Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

4L19
DownloadVisualize
BU of 4l19 by Molmil
Matrix metalloproteinase-13 complexed with selective inhibitor compound Q1
分子名称: 2-[(4-methylbenzyl)sulfanyl]-3,5,6,7-tetrahydro-4H-cyclopenta[d]pyrimidin-4-one, CALCIUM ION, Collagenase 3, ...
著者Minond, D, Spicer, T.P, Jiang, J, Taylor, A.B, Hart, P.J, Roush, W.R, Fields, G.B, Hodder, P.S.
登録日2013-06-02
公開日2014-12-10
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.66 Å)
主引用文献Characterization of selective exosite-binding inhibitors of matrix metalloproteinase 13 that prevent articular cartilage degradation in vitro.
J.Med.Chem., 57, 2014
7SVJ
DownloadVisualize
BU of 7svj by Molmil
Bile Salt Hydrolase from Lactobacillus ingluviei
分子名称: CALCIUM ION, Choloylglycine hydrolase, DI(HYDROXYETHYL)ETHER, ...
著者Walker, M.E, Patel, S, Redinbo, M.R.
登録日2021-11-19
公開日2023-01-25
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.43 Å)
主引用文献Bile salt hydrolases shape the bile acid landscape and restrict Clostridioides difficile growth in the murine gut.
Nat Microbiol, 8, 2023
7SUT
DownloadVisualize
BU of 7sut by Molmil
Light harvesting phycobiliprotein HaPE645 from the cryptophyte Hemiselmis andersenii CCMP644
分子名称: (15,16)-DIHYDROBILIVERDIN (SINGLY LINKED), 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CHLORIDE ION, ...
著者Rathbone, H.W, Michie, K.A, Laos, A.L, Curmi, P.M.G.
登録日2021-11-18
公開日2023-10-25
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.49 Å)
主引用文献Molecular dissection of the soluble photosynthetic antenna from the cryptophyte alga Hemiselmis andersenii.
Commun Biol, 6, 2023
7SNI
DownloadVisualize
BU of 7sni by Molmil
Structure of G6PD-D200N tetramer bound to NADP+ and G6P
分子名称: 6-O-phosphono-beta-D-glucopyranose, Glucose-6-phosphate 1-dehydrogenase, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
著者Wei, X, Marmorstein, R.
登録日2021-10-28
公開日2022-07-13
最終更新日2024-06-05
実験手法ELECTRON MICROSCOPY (2.5 Å)
主引用文献Allosteric role of a structural NADP + molecule in glucose-6-phosphate dehydrogenase activity.
Proc.Natl.Acad.Sci.USA, 119, 2022
4L2Z
DownloadVisualize
BU of 4l2z by Molmil
Crystal structure of S-Adenosylmethionine synthetase from Sulfolobus solfataricus complexed with SAE and PPi
分子名称: DIPHOSPHATE, MAGNESIUM ION, PHOSPHATE ION, ...
著者Wang, F, Hurley, K.A, Helmich, K.E, Singh, S, Bingman, C.A, Thorson, J.S, Phillips Jr, G.N, Enzyme Discovery for Natural Product Biosynthesis (NatPro)
登録日2013-06-05
公開日2013-06-19
最終更新日2023-12-06
実験手法X-RAY DIFFRACTION (2.494 Å)
主引用文献Understanding molecular recognition of promiscuity of thermophilic methionine adenosyltransferase sMAT from Sulfolobus solfataricus.
Febs J., 281, 2014
7SNH
DownloadVisualize
BU of 7snh by Molmil
Structure of G6PD-D200N tetramer bound to NADP+
分子名称: Glucose-6-phosphate 1-dehydrogenase, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
著者Wei, X, Marmorstein, R.
登録日2021-10-28
公開日2022-07-13
最終更新日2024-06-05
実験手法ELECTRON MICROSCOPY (2.2 Å)
主引用文献Allosteric role of a structural NADP + molecule in glucose-6-phosphate dehydrogenase activity.
Proc.Natl.Acad.Sci.USA, 119, 2022
5WKI
DownloadVisualize
BU of 5wki by Molmil
Crystal structure of PG90 TCR-CD1b-PG complex
分子名称: (19S,22R,25R)-22,25,26-trihydroxy-16,22-dioxo-17,21,23-trioxa-22lambda~5~-phosphahexacosan-19-yl (9E)-octadec-9-enoate, 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Shahine, A, Gras, S, Rossjohn, J.
登録日2017-07-25
公開日2017-11-01
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (2.75 Å)
主引用文献A molecular basis of human T cell receptor autoreactivity toward self-phospholipids.
Sci Immunol, 2, 2017
4OSO
DownloadVisualize
BU of 4oso by Molmil
The crystal structure of landomycin C-6 ketoreductase LanV with bound NADP and rabelomycin
分子名称: DI(HYDROXYETHYL)ETHER, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, Reductase homolog, ...
著者Paananen, P, Niiranen, L, Patrikainen, P, Metsa-Ketela, M.
登録日2014-02-13
公開日2014-10-01
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structure-based engineering of angucyclinone 6-ketoreductases.
Chem.Biol., 21, 2014
3OZK
DownloadVisualize
BU of 3ozk by Molmil
Crystal structure of human transthyretin variant A25T in complex with thyroxine (T4)
分子名称: 3,5,3',5'-TETRAIODO-L-THYRONINE, Transthyretin
著者Lima, L.M.T.R, Palmieri, L.C, Foguel, D, Palhano, F.L.
登録日2010-09-25
公開日2011-08-24
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal structure of human transthyretin variant A25T in complex with thyroxine (T4)
To be Published
7TOE
DownloadVisualize
BU of 7toe by Molmil
Structure of G6PD-WT tetramer with no symmetry imposed
分子名称: Glucose-6-phosphate 1-dehydrogenase
著者Wei, X, Marmorstein, R.
登録日2022-01-24
公開日2022-09-14
最終更新日2024-06-05
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献Allosteric role of a structural NADP + molecule in glucose-6-phosphate dehydrogenase activity.
Proc.Natl.Acad.Sci.USA, 119, 2022
3DEI
DownloadVisualize
BU of 3dei by Molmil
Crystal Structures of Caspase-3 with Bound Isoquinoline-1,3,4-trione Derivative Inhibitors
分子名称: (1S)-2-oxo-1-phenyl-2-[(1,3,4-trioxo-1,2,3,4-tetrahydroisoquinolin-5-yl)amino]ethyl acetate, Caspase-3
著者Wu, J, Du, J, Li, J, Ding, J.
登録日2008-06-10
公開日2008-09-02
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Isoquinoline-1,3,4-trione Derivatives Inactivate Caspase-3 by Generation of Reactive Oxygen Species
J.Biol.Chem., 283, 2008
1Y2X
DownloadVisualize
BU of 1y2x by Molmil
Crystal structure of the tetragonal form of the common edible mushroom (Agaricus bisporus) lectin in complex with T-antigen and N-acetylglucosamine
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, SERINE, beta-D-galactopyranose-(1-3)-2-acetamido-2-deoxy-beta-D-galactopyranose, ...
著者Carrizo, M.E, Capaldi, S, Perduca, M, Irazoqui, F.J, Nores, G.A, Monaco, H.L.
登録日2004-11-23
公開日2004-12-21
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.36 Å)
主引用文献The Antineoplastic Lectin of the Common Edible Mushroom (Agaricus bisporus) Has Two Binding Sites, Each Specific for a Different Configuration at a Single Epimeric Hydroxyl
J.Biol.Chem., 280, 2005
4K6I
DownloadVisualize
BU of 4k6i by Molmil
Crystal structure of human retinoid X receptor alpha-ligand binding domain complex with Targretin and the coactivator peptide GRIP-1
分子名称: 4-[1-(3,5,5,8,8-pentamethyl-5,6,7,8-tetrahydronaphthalen-2-yl)ethenyl]benzoic acid, Nuclear receptor coactivator 2, Retinoic acid receptor RXR-alpha
著者Xia, G, Smith, C.D, Muccio, D.D.
登録日2013-04-15
公開日2013-11-13
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Defining the Communication between Agonist and Coactivator Binding in the Retinoid X Receptor alpha Ligand Binding Domain.
J.Biol.Chem., 289, 2014
3OO5
DownloadVisualize
BU of 3oo5 by Molmil
R-state human hemoglobin: nitriheme modified
分子名称: Hemoglobin subunit alpha, Hemoglobin subunit beta, NITRITE ION, ...
著者Yi, J, Thormas, L.M, Richter-Addo, G.B.
登録日2010-08-30
公開日2011-09-07
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Crystallographic Trapping of Heme Loss Intermediates during the Nitrite-Induced Degradation of Human Hemoglobin.
Biochemistry, 50, 2011
3P4T
DownloadVisualize
BU of 3p4t by Molmil
Crystal structure of a putative acyl-CoA dehydrogenase from Mycobacterium smegmatis
分子名称: 1,2-ETHANEDIOL, Putative acyl-CoA dehydrogenase, [(2R,3S,4R,5R)-5-(6-amino-9H-purin-9-yl)-3,4-dihydroxytetrahydrofuran-2-yl]methyl (2R,3S,4S)-5-[(4aS,10aR)-7,8-dimethyl-2,4-dioxo-1,3,4,4a,5,10a-hexahydrobenzo[g]pteridin-10(2H)-yl]-2,3,4-trihydroxypentyl dihydrogen diphosphate
著者Seattle Structural Genomics Center for Infectious Disease (SSGCID)
登録日2010-10-07
公開日2010-10-20
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Increasing the structural coverage of tuberculosis drug targets.
Tuberculosis (Edinb), 95, 2015
4KQ2
DownloadVisualize
BU of 4kq2 by Molmil
Glucose1,2cyclic phosphate bound activated state of Yeast Glycogen Synthase
分子名称: (2R,3aR,5R,6S,7S,7aR)-5-(hydroxymethyl)tetrahydro-3aH-[1,3,2]dioxaphospholo[4,5-b]pyran-2,6,7-triol 2-oxide, 6-O-phosphono-alpha-D-glucopyranose, BARIUM ION, ...
著者Chikwana, V.M, Hurley, T.D.
登録日2013-05-14
公開日2013-12-11
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.95 Å)
主引用文献Structural basis for 2'-phosphate incorporation into glycogen by glycogen synthase.
Proc.Natl.Acad.Sci.USA, 110, 2013
4NVP
DownloadVisualize
BU of 4nvp by Molmil
Structure of the cyclic nucleotide-binding domain of HCN4 channel complexed with 7-CH-cAMP
分子名称: (2S,4aR,6R,7R,7aS)-6-(4-amino-7H-pyrrolo[2,3-d]pyrimidin-7-yl)tetrahydro-4H-furo[3,2-d][1,3,2]dioxaphosphinine-2,7-diol 2-oxide, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 4
著者Alfieri, A, Moroni, A.
登録日2013-12-05
公開日2014-03-19
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Cyclic Nucleotide Mapping of Hyperpolarization-Activated Cyclic Nucleotide-Gated (HCN) Channels.
Acs Chem.Biol., 9, 2014
3DEK
DownloadVisualize
BU of 3dek by Molmil
Crystal Structures of Caspase-3 with Bound Isoquinoline-1,3,4-trione Derivative Inhibitors
分子名称: Caspase-3, N-[3-(2-fluoroethoxy)phenyl]-N'-(1,3,4-trioxo-1,2,3,4-tetrahydroisoquinolin-6-yl)butanediamide
著者Wu, J, Du, J, Li, J, Ding, J.
登録日2008-06-10
公開日2008-09-02
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Isoquinoline-1,3,4-trione Derivatives Inactivate Caspase-3 by Generation of Reactive Oxygen Species
J.Biol.Chem., 283, 2008
3OO4
DownloadVisualize
BU of 3oo4 by Molmil
R-state human hemoglobin: nitriheme modified at alpha
分子名称: Hemoglobin subunit alpha, Hemoglobin subunit beta, NITRITE ION, ...
著者Yi, J, Thormas, L.M, Richter-Addo, G.B.
登録日2010-08-30
公開日2011-09-07
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystallographic Trapping of Heme Loss Intermediates during the Nitrite-Induced Degradation of Human Hemoglobin.
Biochemistry, 50, 2011
4NY4
DownloadVisualize
BU of 4ny4 by Molmil
Crystal structure of CYP3A4 in complex with an inhibitor
分子名称: (8R)-3,3-difluoro-8-[4-fluoro-3-(pyridin-3-yl)phenyl]-8-(4-methoxy-3-methylphenyl)-2,3,4,8-tetrahydroimidazo[1,5-a]pyrimidin-6-amine, Cytochrome P450 3A4, PROTOPORPHYRIN IX CONTAINING FE
著者Branden, G, Sjogren, T, Xue, Y.
登録日2013-12-10
公開日2014-08-13
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.95 Å)
主引用文献Structure-based ligand design to overcome CYP inhibition in drug discovery projects.
Drug Discov Today, 19, 2014
3GLQ
DownloadVisualize
BU of 3glq by Molmil
Crystal structure of S-adenosyl-L-homocysteine hydrolase from Burkholderia pseudomallei in complex with 9-beta-D-arabino-furansyl-adenine
分子名称: 2-(6-AMINO-PURIN-9-YL)-5-HYDROXYMETHYL-TETRAHYDRO-FURAN-3,4-DIOL, Adenosylhomocysteinase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
著者Seattle Structural Genomics Center for Infectious Disease (SSGCID)
登録日2009-03-12
公開日2009-03-24
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal structure of S-adenosyl-L-homocysteine hydrolase from Burkholderia pseudomallei in complex with 9-beta-D-arabino-furansyl-adenine
To be Published
5K8X
DownloadVisualize
BU of 5k8x by Molmil
Crystal structure of mouse CARM1 in complex with inhibitor U3
分子名称: 1,2-DIMETHOXYETHANE, 1,2-ETHANEDIOL, 1-METHOXY-2-(2-METHOXYETHOXY)ETHANE, ...
著者Cura, V, Marechal, N, Mailliot, J, Troffer-Charlier, N, Hassenboehler, P, Wurtz, J.M, Bonnefond, L, Cavarelli, J.
登録日2016-05-31
公開日2017-06-21
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.991 Å)
主引用文献Crystal structure of mouse CARM1 in complex with inhibitor U3
To Be Published
4O06
DownloadVisualize
BU of 4o06 by Molmil
1.15A Resolution Structure of the Proteasome Assembly Chaperone Nas2 PDZ Domain
分子名称: Probable 26S proteasome regulatory subunit p27, SULFATE ION, TETRAETHYLENE GLYCOL
著者Lovell, S, Mehzabeen, N, Battaile, K.P, Singh, C.R, Chowdhury, W.Q, Geanes, E, Roelofs, J.
登録日2013-12-13
公開日2014-04-16
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.15 Å)
主引用文献1.15 angstrom resolution structure of the proteasome-assembly chaperone Nas2 PDZ domain.
Acta Crystallogr F Struct Biol Commun, 70, 2014
4O3B
DownloadVisualize
BU of 4o3b by Molmil
Crystal structure of an open/closed glua2 ligand-binding domain dimer at 1.91 A resolution
分子名称: ACETATE ION, CHLORIDE ION, DI(HYDROXYETHYL)ETHER, ...
著者Krintel, C, de Rabassa, A.C, Frydenvang, K, Gajhede, M, Kastrup, J.S.
登録日2013-12-18
公開日2014-04-16
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.906 Å)
主引用文献L-Asp is a useful tool in the purification of the ionotropic glutamate receptor A2 ligand-binding domain.
Febs J., 281, 2014
8B4E
DownloadVisualize
BU of 8b4e by Molmil
ToxR bacterial transcriptional regulator bound to 25 bp toxT promoter DNA
分子名称: Cholera toxin transcriptional activator, DNA (25-MER)
著者Canals, A, Pieretti, S, Muriel, M, El Yaman, N, Fabrega-Ferrer, M, Perez-Luque, R, Krukonis, E.S, Coll, M.
登録日2022-09-20
公開日2023-08-09
最終更新日2024-06-19
実験手法X-RAY DIFFRACTION (3.25 Å)
主引用文献ToxR activates the Vibrio cholerae virulence genes by tethering DNA to the membrane through versatile binding to multiple sites.
Proc.Natl.Acad.Sci.USA, 120, 2023

222415

件を2024-07-10に公開中

PDB statisticsPDBj update infoContact PDBjnumon