PDB: 45953 件ウェブページステータス検索Chemie searchBIRD

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1MBJ	MOUSE C-MYB DNA-BINDING DOMAIN REPEAT 3 分子名称: MYB PROTO-ONCOGENE PROTEIN 著者 Ogata, K, Morikawa, S, Nakamura, H, Hojo, H, Yoshimura, S, Zhang, R, Aimoto, S, Ametani, Y, Hirata, Z, Sarai, A, Ishii, S, Nishimura, Y. 登録日 1995-05-19 公開日 1995-07-31 最終更新日 2024-06-05 実験手法 SOLUTION NMR 主引用文献 Comparison of the free and DNA-complexed forms of the DNA-binding domain from c-Myb. Nat.Struct.Biol., 2, 1995
1MBG	MOUSE C-MYB DNA-BINDING DOMAIN REPEAT 2 分子名称: MYB PROTO-ONCOGENE PROTEIN 著者 Ogata, K, Morikawa, S, Nakamura, H, Hojo, H, Yoshimura, S, Zhang, R, Aimoto, S, Ametani, Y, Hirata, Z, Sarai, A, Ishii, S, Nishimura, Y. 登録日 1995-05-19 公開日 1995-07-31 最終更新日 2024-06-05 実験手法 SOLUTION NMR 主引用文献 Comparison of the free and DNA-complexed forms of the DNA-binding domain from c-Myb. Nat.Struct.Biol., 2, 1995
4FBT	Dpo4 post-insertion complex with the N-(deoxyguanosin-8-yl)-1-aminopyrene lesion 分子名称: 2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE, CALCIUM ION, DNA polymerase IV, ... 著者 Kirouac, K, Ling, H. 登録日 2012-05-23 公開日 2013-06-12 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Structural mechanism of replication stalling on a bulky amino-polycyclic aromatic hydrocarbon DNA adduct by a y family DNA polymerase. J.Mol.Biol., 425, 2013
1MBK	MOUSE C-MYB DNA-BINDING DOMAIN REPEAT 3 分子名称: MYB PROTO-ONCOGENE PROTEIN 著者 Ogata, K, Morikawa, S, Nakamura, H, Hojo, H, Yoshimura, S, Zhang, R, Aimoto, S, Ametani, Y, Hirata, Z, Sarai, A, Ishii, S, Nishimura, Y. 登録日 1995-05-19 公開日 1995-07-31 最終更新日 2024-06-05 実験手法 SOLUTION NMR 主引用文献 Comparison of the free and DNA-complexed forms of the DNA-binding domain from c-Myb. Nat.Struct.Biol., 2, 1995
4P0Y	Structure of the double stranded DNA binding type IV secretion protein TraN from Enterococcus 分子名称: AM32 著者 Goessweiner-mohr, N, Fercher, C, Keller, W. 登録日 2014-02-23 公開日 2014-07-30 最終更新日 2023-12-27 実験手法 X-RAY DIFFRACTION (1.4 Å) 主引用文献 Structure of the double-stranded DNA-binding type IV secretion protein TraN from Enterococcus. Acta Crystallogr.,Sect.D, 70, 2014
2YPF	Structure of the AvrBs3-DNA complex provides new insights into the initial thymine-recognition mechanism 分子名称: 5'-D(*TP*AP*GP*AP*GP*GP*GP*TP*TP*AP*GP*GP*TP*TP *TP*AP*TP*AP*TP*AP*AP)-3', 5'-D(*TP*TP*TP*AP*TP*AP*TP*AP*AP*AP*CP*CP*TP*AP *AP*CP*CP*CP*TP*CP*TP*AP)-3', AVRBS3 著者 Stella, S, Molina, R, Yefimenko, I, Prieto, J, Silva, G.H, Bertonati, C, Juillerat, A, Duchateau, P, Montoya, G. 登録日 2012-10-30 公開日 2013-08-28 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (2.55 Å) 主引用文献 Structure of the Avrbs3-DNA Complex Provides New Insights Into the Initial Thymine-Recognition Mechanism Acta Crystallogr.,Sect.D, 69, 2013
7OZ3	S. agalactiae BusR in complex with its busA-promotor DNA 分子名称: (2R,3R,3aS,5R,7aR,9R,10R,10aS,12R,14aR)-2,9-bis(6-amino-9H-purin-9-yl)octahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8 ]tetraoxadiphosphacyclododecine-3,5,10,12-tetrol 5,12-dioxide, GntR family transcriptional regulator, pBusA_for, ... 著者 Bandera, A.M, Witte, G. 登録日 2021-06-25 公開日 2021-08-11 最終更新日 2024-07-17 実験手法 ELECTRON MICROSCOPY (4.46 Å) 主引用文献 BusR senses bipartite DNA binding motifs by a unique molecular ruler architecture. Nucleic Acids Res., 49, 2021
5F9N	CRYSTAL STRUCTURE OF HUMAN DNA POLYMERASE ETA INSERTING dCMPNPP ACROSS A DNA TEMPLATE CONTAINING 1,N2-ETHENODEOXYGUANOSINE LESION 分子名称: 2'-deoxy-5'-O-[(R)-hydroxy{[(R)-hydroxy(phosphonooxy)phosphoryl]amino}phosphoryl]cytidine, DNA (5'-D(*AP*GP*CP*GP*TP*CP*AP*T)-3'), DNA (5'-D(*CP*AP*TP*(GNE)P*AP*TP*GP*AP*CP*GP*CP*T)-3'), ... 著者 Patra, A, Egli, M. 登録日 2015-12-09 公開日 2016-12-21 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (2.23 Å) 主引用文献 Bypass of the 1, N2-Ethenodeoxyguanosine Lesion by Human DNA Polymerase Eta To Be Published
4DUL	ANAC019 NAC domain crystal form IV 分子名称: NAC domain-containing protein 19 著者 Lo Leggio, L, Helgstrand, C, Welner, D, Olsen, A.N, Skriver, K. 登録日 2012-02-22 公開日 2012-04-11 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (3 Å) 主引用文献 DNA binding by the plant-specific NAC transcription factors in crystal and solution: a firm link to WRKY and GCM transcription factors. Biochem.J., 444, 2012
4K2J	Decameric ring structure of KSHV (HHV-8) latency-associated nuclear antigen (LANA) DNA binding domain 分子名称: CHLORIDE ION, FORMIC ACID, KSHV (HHV-8) latency-associated nuclear antigen (LANA) 著者 Domsic, J.F, Marmorstein, R. 登録日 2013-04-09 公開日 2013-11-06 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (2.05 Å) 主引用文献 Molecular Basis for Oligomeric-DNA Binding and Episome Maintenance by KSHV LANA. Plos Pathog., 9, 2013
1RXR	HIGH RESOLUTION SOLUTION STRUCTURE OF THE RETINOID X RECEPTOR DNA BINDING DOMAIN, NMR, 20 STRUCTURE 分子名称: RETINOIC ACID RECEPTOR-ALPHA, ZINC ION 著者 Holmbeck, S.M.A, Foster, M.P, Casimiro, D.R, Sem, D.S, Dyson, H.J, Wright, P.E. 登録日 1998-06-12 公開日 1998-11-11 最終更新日 2024-05-01 実験手法 SOLUTION NMR 主引用文献 High-resolution solution structure of the retinoid X receptor DNA-binding domain. J.Mol.Biol., 281, 1998
4BWJ	KlenTaq mutant in complex with DNA and ddCTP 分子名称: 2',3'-DIDEOXYCYTIDINE 5'-TRIPHOSPHATE, 5'-D(*AP*GP*GP*GP*CP*GP*CP*CP*GP*TP*GP*GP*TP*CP)-3', 5'-D(*GP*AP*CP*CP*AP*CP*GP*GP*CP*GP*CP*DOCP)-3', ... 著者 Blatter, N, Bergen, K, Welte, W, Diederichs, K, Marx, A. 登録日 2013-07-03 公開日 2013-09-18 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (1.55 Å) 主引用文献 Structure and Function of an RNA-Reading Thermostable DNA Polymerase. Angew.Chem.Int.Ed.Engl., 52, 2013
2KKF	Solution structure of MLL CXXC domain in complex with palindromic CPG DNA 分子名称: 5'-D(*CP*CP*CP*TP*GP*CP*GP*CP*AP*GP*GP*G)-3', Histone-lysine N-methyltransferase HRX, ZINC ION 著者 Cierpicki, T, Riesbeck, J.E, Grembecka, J.E, Lukasik, S.M, Popovic, R, Omonkowska, M, Shultis, D.S, Zeleznik-Le, N.J, Bushweller, J.H. 登録日 2009-06-18 公開日 2009-12-08 最終更新日 2024-05-22 実験手法 SOLUTION NMR 主引用文献 Structure of the MLL CXXC domain-DNA complex and its functional role in MLL-AF9 leukemia. Nat.Struct.Mol.Biol., 17, 2010
4S0N	Crystal Structure of HLTF HIRAN Domain bound to DNA 分子名称: 5'-D(*TP*TP*TP*TP*TP*TP*TP*TP*TP*T)-3', GLYCEROL, Helicase-like transcription factor, ... 著者 Chavez, D.A, Eichman, B.F. 登録日 2015-01-02 公開日 2015-05-27 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (1.501 Å) 主引用文献 HLTF's Ancient HIRAN Domain Binds 3' DNA Ends to Drive Replication Fork Reversal. Mol.Cell, 58, 2015
1P4W	Solution structure of the DNA-binding domain of the Erwinia amylovora RcsB protein 分子名称: rcsB 著者 Pristovsek, P, Sengupta, K, Loehr, F, Schaefer, B, Wehland von Trebra, M, Rueterjans, H, Bernhard, F. 登録日 2003-04-24 公開日 2003-06-17 最終更新日 2024-05-22 実験手法 SOLUTION NMR 主引用文献 Structural analysis of the DNA-binding domain of the Erwinia amylovora RcsB protein and its interaction with the RcsAB box. J.Biol.Chem., 278, 2003
3QRF	Structure of a domain-swapped FOXP3 dimer 分子名称: Forkhead box protein P3, MAGNESIUM ION, Nuclear factor of activated T-cells, ... 著者 Bandukwala, H.S, Wu, Y, Feurer, M, Chen, Y, Barbosa, B, Ghosh, S, Stroud, J.C, Benoist, C, Mathis, D, Rao, A, Chen, L. 登録日 2011-02-17 公開日 2011-04-20 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 Structure of a Domain-Swapped FOXP3 Dimer on DNA and Its Function in Regulatory T Cells. Immunity, 34, 2011
1TTU	Crystal Structure of CSL bound to DNA 分子名称: 1,2-ETHANEDIOL, 5'-D(*AP*AP*TP*CP*TP*TP*TP*CP*CP*CP*AP*CP*AP*GP*T)-3', 5'-D(*TP*TP*AP*CP*TP*GP*TP*GP*GP*GP*AP*AP*AP*GP*A)-3', ... 著者 Kovall, R.A, Hendrickson, W.A. 登録日 2004-06-23 公開日 2004-08-31 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (2.85 Å) 主引用文献 Crystal structure of the nuclear effector of Notch signaling, CSL, bound to DNA Embo J., 23, 2004
1IV6	Solution Structure of the DNA Complex of Human TRF1 分子名称: 5'-D(*CP*CP*CP*TP*AP*AP*CP*CP*CP*TP*AP*AP*C)-3', 5'-D(*GP*TP*TP*AP*GP*GP*GP*TP*TP*AP*GP*GP*G)-3', TELOMERIC REPEAT BINDING FACTOR 1 著者 Nishikawa, T, Okamura, H, Nagadoi, A, Konig, P, Rhodes, D, Nishimura, Y, RIKEN Structural Genomics/Proteomics Initiative (RSGI) 登録日 2002-03-14 公開日 2002-04-17 最終更新日 2023-12-27 実験手法 SOLUTION NMR 主引用文献 Solution structure of a telomeric DNA complex of human TRF1. Structure, 9, 2001
1OPC	OMPR DNA-BINDING DOMAIN, ESCHERICHIA COLI 分子名称: OMPR 著者 Martinez-Hackert, E, Stock, A.M. 登録日 1996-12-16 公開日 1997-04-01 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (1.95 Å) 主引用文献 The DNA-binding domain of OmpR: crystal structures of a winged helix transcription factor. Structure, 5, 1997
1IRG	INTERFERON REGULATORY FACTOR-2 DNA BINDING DOMAIN, NMR, 20 STRUCTURES 分子名称: INTERFERON REGULATORY FACTOR-2 著者 Furui, J, Uegaki, K, Yamazaki, T, Shirakawa, M, Swindells, M.B, Harada, H, Taniguchi, T, Kyogoku, Y. 登録日 1997-11-25 公開日 1998-03-18 最終更新日 2024-05-01 実験手法 SOLUTION NMR 主引用文献 Solution structure of the IRF-2 DNA-binding domain: a novel subgroup of the winged helix-turn-helix family. Structure, 6, 1998
2MH2	Structural insights into the DNA recognition and protein interaction domains reveal fundamental homologous DNA pairing properties of HOP2 分子名称: Homologous-pairing protein 2 homolog 著者 Moktan, H, Guiraldelli, M.F, Eyter, C.A, Zhao, W, Camerini-Otero, R.D, Sung, P, Zhou, D.H, Pezza, R.J. 登録日 2013-11-13 公開日 2014-04-16 最終更新日 2024-05-01 実験手法 SOLUTION NMR 主引用文献 Solution Structure and DNA-binding Properties of the Winged Helix Domain of the Meiotic Recombination HOP2 Protein. J.Biol.Chem., 289, 2014
1IRF	INTERFERON REGULATORY FACTOR-2 DNA BINDING DOMAIN, NMR, MINIMIZED AVERAGE STRUCTURE 分子名称: INTERFERON REGULATORY FACTOR-2 著者 Furui, J, Uegaki, K, Yamazaki, T, Shirakawa, M, Swindells, M.B, Harada, H, Taniguchi, T, Kyogoku, Y. 登録日 1997-11-24 公開日 1998-01-28 最終更新日 2024-05-01 実験手法 SOLUTION NMR 主引用文献 Solution structure of the IRF-2 DNA-binding domain: a novel subgroup of the winged helix-turn-helix family. Structure, 6, 1998
3ZI5	Crystal STRUCTURE OF RESTRICTION ENDONUCLEASE BFII C-TERMINAL RECOGNITION DOMAIN IN COMPLEX WITH COGNATE DNA 分子名称: 5'-D(*AP*GP*CP*AP*CP*TP*GP*GP*GP*TP*CP*GP)-3', 5'-D(*CP*GP*AP*CP*CP*CP*AP*GP*TP*GP*CP*TP)-3', RESTRICTION ENDONUCLEASE 著者 Golovenko, D, Manakova, E, Zakrys, L, Zaremba, M, Sasnauskas, G, Grazulis, S, Siksnys, V. 登録日 2013-01-03 公開日 2014-01-15 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (3.2 Å) 主引用文献 Structural Insight Into the Specificity of the B3 DNA-Binding Domains Provided by the Co-Crystal Structure of the C-Terminal Fragment of Bfii Restriction Enzyme Nucleic Acids Res., 42, 2014
4L4U	Crystal structure of construct containing A. aeolicus NtrC1 receiver, central and DNA binding domains 分子名称: Transcriptional regulator (NtrC family) 著者 Vidangos, N.K, Maris, A.E, Young, A, Hong, E, Pelton, J.G, Batchelor, J.D, Wemmer, D.E. 登録日 2013-06-09 公開日 2013-08-28 最終更新日 2013-10-23 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Structure, function, and tethering of DNA-binding domains in sigma (54) transcriptional activators. Biopolymers, 99, 2013
7M0C	Post-catalytic nicked complex of DNA Polymerase Lambda with bound mismatched DSB substrate 分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, DNA (5'-D(*CP*AP*GP*TP*GP*CP*T)-3'), ... 著者 Kaminski, A.M, Bebenek, K, Pedersen, L.C, Kunkel, T.A. 登録日 2021-03-10 公開日 2022-03-16 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (2.65 Å) 主引用文献 Comprehensive structural survey of DNA double-strand break synapsis by DNA Polymerase Lambda Not Published

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