Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

6P00
DownloadVisualize
BU of 6p00 by Molmil
RebH Variant 8F, Tryptamine 6-halogenase
分子名称: FLAVIN-ADENINE DINUCLEOTIDE, Flavin-dependent tryptophan halogenase RebH
著者Andorfer, M.C, Sukumar, N, Lewis, J.C.
登録日2019-05-16
公開日2020-05-27
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.249 Å)
主引用文献Structural and Computational Analysis of Laboratory-Evolved Halogenases Reveals Molecular Details of Site-Selectivity
To Be Published
6V83
DownloadVisualize
BU of 6v83 by Molmil
Crystal structure of CTX-M-14 E166A/P167S/D240G beta-lactamase in complex with ceftazidime-1
分子名称: ACYLATED CEFTAZIDIME, Beta-lactamase
著者Brown, C.A, Hu, L, Sankaran, B, Prasad, B.V.V, Palzkill, T.G.
登録日2019-12-10
公開日2020-04-22
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Antagonism between substitutions in beta-lactamase explains a path not taken in the evolution of bacterial drug resistance.
J.Biol.Chem., 295, 2020
6V6G
DownloadVisualize
BU of 6v6g by Molmil
Crystal structure of CTX-M-14 E166A/P167S/D240G beta-lactamase
分子名称: Beta-lactamase, DI(HYDROXYETHYL)ETHER, SODIUM ION
著者Brown, C.A, Hu, L, Sankaran, B, Prasad, B.V.V, Palzkill, T.G.
登録日2019-12-05
公開日2020-04-22
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Antagonism between substitutions in beta-lactamase explains a path not taken in the evolution of bacterial drug resistance.
J.Biol.Chem., 295, 2020
6V6P
DownloadVisualize
BU of 6v6p by Molmil
Crystal structure of CTX-M-14 E166A/D240G beta-lactamase
分子名称: Beta-lactamase, DI(HYDROXYETHYL)ETHER, SULFATE ION
著者Brown, C.A, Hu, L, Sankaran, B, Prasad, B.V.V, Palzkill, T.G.
登録日2019-12-05
公開日2020-04-22
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Antagonism between substitutions in beta-lactamase explains a path not taken in the evolution of bacterial drug resistance.
J.Biol.Chem., 295, 2020
7B73
DownloadVisualize
BU of 7b73 by Molmil
Insight into the molecular determinants of thermal stability in halohydrin dehalogenase HheD2.
分子名称: 2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID, GLYCEROL, Short-chain dehydrogenase/reductase SDR
著者Wessel, J, Petrillo, G, Estevez, M, Bosh, S, Seeger, M, Dijkman, W.P, Hidalgo, A, Uson, I, Osuna, S, Schallmey, A.
登録日2020-12-09
公開日2021-04-07
最終更新日2024-06-19
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Insights into the molecular determinants of thermal stability in halohydrin dehalogenase HheD2.
Febs J., 288, 2021
6V7T
DownloadVisualize
BU of 6v7t by Molmil
Crystal structure of CTX-M-14 E166A/D240G beta-lactamase in complex with ceftazidime
分子名称: ACYLATED CEFTAZIDIME, Beta-lactamase
著者Brown, C.A, Hu, L, Sankaran, B, Prasad, B.V.V, Palzkill, T.G.
登録日2019-12-09
公開日2020-04-22
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.34 Å)
主引用文献Antagonism between substitutions in beta-lactamase explains a path not taken in the evolution of bacterial drug resistance.
J.Biol.Chem., 295, 2020
4UUI
DownloadVisualize
BU of 4uui by Molmil
A case study for twinned data analysis: multiple crystal forms of the enzyme N-acetyl-neuraminic lyase
分子名称: N-ACETYLNEURAMINATE LYASE, PENTAETHYLENE GLYCOL, PYRUVIC ACID, ...
著者Campeotto, I, Phillips, S.E.V, Pearson, A.R.
登録日2014-07-29
公開日2015-08-12
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.79 Å)
主引用文献A Case Study for Twinned Data Analysis: Multiple Crystal Forms of the Enzyme N-Acetyl-Neuraminic Lyase
To be Published
8AIS
DownloadVisualize
BU of 8ais by Molmil
Crystal structure of cutinase PsCut from Pseudomonas saudimassiliensis
分子名称: ACETATE ION, Lipase 1
著者Zahn, M, Allen, M.D, Pickford, A.R, McGeehan, J.E.
登録日2022-07-27
公開日2023-03-08
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.56 Å)
主引用文献Concentration-Dependent Inhibition of Mesophilic PETases on Poly(ethylene terephthalate) Can Be Eliminated by Enzyme Engineering.
ChemSusChem, 16, 2023
8JIF
DownloadVisualize
BU of 8jif by Molmil
Cryo-EM Structure of 3-axis block of AAV9P31-Car4 complex
分子名称: Capsid protein VP1, Carbonic anhydrase 4, ZINC ION
著者Zhang, R, Liu, Y, Lou, Z.
登録日2023-05-26
公開日2024-01-31
最終更新日2024-02-28
実験手法ELECTRON MICROSCOPY (2.28 Å)
主引用文献Structural basis of the recognition of adeno-associated virus by the neurological system-related receptor carbonic anhydrase IV.
Plos Pathog., 20, 2024
7UD4
DownloadVisualize
BU of 7ud4 by Molmil
Cryo-EM structure of AAV-PHP.eB
分子名称: Capsid protein VP1
著者Jang, S, Shen, H.K, Ding, X, Miles, T.F, Gradinaru, V.
登録日2022-03-18
公開日2022-09-21
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (2.24 Å)
主引用文献Structural basis of receptor usage by the engineered capsid AAV-PHP.eB.
Mol Ther Methods Clin Dev, 26, 2022
6RXQ
DownloadVisualize
BU of 6rxq by Molmil
Crystal structure of CobB Ac2 (A76G,I131C,V162A) in complex with H4K16Cr-2'OH-ADPr peptide intermediate after soaking
分子名称: Histone H4, NAD-dependent protein deacylase, [[(2~{R},3~{S},4~{R},5~{R})-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl] [(2~{R},3~{R},4~{R},5~{S})-4-[(~{E})-but-2-enoxy]-3,5-bis(oxidanyl)oxolan-2-yl]methyl hydrogen phosphate
著者Spinck, M, Gasper, R, Neumann, H.
登録日2019-06-08
公開日2020-04-15
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Evolved, Selective Erasers of Distinct Lysine Acylations.
Angew.Chem.Int.Ed.Engl., 59, 2020
4X0K
DownloadVisualize
BU of 4x0k by Molmil
Engineered Fab fragment specific for EYMPME (EE) peptide
分子名称: Fab fragment heavy chain, Fab fragment light chain
著者Johnson, J.L, Lieberman, R.L.
登録日2014-11-21
公開日2015-04-08
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.04 Å)
主引用文献Structural and biophysical characterization of an epitope-specific engineered Fab fragment and complexation with membrane proteins: implications for co-crystallization.
Acta Crystallogr.,Sect.D, 71, 2015
6AML
DownloadVisualize
BU of 6aml by Molmil
Phosphotriesterase variant S8
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, CACODYLATE ION, Phosphotriesterase, ...
著者Miton, C.M, Campbell, E.C, Jackson, C.J, Tokuriki, N.
登録日2017-08-09
公開日2018-08-08
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.46 Å)
主引用文献Phosphotriesterase variant S8
To Be Published
6RXK
DownloadVisualize
BU of 6rxk by Molmil
Crystal structure of CobB wt in complex with H4K16-Butyryl peptide
分子名称: Histone H4, NAD-dependent protein deacylase, ZINC ION
著者Spinck, M, Gasper, R, Neumann, H.
登録日2019-06-08
公開日2020-04-15
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.35 Å)
主引用文献Evolved, Selective Erasers of Distinct Lysine Acylations.
Angew.Chem.Int.Ed.Engl., 59, 2020
6RXS
DownloadVisualize
BU of 6rxs by Molmil
Crystal structure of CobB Ac3(A76G,Y92A, I131L, V187Y) in complex with H4K16-Acetyl peptide
分子名称: GLYCEROL, Histone H4, NAD-dependent protein deacylase, ...
著者Spinck, M, Gasper, R, Neumann, H.
登録日2019-06-08
公開日2020-04-15
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.599 Å)
主引用文献Evolved, Selective Erasers of Distinct Lysine Acylations.
Angew.Chem.Int.Ed.Engl., 59, 2020
6RXL
DownloadVisualize
BU of 6rxl by Molmil
Crystal structure of CobB wt in complex with H4K16-Crotonyl peptide
分子名称: Histone H4, NAD-dependent protein deacylase, ZINC ION
著者Spinck, M, Gasper, R, Neumann, H.
登録日2019-06-08
公開日2020-04-15
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Evolved, Selective Erasers of Distinct Lysine Acylations.
Angew.Chem.Int.Ed.Engl., 59, 2020
6RXR
DownloadVisualize
BU of 6rxr by Molmil
Crystal structure of CobB Ac2 (A76G, I131C, V162G) in complex with H4K16Cr-2'OH-ADPr peptide intermediate after co-crystallisation
分子名称: Histone H4, NAD-dependent protein deacylase, [[(2~{R},3~{S},4~{R},5~{R})-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl] [(2~{R},3~{R},4~{R},5~{S})-4-[(~{E})-but-2-enoxy]-3,5-bis(oxidanyl)oxolan-2-yl]methyl hydrogen phosphate
著者Spinck, M, Gasper, R, Neumann, H.
登録日2019-06-08
公開日2020-04-15
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Evolved, Selective Erasers of Distinct Lysine Acylations.
Angew.Chem.Int.Ed.Engl., 59, 2020
6RXP
DownloadVisualize
BU of 6rxp by Molmil
Crystal structure of CobB Ac2 (A76G,I131C,V162A) in complex with H4K16-Crotonyl peptide
分子名称: Histone H4, NAD-dependent protein deacylase, ZINC ION
著者Spinck, M, Gasper, R, Neumann, H.
登録日2019-06-08
公開日2020-04-15
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Evolved, Selective Erasers of Distinct Lysine Acylations.
Angew.Chem.Int.Ed.Engl., 59, 2020
6B2F
DownloadVisualize
BU of 6b2f by Molmil
Phosphotriesterase variant S5 + TS analogue
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, Phosphotriesterase, ZINC ION, ...
著者Miton, C.M, Campbell, E.C, Jackson, C.J, Tokuriki, N.
登録日2017-09-20
公開日2019-01-23
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.775 Å)
主引用文献Phosphotriesterase variant S5 + TS analogue
To Be Published
6RXO
DownloadVisualize
BU of 6rxo by Molmil
Crystal structure of CobB Ac2 (A76G, I131C, V162A) in complex with H4K16-Buturyl peptide
分子名称: Histone H4, NAD-dependent protein deacylase, ZINC ION
著者Spinck, M, Gasper, R, Neumann, H.
登録日2019-06-08
公開日2020-04-15
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Evolved, Selective Erasers of Distinct Lysine Acylations.
Angew.Chem.Int.Ed.Engl., 59, 2020
8P7I
DownloadVisualize
BU of 8p7i by Molmil
The impact of molecular variants, crystallization conditions and space group on structure-ligand complexes: A case study on Bacterial Phosphotriesterase Variants and complexes
分子名称: (2~{S},6~{R})-2,6-dimethyl-1,3-dioxane-4,4-diol, FORMIC ACID, Parathion hydrolase, ...
著者Dym, O, Aggarwal, N, Ashani, Y, Albeck, S, Unger, T, Hamer Rogotner, S, Silman, I, Sussman, J.L.
登録日2023-05-30
公開日2023-10-25
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献The impact of molecular variants, crystallization conditions and the space group on ligand-protein complexes: a case study on bacterial phosphotriesterase.
Acta Crystallogr D Struct Biol, 79, 2023
8P7S
DownloadVisualize
BU of 8p7s by Molmil
The impact of molecular variants, crystallization conditions and space group on structure-ligand complexes: A case study on Bacterial Phosphotriesterase Variants and complexes
分子名称: 1,2-ETHANEDIOL, 1-ethyl-1-methyl-cyclohexane, FORMIC ACID, ...
著者Dym, O, Aggarwal, N, Ashani, Y, Albeck, S, Unger, T, Hamer Rogotner, S, Silman, I, Sussman, J.L.
登録日2023-05-31
公開日2023-10-25
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.77 Å)
主引用文献The impact of molecular variants, crystallization conditions and the space group on ligand-protein complexes: a case study on bacterial phosphotriesterase.
Acta Crystallogr D Struct Biol, 79, 2023
8P7N
DownloadVisualize
BU of 8p7n by Molmil
The impact of molecular variants, crystallization conditions and space group on structure-ligand complexes: A case study on Bacterial Phosphotriesterase Variants and complexes
分子名称: FORMIC ACID, Parathion hydrolase, ZINC ION
著者Dym, O, Aggarwal, N, Ashani, Y, Albeck, S, Unger, T, Hamer Rogotner, S, Silman, I, Sussman, J.L.
登録日2023-05-30
公開日2023-10-25
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献The impact of molecular variants, crystallization conditions and the space group on ligand-protein complexes: a case study on bacterial phosphotriesterase.
Acta Crystallogr D Struct Biol, 79, 2023
8P7V
DownloadVisualize
BU of 8p7v by Molmil
The impact of molecular variants, crystallization conditions and space group on structure-ligand complexes: A case study on Bacterial Phosphotriesterase Variants and complexes
分子名称: 1,2-ETHANEDIOL, 1-ethyl-1-methyl-cyclohexane, FORMIC ACID, ...
著者Dym, O, Aggawal, N, Ashani, Y, Albeck, S, Unger, T, Hamer Rogotner, S, Silman, I, Sussman, J.L.
登録日2023-05-31
公開日2023-10-25
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.737 Å)
主引用文献The impact of molecular variants, crystallization conditions and the space group on ligand-protein complexes: a case study on bacterial phosphotriesterase.
Acta Crystallogr D Struct Biol, 79, 2023
8P7Q
DownloadVisualize
BU of 8p7q by Molmil
The impact of molecular variants, crystallization conditions and space group on structure-ligand complexes: A case study on Bacterial Phosphotriesterase Variants and complexes
分子名称: 1-ethyl-1-methyl-cyclohexane, FORMIC ACID, GLYCEROL, ...
著者Dym, O, Aggarwal, N, Ashani, Y, Albeck, S, Unger, T, Hamer Rogotner, S, Silman, I, Sussman, J.L.
登録日2023-05-30
公開日2023-10-25
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.77 Å)
主引用文献The impact of molecular variants, crystallization conditions and the space group on ligand-protein complexes: a case study on bacterial phosphotriesterase.
Acta Crystallogr D Struct Biol, 79, 2023

222926

件を2024-07-24に公開中

PDB statisticsPDBj update infoContact PDBjnumon