A.I. 登録日 2023-06-02 公開日 2023-07-05 最終更新日 2024-06-19 実験手法 ELECTRON MICROSCOPY (3.49 Å) 主引用文献 Structure of human TRPV4 in complex with GTPase RhoA. Nat Commun, 14, 2023
8T1B	Cryo-EM structure of full-length human TRPV4 in apo state 分子名称: (2R)-2-{[(4-O-hexopyranosyl-beta-D-glucopyranosyl)oxy]methyl}-4-{[(25R)-5beta,14beta,17beta-spirostan-3beta-yl]oxy}butyl 4-O-alpha-D-glucopyranosyl-beta-D-glucopyranoside, SODIUM ION, Transient receptor potential cation channel subfamily V member 4/Enhanced green fluorescent protein chimera, ... 著者 Nadezhdin, K.D, Talyzina, I.A, Neuberger, A, Sobolevsky, A.I. 登録日 2023-06-02 公開日 2023-07-05 実験手法 ELECTRON MICROSCOPY (3 Å) 主引用文献 Structure of human TRPV4 in complex with GTPase RhoA. Nat Commun, 14, 2023
2Y6V	Peroxisomal alpha-beta-hydrolase Lpx1 (Yor084w) from Saccharomyces cerevisiae (crystal form I) 分子名称: PEROXISOMAL MEMBRANE PROTEIN LPX1, PHOSPHATE ION 著者 Thoms, S, Niemann, H.H. 登録日 2011-01-26 公開日 2011-07-13 最終更新日 2024-05-01 実験手法 X-RAY DIFFRACTION (2.83 Å) 主引用文献 The Unusual Extended C-Terminal Helix of the Peroxisomal Alpha-Beta-Hydrolase Lpx1 is Involved in Dimer Contacts But Dispensable for Dimerization J.Struct.Biol., 175, 2011
8T1C	Cryo-EM structure of human TRPV4 ankyrin repeat domain in complex with GTPase RhoA 分子名称: GUANOSINE-5'-DIPHOSPHATE, Transforming protein RhoA, Transient receptor potential cation channel subfamily V member 4-Enhanced green fluorescent protein chimera 著者 Nadezhdin, K.D, Talyzina, I.A, Neuberger, A, Sobolevsky, A.I. 登録日 2023-06-02 公開日 2023-07-05 実験手法 ELECTRON MICROSCOPY (3.49 Å) 主引用文献 Structure of human TRPV4 in complex with GTPase RhoA. Nat Commun, 14, 2023
8T1E	Closed-state cryo-EM structure of full-length human TRPV4 in the presence of 4a-PDD 分子名称: (2R)-2-{[(4-O-hexopyranosyl-beta-D-glucopyranosyl)oxy]methyl}-4-{[(25R)-5beta,14beta,17beta-spirostan-3beta-yl]oxy}butyl 4-O-alpha-D-glucopyranosyl-beta-D-glucopyranoside, SODIUM ION, Transient receptor potential cation channel subfamily V member 4,Enhanced green fluorescent protein, ... 著者 Talyzina, I.A, Nadezhdin, K.D, Neuberger, A, Sobolevsky, A.I. 登録日 2023-06-02 公開日 2023-07-05 実験手法 ELECTRON MICROSCOPY (2.77 Å) 主引用文献 Structure of human TRPV4 in complex with GTPase RhoA. Nat Commun, 14, 2023
2YAJ	CRYSTAL STRUCTURE OF GLYCYL RADICAL ENZYME with bound substrate 分子名称: 4-HYDROXYPHENYLACETATE, 4-HYDROXYPHENYLACETATE DECARBOXYLASE LARGE SUBUNIT, 4-HYDROXYPHENYLACETATE DECARBOXYLASE SMALL SUBUNIT, ... 著者 Martins, B.M, Blaser, M, Feliks, M, Ullmann, G.M, Selmer, T. 登録日 2011-02-23 公開日 2011-09-21 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (1.813 Å) 主引用文献 Structural Basis for a Kolbe-Type Decarboxylation Catalyzed by a Glycyl Radical Enzyme. J.Am.Chem.Soc., 133, 2011
7K9B	Crystal structure of Bacillus halodurans OapB (native) at 1.2 A 分子名称: CHLORIDE ION, OLE-associated protein B 著者 Yang, Y, Breaker, R.R. 登録日 2020-09-29 公開日 2021-03-03 最終更新日 2024-03-06 実験手法 X-RAY DIFFRACTION (1.202 Å) 主引用文献 Structure of a bacterial OapB protein with its OLE RNA target gives insights into the architecture of the OLE ribonucleoprotein complex. Proc.Natl.Acad.Sci.USA, 118, 2021
7K9C	Crystal structure of Bacillus halodurans OapB (iodine-derivative) at 1.0 A 分子名称: IODIDE ION, OLE-associated protein B 著者 Yang, Y, Breaker, R.R. 登録日 2020-09-29 公開日 2021-03-03 最終更新日 2024-03-06 実験手法 X-RAY DIFFRACTION (1 Å) 主引用文献 Structure of a bacterial OapB protein with its OLE RNA target gives insights into the architecture of the OLE ribonucleoprotein complex. Proc.Natl.Acad.Sci.USA, 118, 2021
7K9D	Crystal structure of Bacillus halodurans OapB in complex with its OLE RNA target (crystal form I) 分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, COBALT HEXAMMINE(III), ... 著者 Yang, Y, Breaker, R.R. 登録日 2020-09-29 公開日 2021-03-03 最終更新日 2024-03-06 実験手法 X-RAY DIFFRACTION (2.098 Å) 主引用文献 Structure of a bacterial OapB protein with its OLE RNA target gives insights into the architecture of the OLE ribonucleoprotein complex. Proc.Natl.Acad.Sci.USA, 118, 2021
7K9E	Crystal structure of Bacillus halodurans OapB in complex with its OLE RNA target (crystal form II) 分子名称: OLE* RNA, OLE-associated protein B 著者 Yang, Y, Breaker, R.R. 登録日 2020-09-29 公開日 2021-03-03 最終更新日 2024-03-06 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Structure of a bacterial OapB protein with its OLE RNA target gives insights into the architecture of the OLE ribonucleoprotein complex. Proc.Natl.Acad.Sci.USA, 118, 2021
7K7J	EphB6 receptor ectodomain 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Ephrin type-B receptor 6 著者 Goldgur, Y, Himanen, J. 登録日 2020-09-22 公開日 2021-04-07 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (3.004 Å) 主引用文献 Structure of the EphB6 receptor ectodomain. Plos One, 16, 2021
7JIZ	ScDLH 分子名称: Dienelactone hydrolase family protein 著者 Schnettler Fernandez, J.D.F, Campbell, E.C, Hollfelder, F.H. 登録日 2020-07-24 公開日 2022-01-26 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (1.85 Å) 主引用文献 ScDLH To Be Published
7T0O	cryoEM reconstruction of the HIV gp140 in complex with the extracellular domains of CD4 and the adnectin domain of Combinectin. The gp140 and CD4 coordinates from entry 6EDU were rigid body fitted to the EM map along withe the crystal structure of CD4+adnectin 分子名称: Adnectin, BG505 SOSIP.664 gp140, T-cell surface glycoprotein CD4 著者 Concha, N.O, William, S.P, Wenzel, D.L. 登録日 2021-11-30 公開日 2022-01-12 実験手法 ELECTRON MICROSCOPY (8.7 Å) 主引用文献 Novel Bent Conformation of CD4 Induced by HIV-1 Inhibitor Indirectly Prevents Productive Viral Attachment. J.Mol.Biol., 434, 2021
7T0R	Crystal structure of the anti-CD4 adnectin 6940_B01 as a complex with the extracellular domains of CD4 and ibalizumab fAb 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Adnectin 6940_B01, Ibalizumab Heavy Chain, ... 著者 Williams, S.P, Concha, N.O, Wensel, D.L, Hong, X. 登録日 2021-11-30 公開日 2022-01-12 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (3.65 Å) 主引用文献 Novel Bent Conformation of CD4 Induced by HIV-1 Inhibitor Indirectly Prevents Productive Viral Attachment. J.Mol.Biol., 434, 2021

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