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1HMV
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THE STRUCTURE OF UNLIGANDED REVERSE TRANSCRIPTASE FROM THE HUMAN IMMUNODEFICIENCY VIRUS TYPE 1
分子名称: HIV-1 REVERSE TRANSCRIPTASE (SUBUNIT P51), HIV-1 REVERSE TRANSCRIPTASE (SUBUNIT P66), MAGNESIUM ION
著者Rodgers, D.W, Gamblin, S.J, Harris, B.A, Ray, S, Culp, J.S, Hellmig, B, Woolf, D.J, Debouck, C, Harrison, S.C.
登録日1994-12-15
公開日1995-03-31
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献The structure of unliganded reverse transcriptase from the human immunodeficiency virus type 1.
Proc.Natl.Acad.Sci.USA, 92, 1995
1P5N
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Solution Structure of HCV IRES Domain IIb
分子名称: 34-MER
著者Lukavsky, P.J, Kim, I, Otto, G.A, Puglisi, J.D.
登録日2003-04-27
公開日2003-11-04
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Structure of HCV IRES domain II determined by NMR.
Nat.Struct.Biol., 10, 2003
2JZE
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NMR structure of the domain 527-651 of the SARS-CoV nonstructural protein nsp3, single conformer closest to the mean coordinates of an ensemble of twenty energy minimized conformers
分子名称: Replicase polyprotein 1ab
著者Chatterjee, A, Johnson, M.A, Serrano, P, Pedrini, B, Joseph, J, Saikatendu, K, Neuman, B, Stevens, R.C, Wilson, I.A, Buchmeier, M.J, Kuhn, P, Wuthrich, K, Joint Center for Structural Genomics (JCSG)
登録日2008-01-04
公開日2008-02-05
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Nuclear magnetic resonance structure shows that the severe acute respiratory syndrome coronavirus-unique domain contains a macrodomain fold.
J.Virol., 83, 2009
8T2T
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Structure of a group II intron ribonucleoprotein in the post-ligation (post-2F) state
分子名称: AMMONIUM ION, Group II intron reverse transcriptase/maturase, MAGNESIUM ION, ...
著者Xu, L, Liu, T, Chung, K, Pyle, A.M.
登録日2023-06-06
公開日2023-11-22
最終更新日2024-01-03
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献Structural insights into intron catalysis and dynamics during splicing.
Nature, 624, 2023
6O3W
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Crystal structure of yeast Nrd1 CID in complex with Sen1 NIM1
分子名称: Helicase SEN1, Protein NRD1
著者Zhang, Y, Tong, L.
登録日2019-02-27
公開日2019-06-05
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Identification of Three Sequence Motifs in the Transcription Termination Factor Sen1 that Mediate Direct Interactions with Nrd1.
Structure, 27, 2019
6WWA
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Crystal structure of human SHLD2-SHLD3-REV7 complex
分子名称: Mitotic spindle assembly checkpoint protein MAD2B, Shieldin complex subunit 2,Shieldin complex subunit 3 chimera
著者Xie, W, Patel, D.J.
登録日2020-05-08
公開日2021-03-03
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (3.8 Å)
主引用文献Molecular mechanisms of assembly and TRIP13-mediated remodeling of the human Shieldin complex.
Proc.Natl.Acad.Sci.USA, 118, 2021
6WW9
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Crystal structure of human REV7(R124A)-SHLD3(35-58) complex
分子名称: Mitotic spindle assembly checkpoint protein MAD2B, Shieldin complex subunit 3
著者Xie, W, Patel, D.J.
登録日2020-05-08
公開日2021-03-03
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Molecular mechanisms of assembly and TRIP13-mediated remodeling of the human Shieldin complex.
Proc.Natl.Acad.Sci.USA, 118, 2021
1YG3
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Solution Structure of the ScYLV P1-P2 Frameshifting Pseudoknot, 20 Lowest Energy Structures
分子名称: ScYLV RNA pseudoknot
著者Cornish, P.V, Hennig, M, Giedroc, D.P.
登録日2005-01-04
公開日2005-12-13
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献A loop 2 cytidine-stem 1 minor groove interaction as a positive determinant for pseudoknot-stimulated -1 ribosomal frameshifting
Proc.Natl.Acad.Sci.USA, 102, 2005
2WFS
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BU of 2wfs by Molmil
Fitting of influenza virus NP structure into the 9-fold symmetryzed cryoEM reconstruction of an active RNP particle.
分子名称: NUCLEOPROTEIN
著者Coloma, R, Valpuesta, J.M, Arranz, R, Carrascosa, J.L, Ortin, J, Martin-Benito, J.
登録日2009-04-15
公開日2009-07-07
最終更新日2024-05-08
実験手法ELECTRON MICROSCOPY (12 Å)
主引用文献The Structure of a Biologically Active Influenza Virus Ribonucleoprotein Complex.
Plos Pathog., 5, 2009
3ODR
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BU of 3odr by Molmil
Crystal Structure of the N-terminal Domain of Human Symplekin
分子名称: 1,2-ETHANEDIOL, Symplekin
著者Tong, L, Xiang, K.
登録日2010-08-11
公開日2010-10-06
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Crystal structure of the human symplekin-Ssu72-CTD phosphopeptide complex.
Nature, 467, 2010
2JZD
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NMR structure of the domain 527-651 of the SARS-CoV nonstructural protein nsp3
分子名称: Replicase polyprotein 1ab
著者Chatterjee, A, Johnson, M.A, Serrano, P, Pedrini, B, Joseph, J, Saikatendu, K, Neuman, B, Stevens, R.C, Wilson, I.A, Buchmeier, M.J, Kuhn, P, Wuthrich, K, Joint Center for Structural Genomics (JCSG)
登録日2008-01-04
公開日2008-02-05
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Nuclear magnetic resonance structure shows that the severe acute respiratory syndrome coronavirus-unique domain contains a macrodomain fold.
J.Virol., 83, 2009
5OP0
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Structure of Prim-PolC from Mycobacterium smegmatis
分子名称: DNA polymerase LigD, polymerase domain
著者Brissett, N.C, Doherty, A.J.
登録日2017-08-09
公開日2017-11-15
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.84 Å)
主引用文献DNA Ligase C and Prim-PolC participate in base excision repair in mycobacteria.
Nat Commun, 8, 2017
4QPL
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Crystal structure of RNF146(RING-WWE)/UbcH5a/iso-ADPr complex
分子名称: 2'-O-(5-O-phosphono-alpha-D-ribofuranosyl)adenosine 5'-(dihydrogen phosphate), E3 ubiquitin-protein ligase RNF146, Ubiquitin-conjugating enzyme E2 D1, ...
著者Wang, Z, DaRosa, P.A, Klevit, R.E, Xu, W.
登録日2014-06-23
公開日2014-10-15
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Allosteric activation of the RNF146 ubiquitin ligase by a poly(ADP-ribosyl)ation signal.
Nature, 517, 2015
4XW6
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X-ray structure of PKAc with ADP, free phosphate ion, CP20, magnesium ions
分子名称: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, PHOSPHATE ION, ...
著者Gerlits, O, Tian, J, Das, A, Taylor, S, Langan, P, Heller, T.W, Kovalevsky, A.
登録日2015-01-28
公開日2015-05-06
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Phosphoryl Transfer Reaction Snapshots in Crystals: INSIGHTS INTO THE MECHANISM OF PROTEIN KINASE A CATALYTIC SUBUNIT.
J.Biol.Chem., 290, 2015
4XW5
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X-ray structure of PKAc with ATP, CP20, calcium ions
分子名称: ADENOSINE-5'-TRIPHOSPHATE, CALCIUM ION, cAMP-dependent protein kinase catalytic subunit alpha, ...
著者Gerlits, O, Tian, J, Das, A, Taylor, S, Langan, P, Heller, T.W, Kovalevsky, A.
登録日2015-01-28
公開日2015-05-06
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Phosphoryl Transfer Reaction Snapshots in Crystals: INSIGHTS INTO THE MECHANISM OF PROTEIN KINASE A CATALYTIC SUBUNIT.
J.Biol.Chem., 290, 2015
6IKA
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HIV-1 reverse transcriptase with Q151M/G112S/D113A/Y115F/F116Y/F160L/I159L:DNA:entecavir-triphosphate ternary complex
分子名称: DNA/RNA (38-MER), GLYCEROL, HIV-1 RT p51 subunit, ...
著者Yasutake, Y, Hattori, S.I, Tamura, N, Maeda, K.
登録日2018-10-15
公開日2019-01-30
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.598 Å)
主引用文献Active-site deformation in the structure of HIV-1 RT with HBV-associated septuple amino acid substitutions rationalizes the differential susceptibility of HIV-1 and HBV against 4'-modified nucleoside RT inhibitors.
Biochem. Biophys. Res. Commun., 509, 2019
6IK9
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HIV-1 reverse transcriptase with Q151M/G112S/D113A/Y115F/F116Y/F160L/I159L:DNA:dGTP ternary complex
分子名称: 2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE, DNA/RNA (38-MER), GLYCEROL, ...
著者Yasutake, Y, Hattori, S.I, Tamura, N, Maeda, K.
登録日2018-10-15
公開日2019-01-30
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.435 Å)
主引用文献Active-site deformation in the structure of HIV-1 RT with HBV-associated septuple amino acid substitutions rationalizes the differential susceptibility of HIV-1 and HBV against 4'-modified nucleoside RT inhibitors.
Biochem. Biophys. Res. Commun., 509, 2019
1WBO
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fragment based p38 inhibitors
分子名称: 2-CHLOROPHENOL, MITOGEN-ACTIVATED PROTEIN KINASE 14
著者Cleasby, A, Devine, L, Gill, A, Jhoti, H.
登録日2004-11-04
公開日2005-01-27
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.16 Å)
主引用文献Fragment-Based Lead Discovery Using X-Ray Crystallography
J.Med.Chem., 48, 2005
4XW4
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X-ray structure of PKAc with AMPPNP, SP20, calcium ions
分子名称: CALCIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, cAMP-dependent protein kinase catalytic subunit alpha, ...
著者Gerlits, O, Tian, J, Das, A, Taylor, S, Langan, P, Heller, T.W, Kovalevsky, A.
登録日2015-01-28
公開日2015-05-06
最終更新日2015-07-01
実験手法X-RAY DIFFRACTION (1.82 Å)
主引用文献Phosphoryl Transfer Reaction Snapshots in Crystals: INSIGHTS INTO THE MECHANISM OF PROTEIN KINASE A CATALYTIC SUBUNIT.
J.Biol.Chem., 290, 2015
1W7H
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BU of 1w7h by Molmil
p38 Kinase crystal structure in complex with small molecule inhibitor
分子名称: 3-(BENZYLOXY)PYRIDIN-2-AMINE, MITOGEN-ACTIVATED PROTEIN KINASE 14
著者Jhoti, H, Gill, A, Cleasby, A, Devine, L.
登録日2004-09-02
公開日2005-02-08
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.214 Å)
主引用文献Fragment-Based Lead Discovery Using X-Ray Crystallography
J.Med.Chem., 48, 2005
8T2S
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Structure of a group II intron ribonucleoprotein in the pre-branching (pre-1F) state
分子名称: AMMONIUM ION, CALCIUM ION, Group II intron reverse transcriptase/maturase, ...
著者Xu, L, Liu, T, Chung, K, Pyle, A.M.
登録日2023-06-06
公開日2023-11-22
最終更新日2024-01-03
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献Structural insights into intron catalysis and dynamics during splicing.
Nature, 624, 2023
6R3V
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Crystal Structure of RhoA-GDP-Pi in Complex with RhoGAP
分子名称: 2,3-DIHYDROXY-1,4-DITHIOBUTANE, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, GUANOSINE-5'-DIPHOSPHATE, ...
著者Jin, Y.
登録日2019-03-21
公開日2019-05-08
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献A GAP-GTPase-GDP-PiIntermediate Crystal Structure Analyzed by DFT Shows GTP Hydrolysis Involves Serial Proton Transfers.
Chemistry, 25, 2019
6KDM
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HIV-1 reverse transcriptase with Q151M/Y115F/F116Y:DNA:entecavir 5'-triphosphate ternary complex
分子名称: DNA/RNA (38-MER), GLYCEROL, HIV-1 RT p51 subunit, ...
著者Yasutake, Y, Hattori, S.I, Tamura, N, Maeda, K.
登録日2019-07-02
公開日2020-03-04
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.32 Å)
主引用文献Structural features in common of HBV and HIV-1 resistance against chirally-distinct nucleoside analogues entecavir and lamivudine.
Sci Rep, 10, 2020
6KDN
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HIV-1 reverse transcriptase with Q151M/Y115F/F116Y:DNA:dGTP ternary complex
分子名称: 2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE, DNA/RNA (38-MER), GLYCEROL, ...
著者Yasutake, Y, Hattori, S.I, Tamura, N, Maeda, K.
登録日2019-07-02
公開日2020-03-04
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.303 Å)
主引用文献Structural features in common of HBV and HIV-1 resistance against chirally-distinct nucleoside analogues entecavir and lamivudine.
Sci Rep, 10, 2020
6KDJ
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HIV-1 reverse transcriptase with Q151M/Y115F/F116Y:DNA:lamivudine 5'-triphosphate ternary complex
分子名称: DNA/RNA (38-MER), GLYCEROL, HIV-1 RT p51 subunit, ...
著者Yasutake, Y, Hattori, S.I, Tamura, N, Maeda, K.
登録日2019-07-02
公開日2020-03-04
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.51 Å)
主引用文献Structural features in common of HBV and HIV-1 resistance against chirally-distinct nucleoside analogues entecavir and lamivudine.
Sci Rep, 10, 2020

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