PDB: 1732 件ウェブページステータス検索Chemie searchBIRD

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7O72	Yeast RNA polymerase II transcription pre-initiation complex with closed promoter DNA 分子名称: ADENOSINE-5'-DIPHOSPHATE, BERYLLIUM TRIFLUORIDE ION, DNA-directed RNA polymerase II subunit RPB1, ... 著者 Schilbach, S, Aibara, S, Dienemann, C, Grabbe, F, Cramer, P. 登録日 2021-04-12 公開日 2021-06-16 最終更新日 2024-07-10 実験手法 ELECTRON MICROSCOPY (3.4 Å) 主引用文献 Structure of RNA polymerase II pre-initiation complex at 2.9 angstrom defines initial DNA opening. Cell, 184, 2021
7O4K	Yeast TFIIH in the contracted state within the pre-initiation complex 分子名称: ADENOSINE-5'-DIPHOSPHATE, BERYLLIUM TRIFLUORIDE ION, DNA-directed RNA polymerase II subunit RPB1, ... 著者 Schilbach, S, Aibara, S, Dienemann, C, Grabbe, F, Cramer, P. 登録日 2021-04-06 公開日 2021-06-16 最終更新日 2024-07-10 実験手法 ELECTRON MICROSCOPY (3.6 Å) 主引用文献 Structure of RNA polymerase II pre-initiation complex at 2.9 angstrom defines initial DNA opening. Cell, 184, 2021
9FFF	dsDNA-FANCD2-FANCI complex 分子名称: DNA (32-MER), DNA (33-MER), Fanconi anemia complementation group I, ... 著者 Alcon, P, Passmore, L.A. 登録日 2024-05-23 公開日 2024-07-31 最終更新日 2024-10-02 実験手法 ELECTRON MICROSCOPY (3.68 Å) 主引用文献 FANCD2-FANCI surveys DNA and recognizes double- to single-stranded junctions. Nature, 632, 2024
9FFB	ss-dsDNA-FANCD2-FANCI complex 分子名称: DNA (5'-D(P*CP*GP*AP*TP*GP*TP*CP*TP*CP*TP*AP*GP*AP*CP*AP*GP*CP*TP*GP*C)-3'), DNA (5'-D(P*GP*CP*AP*GP*CP*TP*GP*TP*CP*TP*AP*GP*AP*GP*AP*CP*AP*TP*CP*GP*AP*T)-3'), Fanconi anemia complementation group I, ... 著者 Alcon, P, Passmore, L.A. 登録日 2024-05-22 公開日 2024-07-31 最終更新日 2024-10-02 実験手法 ELECTRON MICROSCOPY (3.59 Å) 主引用文献 FANCD2-FANCI surveys DNA and recognizes double- to single-stranded junctions. Nature, 632, 2024
2NB8	Solution structure of C-terminal extramembrane domain of SH protein 分子名称: Small hydrophobic protein 著者 Li, Y, To, J, Surya, W, Torres, J. 登録日 2016-01-26 公開日 2016-02-17 最終更新日 2024-05-15 実験手法 SOLUTION NMR 主引用文献 Inhibition of the human respiratory syncytial virus small hydrophobic protein and structural variations in a bicelle environment. J.Virol., 88, 2014
2NB7	Solution structure of N-terminal extramembrane domain of SH protein 分子名称: Small hydrophobic protein 著者 Li, Y, To, J, Surya, W, Torres, J. 登録日 2016-01-26 公開日 2016-02-17 最終更新日 2024-05-15 実験手法 SOLUTION NMR 主引用文献 Inhibition of the human respiratory syncytial virus small hydrophobic protein and structural variations in a bicelle environment. J.Virol., 88, 2014
7OW8	CryoEM structure of the ABC transporter BmrA E504A mutant in complex with ATP-Mg 分子名称: ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, Multidrug resistance ABC transporter ATP-binding/permease protein BmrA 著者 Gobet, A, Schoehn, G, Falson, P, Chaptal, V. 登録日 2021-06-17 公開日 2022-01-19 最終更新日 2024-07-17 実験手法 ELECTRON MICROSCOPY (3.5 Å) 主引用文献 Substrate-bound and substrate-free outward-facing structures of a multidrug ABC exporter. Sci Adv, 8, 2022
3P87	Structure of human PCNA bound to RNASEH2B PIP box peptide 分子名称: Proliferating cell nuclear antigen, Ribonuclease H2 subunit B 著者 Bubeck, D, Reijns, M.A, Graham, S.C, Astell, K.R, Jones, E.Y, Jackson, A.P. 登録日 2010-10-13 公開日 2011-02-02 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (2.99 Å) 主引用文献 PCNA directs type 2 RNase H activity on DNA replication and repair substrates. Nucleic Acids Res., 39, 2011
3PVS	Structure and biochemical activities of Escherichia coli MgsA 分子名称: PHOSPHATE ION, Replication-associated recombination protein A 著者 Page, A.N, George, N.P, Marceau, A.H, Cox, M.M, Keck, J.L. 登録日 2010-12-07 公開日 2011-02-02 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Structure and Biochemical Activities of Escherichia coli MgsA. J.Biol.Chem., 286, 2011
5DCA	Crystal structure of yeast full length Brr2 in complex with Prp8 Jab1 domain 分子名称: Pre-mRNA-splicing factor 8, Pre-mRNA-splicing helicase BRR2 著者 Absmeier, E, Wollenhaupt, J, Santos, K.F, Wahl, M.C. 登録日 2015-08-23 公開日 2015-12-16 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 The large N-terminal region of the Brr2 RNA helicase guides productive spliceosome activation. Genes Dev., 29, 2015
3QQB	Crystal structure of HA2 R106H mutant of H2 hemagglutinin, neutral pH form 分子名称: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ... 著者 Xu, R, Wilson, I.A. 登録日 2011-02-15 公開日 2011-03-09 最終更新日 2020-07-29 実験手法 X-RAY DIFFRACTION (1.97 Å) 主引用文献 Structural Characterization of an Early Fusion Intermediate of Influenza Virus Hemagglutinin. J.Virol., 85, 2011
3QQE	Crystal structure of HA2 R106H mutant of H2 hemagglutinin, re-neutralized form 分子名称: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ... 著者 Xu, R, Wilson, I.A. 登録日 2011-02-15 公開日 2011-03-09 最終更新日 2020-07-29 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Structural Characterization of an Early Fusion Intermediate of Influenza Virus Hemagglutinin. J.Virol., 85, 2011
3QQI	Crystal structure of the HA1 receptor binding domain of H2 hemagglutinin 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, Hemagglutinin 著者 Xu, R, Wilson, I.A. 登録日 2011-02-15 公開日 2011-03-09 最終更新日 2020-07-29 実験手法 X-RAY DIFFRACTION (1.65 Å) 主引用文献 Structural Characterization of an Early Fusion Intermediate of Influenza Virus Hemagglutinin. J.Virol., 85, 2011
3QQO	Crystal structure of HA2 R106H mutant of H2 hemagglutinin, acidic pH form 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Hemagglutinin 著者 Xu, R, Wilson, I.A. 登録日 2011-02-15 公開日 2011-03-09 最終更新日 2020-07-29 実験手法 X-RAY DIFFRACTION (2.9 Å) 主引用文献 Structural Characterization of an Early Fusion Intermediate of Influenza Virus Hemagglutinin. J.Virol., 85, 2011
4E0X	Crystal structure of the kainate receptor GluK1 ligand-binding domain in complex with kainate in the absence of glycerol 分子名称: 3-(CARBOXYMETHYL)-4-ISOPROPENYLPROLINE, CHLORIDE ION, Glutamate receptor, ... 著者 Frydenvang, K, Kastrup, J.S. 登録日 2012-03-05 公開日 2012-04-25 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Kainate induces various domain closures in AMPA and kainate receptors. Neurochem Int, 61, 2012
4EXP	Structure of mouse Interleukin-34 in complex with mouse FMS 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Interleukin-34, Macrophage colony-stimulating factor 1 receptor 著者 Liu, H, Leo, C, Chen, X, Wong, B.R, Williams, L.T, Lin, H, He, X. 登録日 2012-04-30 公開日 2012-05-30 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 The mechanism of shared but distinct CSF-1R signaling by the non-homologous cytokines IL-34 and CSF-1. Biochim.Biophys.Acta, 1824, 2012
4WVE	Crystal structure of the Staphylococcus aureus SasG G52-E2-G53 module 分子名称: CHLORIDE ION, Surface protein G 著者 Whelan, F, Potts, J.R. 登録日 2014-11-05 公開日 2015-06-03 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 Cooperative folding of intrinsically disordered domains drives assembly of a strong elongated protein. Nat Commun, 6, 2015
7TDZ	Cryo-EM model of protomer of the cytoplasmic ring of the nuclear pore complex from Xenopus laevis 分子名称: Nuclear pore complex protein, Nuclear pore complex protein Nup85, Nuclear pore complex protein Nup96, ... 著者 Fontana, P, Wu, H. 登録日 2022-01-03 公開日 2022-06-22 最終更新日 2024-10-09 実験手法 ELECTRON MICROSCOPY (6.9 Å) 主引用文献 Structure of cytoplasmic ring of nuclear pore complex by integrative cryo-EM and AlphaFold. Science, 376, 2022
6ITC	Structure of a substrate engaged SecA-SecY protein translocation machine 分子名称: (1R)-2-{[{[(2S)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL (11E)-OCTADEC-11-ENOATE, ADENOSINE-5'-DIPHOSPHATE, BERYLLIUM TRIFLUORIDE ION, ... 著者 Ma, C.Y, Wu, X.F, Sun, D.J, Park, E.Y, Rapoport, T.A, Gao, N, Long, L. 登録日 2018-11-21 公開日 2019-06-12 最終更新日 2023-11-15 実験手法 ELECTRON MICROSCOPY (3.45 Å) 主引用文献 Structure of the substrate-engaged SecA-SecY protein translocation machine. Nat Commun, 10, 2019
6LDI	The cryo-EM structure of E. coli CueR transcription activation complex 分子名称: DNA (50-MER), DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, ... 著者 Fang, C.L, Zhang, Y. 登録日 2019-11-21 公開日 2020-09-30 最終更新日 2024-03-27 実験手法 ELECTRON MICROSCOPY (3.69 Å) 主引用文献 CueR activates transcription through a DNA distortion mechanism. Nat.Chem.Biol., 17, 2021
1LWJ	CRYSTAL STRUCTURE OF T. MARITIMA 4-ALPHA-GLUCANOTRANSFERASE/ACARBOSE COMPLEX 分子名称: 4-ALPHA-GLUCANOTRANSFERASE, CALCIUM ION, MODIFIED ACARBOSE PENTASACCHARIDE 著者 Roujeinikova, A, Raasch, C, Sedelnikova, S, Liebl, W, Rice, D.W. 登録日 2002-05-31 公開日 2002-08-14 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 CRYSTAL STRUCTURE OF THERMOTOGA MARITIMA 4-ALPHA-GLUCANOTRANSFERASE AND ITS ACARBOSE COMPLEX: IMPLICATIONS FOR SUBSTRATE SPECIFICITY AND CATALYSIS J.Mol.Biol., 321, 2002
1LWH	CRYSTAL STRUCTURE OF T. MARITIMA 4-ALPHA-GLUCANOTRANSFERASE 分子名称: 4-alpha-glucanotransferase, CALCIUM ION 著者 Roujeinikova, A, Raasch, C, Sedelnikova, S, Liebl, W, Rice, D.W. 登録日 2002-05-31 公開日 2002-07-03 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (2.6 Å) 主引用文献 CRYSTAL STRUCTURE OF THERMOTOGA MARITIMA 4-ALPHA-GLUCANOTRANSFERASE AND ITS ACARBOSE COMPLEX: IMPLICATIONS FOR SUBSTRATE SPECIFICITY AND CATALYSIS J.Mol.Biol., 321, 2002
3T0P	Crystal structure of a Putative DNA polymerase III beta subunit (EUBREC_0002; ERE_29750) from Eubacterium rectale ATCC 33656 at 2.26 A resolution 分子名称: 1,2-ETHANEDIOL, ACETATE ION, CHLORIDE ION, ... 著者 Joint Center for Structural Genomics (JCSG) 登録日 2011-07-20 公開日 2011-08-10 最終更新日 2023-02-01 実験手法 X-RAY DIFFRACTION (2.26 Å) 主引用文献 Crystal structure of a Putative DNA polymerase III beta subunit (EUBREC_0002; ERE_29750) from Eubacterium rectale ATCC 33656 at 2.26 A resolution To be published
4M81	The structure of E292S glycosynthase variant of exo-1,3-beta-glucanase from Candida albicans complexed with 1-fluoro-alpha-D-glucopyranoside (donor) and p-nitrophenyl beta-D-glucopyranoside (acceptor) at 1.86A resolution 分子名称: 4-nitrophenyl beta-D-glucopyranoside, EXO-1,3-BETA-GLUCANASE, GLYCEROL, ... 著者 Nakatani, Y, Cutfield, S.M, Larsen, D.S, Cutfield, J.F. 登録日 2013-08-12 公開日 2014-06-25 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (1.86 Å) 主引用文献 Major Change in Regiospecificity for the Exo-1,3-beta-glucanase from Candida albicans following Its Conversion to a Glycosynthase. Biochemistry, 53, 2014
4M82	The structure of E292S glycosynthase variant of exo-1,3-beta-glucanase from Candida albicans complexed with p-nitrophenyl-gentiobioside (product) at 1.6A resolution 分子名称: 1,2-ETHANEDIOL, 4-nitrophenyl 6-O-beta-D-glucopyranosyl-beta-D-glucopyranoside, EXO-1,3-BETA-GLUCANASE, ... 著者 Nakatani, Y, Cutfield, S.M, Larsen, D.S, Cutfield, J.F. 登録日 2013-08-12 公開日 2014-06-25 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (1.592 Å) 主引用文献 Major Change in Regiospecificity for the Exo-1,3-beta-glucanase from Candida albicans following Its Conversion to a Glycosynthase. Biochemistry, 53, 2014

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