PDB: 98225 件ウェブページステータス検索Chemie searchBIRD

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4DQS	Binary complex of Bacillus DNA Polymerase I Large Fragment and duplex DNA with rC in primer terminus paired with dG of template 分子名称: CYTIDINE-5'-TRIPHOSPHATE, DNA (5'-D(*GP*A*CP*GP*TP*AP*CP*GP*TP*GP*AP*TP*CP*GP*CP*A)-3'), DNA polymerase, ... 著者 Wang, W, Beese, L.S. 登録日 2012-02-16 公開日 2012-06-06 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (1.66 Å) 主引用文献 Structural factors that determine selectivity of a high fidelity DNA polymerase for deoxy-, dideoxy-, and ribonucleotides. J.Biol.Chem., 287, 2012
6P7K	Structure of HMG-CoA reductase from Burkholderia cenocepacia 分子名称: 3-hydroxy-3-methylglutaryl coenzyme A reductase, ADENOSINE-5'-DIPHOSPHATE, COENZYME A 著者 Walker, A.M, Peacock, R.B, Hicks, C.W, Dewing, S.M, Lewis, K.M, Abboud, J, Stewart, S.W.A, Kang, C, Watson, J.M. 登録日 2019-06-05 公開日 2020-04-08 最終更新日 2023-10-11 実験手法 X-RAY DIFFRACTION (1.722 Å) 主引用文献 Structural and Functional Characterization of Dynamic Oligomerization in Burkholderia cenocepacia HMG-CoA Reductase. Biochemistry, 58, 2019
1H0Y	Structure of Alba: an archaeal chromatin protein modulated by acetylation 分子名称: DNA BINDING PROTEIN SSO10B, SULFATE ION 著者 Wardleworth, B.N, Russell, R.J.M, Bell, S.D, Taylor, G.L, White, M.F. 登録日 2002-07-01 公開日 2002-09-05 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 Structure of Alba: An Archaeal Chromatin Protein Modulated by Acetylation Embo J., 21, 2002
3FM7	Quaternary Structure of Drosophila melanogaster IC/Tctex-1/LC8; Allosteric Interactions of Dynein Light Chains with Dynein Intermediate Chain 分子名称: Dynein intermediate chain, cytosolic, Dynein light chain 1, ... 著者 Hall, J.D, Karplus, P.A, Barbar, E.J. 登録日 2008-12-19 公開日 2009-09-15 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (3.5 Å) 主引用文献 Multivalency in the assembly of intrinsically disordered Dynein intermediate chain. J.Biol.Chem., 284, 2009
7ULI	Apo HMG-CoA Reductase from Arabidopsis thaliana (HMG1) 分子名称: 3-hydroxy-3-methylglutaryl-coenzyme A reductase 1 著者 Haywood, J, Bond, C.S. 登録日 2022-04-05 公開日 2022-05-18 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 A fungal tolerance trait and selective inhibitors proffer HMG-CoA reductase as a herbicide mode-of-action. Nat Commun, 13, 2022
1JU5	Ternary complex of an Crk SH2 domain, Crk-derived phophopeptide, and Abl SH3 domain by NMR spectroscopy 分子名称: Abl, Crk 著者 Donaldson, L.W, Pawson, T, Kay, L.E, Forman-Kay, J.D. 登録日 2001-08-23 公開日 2002-11-06 最終更新日 2024-10-16 実験手法 SOLUTION NMR 主引用文献 Structure of a regulatory complex involving the Abl SH3 domain, the Crk SH2 domain, and a Crk-derived phosphopeptide Proc.Natl.Acad.Sci.USA, 99, 2002
4E0D	Binary complex of Bacillus DNA Polymerase I Large Fragment E658A and duplex DNA 分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, 2'-DEOXYCYTIDINE-5'-TRIPHOSPHATE, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, ... 著者 Wang, W, Beese, L.S. 登録日 2012-03-02 公開日 2012-06-06 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (1.58 Å) 主引用文献 Structural factors that determine selectivity of a high fidelity DNA polymerase for deoxy-, dideoxy-, and ribonucleotides. J.Biol.Chem., 287, 2012
7F67	eIF2B-SFSV NSs-2-eIF2 分子名称: Eukaryotic translation initiation factor 2 subunit 1, Eukaryotic translation initiation factor 2 subunit 3, Non-structural protein NS-S, ... 著者 Kashiwagi, K, Ito, T. 登録日 2021-06-24 公開日 2021-12-01 最終更新日 2024-06-12 実験手法 ELECTRON MICROSCOPY (3.59 Å) 主引用文献 eIF2B-capturing viral protein NSs suppresses the integrated stress response. Nat Commun, 12, 2021
7F66	eIF2B-SFSV NSs-1-eIF2 分子名称: Eukaryotic translation initiation factor 2 subunit 1, Eukaryotic translation initiation factor 2 subunit 3, Non-structural protein NS-S, ... 著者 Kashiwagi, K, Ito, T. 登録日 2021-06-24 公開日 2021-12-01 最終更新日 2024-06-12 実験手法 ELECTRON MICROSCOPY (2.76 Å) 主引用文献 eIF2B-capturing viral protein NSs suppresses the integrated stress response. Nat Commun, 12, 2021
6Z1A	Ternary complex of Staphylococcus aureus DNA gyrase with AMK12 and DNA 分子名称: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, CHLORIDE ION, DIMETHYL SULFOXIDE, ... 著者 Kolaric, A, Germe, T, Hrast, M, Stevenson, C.E.M, Lawson, D.M, Burton, N, Voros, J, Maxwell, A, Minovski, N, Anderluh, M. 登録日 2020-05-13 公開日 2020-11-11 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Potent DNA gyrase inhibitors bind asymmetrically to their target using symmetrical bifurcated halogen bonds. Nat Commun, 12, 2021
6ZH9	Ternary complex CR3022 H11-H4 and RBD (SARS-CoV-2) 分子名称: CR3022 Light chain, CR3022 heavy, Nanobody H11-H4, ... 著者 Naismith, J.H, Mikolajek, H, Le Bas, A. 登録日 2020-06-21 公開日 2020-09-02 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (3.31 Å) 主引用文献 Neutralizing nanobodies bind SARS-CoV-2 spike RBD and block interaction with ACE2. Nat.Struct.Mol.Biol., 27, 2020
6NBW	Ternary Complex of Beta/Gamma-Actin with Profilin and AnCoA-NAA80 分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, ADENOSINE-5'-TRIPHOSPHATE, Actin, ... 著者 Rebowski, G, Boczkowska, M, Dominguez, R. 登録日 2018-12-10 公開日 2020-01-29 最終更新日 2023-10-11 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Mechanism of actin N-terminal acetylation. Sci Adv, 6, 2020
6NAS	Ternary Complex of Ac-Alpha-Actin with Profilin and AcCoA-NAA80 分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, ACETYL COENZYME *A, ADENOSINE-5'-TRIPHOSPHATE, ... 著者 Rebowski, G, Boczkowska, M, Dominguez, R. 登録日 2018-12-06 公開日 2020-01-29 最終更新日 2023-10-11 実験手法 X-RAY DIFFRACTION (2.9 Å) 主引用文献 Mechanism of actin N-terminal acetylation. Sci Adv, 6, 2020
6NBE	Ternary Complex of Ac-Alpha-Actin with Profilin and CoA-NAA80 分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, ADENOSINE-5'-TRIPHOSPHATE, Actin, ... 著者 Rebowski, G, Boczkowska, M, Dominguez, R. 登録日 2018-12-07 公開日 2020-04-15 最終更新日 2023-10-11 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Mechanism of actin N-terminal acetylation. Sci Adv, 6, 2020
3C2L	Ternary complex of DNA POLYMERASE BETA with a C:DAPCPP mismatch in the active site 分子名称: 2'-deoxy-5'-O-[(S)-hydroxy{[(S)-hydroxy(phosphonooxy)phosphoryl]methyl}phosphoryl]adenosine, DNA (5'-D(*DCP*DCP*DGP*DAP*DCP*DCP*DGP*DCP*DGP*DCP*DAP*DTP*DCP*DAP*DGP*DC)-3'), DNA (5'-D(*DGP*DCP*DTP*DGP*DAP*DTP*DGP*DCP*DGP*DC)-3'), ... 著者 Batra, V.K, Beard, W.A, Shock, D.D, Pedersen, L.C, Wilson, S.H. 登録日 2008-01-25 公開日 2008-05-20 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (2.6 Å) 主引用文献 Structures of DNA polymerase beta with active-site mismatches suggest a transient abasic site intermediate during misincorporation. Mol.Cell, 30, 2008
5A5U	Structure of mammalian eIF3 in the context of the 43S preinitiation complex 分子名称: EUKARYOTIC INITIATION FACTOR 3, EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT B, EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT I 著者 des-Georges, A, Dhote, V, Kuhn, L, Hellen, C.U.T, Pestova, T.V, Frank, J, Hashem, Y. 登録日 2015-06-21 公開日 2015-09-09 最終更新日 2024-05-08 実験手法 ELECTRON MICROSCOPY (9 Å) 主引用文献 Structure of Mammalian Eif3 in the Context of the 43S Preinitiation Complex. Nature, 525, 2015
4I2G	Binary complex of mouse TdT with ssDNA 分子名称: 5'-D(P*AP*AP*AP*AP*A)-3', COBALT (II) ION, DNA nucleotidylexotransferase, ... 著者 Gouge, J, Delarue, M. 登録日 2012-11-21 公開日 2013-07-24 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Structures of Intermediates along the Catalytic Cycle of Terminal Deoxynucleotidyltransferase: Dynamical Aspects of the Two-Metal Ion Mechanism. J.Mol.Biol., 425, 2013
4I2A	Binary complex of mouse TdT with ssDNA in absence of divalent transition metal ion 分子名称: 5'-D(*AP*AP*(BRU)P*AP*A)-3', DNA nucleotidylexotransferase, MAGNESIUM ION, ... 著者 Gouge, J, Delarue, M. 登録日 2012-11-21 公開日 2013-07-24 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Structures of Intermediates along the Catalytic Cycle of Terminal Deoxynucleotidyltransferase: Dynamical Aspects of the Two-Metal Ion Mechanism. J.Mol.Biol., 425, 2013
1DKW	CRYSTAL STRUCTURE OF TRIOSE-PHOSPHATE ISOMERASE WITH MODIFIED SUBSTRATE BINDING SITE 分子名称: TERTIARY-BUTYL ALCOHOL, TRIOSEPHOSPHATE ISOMERASE 著者 Norledge, B.V, Lambeir, A.M, Abagyan, R.A, Rottman, A, Fernandez, A.M, Filimonov, V.V, Peter, M.G, Wierenga, R.K. 登録日 1999-12-08 公開日 2000-11-03 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (2.65 Å) 主引用文献 Modeling, mutagenesis, and structural studies on the fully conserved phosphate-binding loop (loop 8) of triosephosphate isomerase: toward a new substrate specificity. Proteins, 42, 2001
4I2F	Binary complex of mouse TdT with ssDNA 分子名称: 5'-D(P*AP*AP*AP*AP*A)-3', DNA nucleotidylexotransferase, MAGNESIUM ION, ... 著者 Gouge, J, Delarue, M. 登録日 2012-11-21 公開日 2013-07-24 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Structures of Intermediates along the Catalytic Cycle of Terminal Deoxynucleotidyltransferase: Dynamical Aspects of the Two-Metal Ion Mechanism. J.Mol.Biol., 425, 2013
4I2I	Binary complex of mouse TdT with AP5A 分子名称: BIS(ADENOSINE)-5'-PENTAPHOSPHATE, DNA nucleotidylexotransferase, MAGNESIUM ION, ... 著者 Gouge, J, Delarue, M. 登録日 2012-11-21 公開日 2013-07-24 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Structures of Intermediates along the Catalytic Cycle of Terminal Deoxynucleotidyltransferase: Dynamical Aspects of the Two-Metal Ion Mechanism. J.Mol.Biol., 425, 2013
4I28	Binary complex of mouse TdT with ssDNA and Zn++ 分子名称: 5'-D(*AP*AP*AP*AP*A)-3', DNA nucleotidylexotransferase, MAGNESIUM ION, ... 著者 Gouge, J, Delarue, M. 登録日 2012-11-21 公開日 2013-07-24 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (2.15 Å) 主引用文献 Structures of Intermediates along the Catalytic Cycle of Terminal Deoxynucleotidyltransferase: Dynamical Aspects of the Two-Metal Ion Mechanism. J.Mol.Biol., 425, 2013
4I2J	Binary complex of mouse TdT with dCTP 分子名称: 2'-DEOXYCYTIDINE-5'-TRIPHOSPHATE, DNA nucleotidylexotransferase, ZINC ION 著者 Gouge, J, Delarue, M. 登録日 2012-11-21 公開日 2013-07-24 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (2.7 Å) 主引用文献 Structures of Intermediates along the Catalytic Cycle of Terminal Deoxynucleotidyltransferase: Dynamical Aspects of the Two-Metal Ion Mechanism. J.Mol.Biol., 425, 2013
1SSZ	Conformational Mapping of Mini-B: An N-terminal/C-terminal Construct of Surfactant Protein B Using 13C-Enhanced Fourier Transform Infrared (FTIR) Spectroscopy 分子名称: Pulmonary surfactant-associated protein B 著者 Waring, A.J, Walther, F.J, Gordon, L.M, Hernandez-Juviel, J.M, Hong, T, Sherman, M.A, Alonso, C, Alig, T, Braun, A, Bacon, D, Zasadzinski, J.A. 登録日 2004-03-24 公開日 2004-06-15 最終更新日 2019-04-24 実験手法 INFRARED SPECTROSCOPY 主引用文献 The role of charged amphipathic helices in the structure and function of surfactant protein B. J.Pept.Res., 66, 2005
4I2D	Binary complex of mouse TdT with AMPcPP 分子名称: DIPHOSPHOMETHYLPHOSPHONIC ACID ADENOSYL ESTER, DNA nucleotidylexotransferase, MAGNESIUM ION, ... 著者 Gouge, J, Delarue, M. 登録日 2012-11-21 公開日 2013-07-24 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Structures of Intermediates along the Catalytic Cycle of Terminal Deoxynucleotidyltransferase: Dynamical Aspects of the Two-Metal Ion Mechanism. J.Mol.Biol., 425, 2013

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