PDB: 14265 件ウェブページステータス検索Chemie searchBIRD

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7OW7	EIF6-bound large subunit of the human ribosome 分子名称: 28S rRNA, 5.8S ribosomal RNA, 5S rRNA, ... 著者 Faille, A, Warren, A.J. 登録日 2021-06-16 公開日 2022-10-05 最終更新日 2024-07-17 実験手法 ELECTRON MICROSCOPY (2.4 Å) 主引用文献 Structure of human EIF6-bound large ribosomal subunit To Be Published
6KL7	Beta-arrestin 1 mutant S13D/T275D 分子名称: 1,2-ETHANEDIOL, BARIUM ION, Beta-arrestin-1 著者 Kang, H, Choi, H.J. 登録日 2019-07-29 公開日 2020-01-29 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (2.794 Å) 主引用文献 Conformational Dynamics and Functional Implications of Phosphorylated beta-Arrestins. Structure, 28, 2020
7WTW	Cryo-EM structure of a human pre-40S ribosomal subunit - State RRP12-A3 分子名称: 18S rRNA, 40S ribosomal protein S11, 40S ribosomal protein S12, ... 著者 Cheng, J, Lau, B, Thoms, M, Ameismeier, M, Berninghausen, O, Hurt, E, Beckmann, R. 登録日 2022-02-05 公開日 2022-10-19 最終更新日 2024-06-26 実験手法 ELECTRON MICROSCOPY (3.2 Å) 主引用文献 The nucleoplasmic phase of pre-40S formation prior to nuclear export. Nucleic Acids Res., 50, 2022
7WTT	Cryo-EM structure of a human pre-40S ribosomal subunit - State RRP12-A1 (with CK1) 分子名称: 18S rRNA, 40S ribosomal protein S11, 40S ribosomal protein S12, ... 著者 Cheng, J, Lau, B, Thoms, M, Ameismeier, M, Berninghausen, O, Hurt, E, Beckmann, R. 登録日 2022-02-05 公開日 2022-10-19 最終更新日 2024-06-26 実験手法 ELECTRON MICROSCOPY (3.1 Å) 主引用文献 The nucleoplasmic phase of pre-40S formation prior to nuclear export. Nucleic Acids Res., 50, 2022
6KDK	HIV-1 reverse transcriptase with Q151M/Y115F/F116Y:DNA:dCTP ternary complex 分子名称: 2'-DEOXYCYTIDINE-5'-TRIPHOSPHATE, DNA/RNA (38-MER), GLYCEROL, ... 著者 Yasutake, Y, Hattori, S.I, Tamura, N, Maeda, K. 登録日 2019-07-02 公開日 2020-03-04 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (2.56 Å) 主引用文献 Structural features in common of HBV and HIV-1 resistance against chirally-distinct nucleoside analogues entecavir and lamivudine. Sci Rep, 10, 2020
7WTU	Cryo-EM structure of a human pre-40S ribosomal subunit - State RRP12-A1 (without CK1) 分子名称: 18S rRNA, 40S ribosomal protein S11, 40S ribosomal protein S12, ... 著者 Cheng, J, Lau, B, Thoms, M, Ameismeier, M, Berninghausen, O, Hurt, E, Beckmann, R. 登録日 2022-02-05 公開日 2022-10-19 最終更新日 2024-06-26 実験手法 ELECTRON MICROSCOPY (3 Å) 主引用文献 The nucleoplasmic phase of pre-40S formation prior to nuclear export. Nucleic Acids Res., 50, 2022
1KXA	SINDBIS VIRUS CAPSID, (WILD-TYPE) RESIDUES 106-264, TETRAGONAL CRYSTAL FORM 分子名称: SINDBIS VIRUS CAPSID PROTEIN 著者 Choi, H.-K, Rossmann, M.G. 登録日 1996-05-05 公開日 1996-11-08 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (3.1 Å) 主引用文献 Structural analysis of Sindbis virus capsid mutants involving assembly and catalysis. J.Mol.Biol., 262, 1996
7WTV	Cryo-EM structure of a human pre-40S ribosomal subunit - State RRP12-A2 分子名称: 18S rRNA, 40S ribosomal protein S11, 40S ribosomal protein S12, ... 著者 Cheng, J, Lau, B, Thoms, M, Ameismeier, M, Berninghausen, O, Hurt, E, Beckmann, R. 登録日 2022-02-05 公開日 2022-10-19 最終更新日 2024-06-26 実験手法 ELECTRON MICROSCOPY (3.5 Å) 主引用文献 The nucleoplasmic phase of pre-40S formation prior to nuclear export. Nucleic Acids Res., 50, 2022
9EQJ	Crystal structure of pVHL:EloB:EloC in complex with MP-1-39 分子名称: (2S,4R)-1-[(2R)-2-[(1-fluoranylcyclopropyl)carbonylamino]-3-methyl-3-[[cis-4-(morpholin-4-ylmethyl)cyclohexyl]methylsulfanyl]butanoyl]-N-[[4-(4-methyl-1,3-thiazol-5-yl)phenyl]methyl]-4-oxidanyl-pyrrolidine-2-carboxamide, Elongin-B, Elongin-C, ... 著者 Kroupova, A, Pierri, M, Liu, X, Ciulli, A. 登録日 2024-03-21 公開日 2024-08-28 実験手法 X-RAY DIFFRACTION (2.05 Å) 主引用文献 Stereochemical inversion at a 1,4-cyclohexyl PROTAC linker fine-tunes conformation and binding affinity. Bioorg.Med.Chem.Lett., 110, 2024
9EQM	Crystal structure of pVHL:EloB:EloC in complex with MP-1-21 分子名称: (2S,4R)-1-[(2R)-2-[(1-fluoranylcyclopropyl)carbonylamino]-3-methyl-3-[[trans-4-(morpholin-4-ylmethyl)cyclohexyl]methylsulfanyl]butanoyl]-N-[[4-(4-methyl-1,3-thiazol-5-yl)phenyl]methyl]-4-oxidanyl-pyrrolidine-2-carboxamide, Elongin-B, Elongin-C, ... 著者 Kroupova, A, Pierri, M, Liu, X, Ciulli, A. 登録日 2024-03-21 公開日 2024-08-28 実験手法 X-RAY DIFFRACTION (2.19 Å) 主引用文献 Stereochemical inversion at a 1,4-cyclohexyl PROTAC linker fine-tunes conformation and binding affinity. Bioorg.Med.Chem.Lett., 110, 2024
6ZDU	Structure of telomerase from Candida albicans in complexe with TWJ fragment of telomeric RNA 分子名称: Chains: C,D, Telomerase reverse transcriptase 著者 Zhai, L, Rety, S, Chen, W.F, Auguin, D, Xi, X.G. 登録日 2020-06-15 公開日 2021-04-28 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (3.45 Å) 主引用文献 Crystal structures of N-terminally truncated telomerase reverse transcriptase from fungi‡. Nucleic Acids Res., 49, 2021
6ZDP	Structure of telomerase from Candida Tropicalis in complexe with TWJ fragment of telomeric RNA 分子名称: Chains: B, POTASSIUM ION, Telomerase reverse transcriptase 著者 Zhai, L, Rety, S, Chen, W.F, Auguin, D, Xi, X.G. 登録日 2020-06-15 公開日 2021-04-28 最終更新日 2024-11-06 実験手法 X-RAY DIFFRACTION (2.85 Å) 主引用文献 Crystal structures of N-terminally truncated telomerase reverse transcriptase from fungi‡. Nucleic Acids Res., 49, 2021
8IFD	Dibekacin-added human 80S ribosome 分子名称: 18S ribosomal RNA, 28S ribosomal RNA, 40S ribosomal protein S10, ... 著者 Tomono, J, Asano, K, Chiashi, T, Tanaka, Y, Yokoyama, T. 登録日 2023-02-17 公開日 2024-02-14 最終更新日 2024-06-19 実験手法 ELECTRON MICROSCOPY (2.59 Å) 主引用文献 Direct visualization of ribosomes in the cell-free system revealed the functional evolution of aminoglycoside. J.Biochem., 175, 2024
8IFE	Arbekacin-added human 80S ribosome 分子名称: 18S ribosomal RNA, 28S ribosomal RNA, 40S ribosomal protein S10, ... 著者 Tomono, J, Asano, K, Chiashi, T, Tanaka, Y, Yokoyama, T. 登録日 2023-02-17 公開日 2024-02-14 最終更新日 2024-06-19 実験手法 ELECTRON MICROSCOPY (2.57 Å) 主引用文献 Direct visualization of ribosomes in the cell-free system revealed the functional evolution of aminoglycoside. J.Biochem., 175, 2024
5XQM	NMR solution structure of SMO1, Sumo homologue in Caenorhabditis elegans 分子名称: Small ubiquitin-related modifier 著者 Gowda, C.M, Surana, P, Das, R. 登録日 2017-06-07 公開日 2017-11-08 最終更新日 2024-05-01 実験手法 SOLUTION NMR 主引用文献 Structural and functional analysis of SMO-1, the SUMO homolog in Caenorhabditis elegans PLoS ONE, 12, 2017
8R1G	Dimeric ternary structure of E6AP-E6-p53 分子名称: Cellular tumor antigen p53, Ubiquitin-like protein SMT3,Protein E6, Ubiquitin-protein ligase E3A, ... 著者 Sandate, C.R, Chakrabory, D, Kater, L, Kempf, G, Thoma, N.H. 登録日 2023-11-01 公開日 2023-12-06 最終更新日 2024-06-19 実験手法 ELECTRON MICROSCOPY (3.99 Å) 主引用文献 Structural insights into viral hijacking of p53 by E6 and E6AP Biorxiv, 2023
8R1F	Monomeric E6AP-E6-p53 ternary complex 分子名称: Cellular tumor antigen p53, Ubiquitin-like protein SMT3,Protein E6, Ubiquitin-protein ligase E3A, ... 著者 Sandate, C.R, Chakraborty, D, Kater, L, Kempf, G, Thoma, N.H. 登録日 2023-11-01 公開日 2023-12-06 最終更新日 2024-06-19 実験手法 ELECTRON MICROSCOPY (3.67 Å) 主引用文献 Structural insights into viral hijacking of p53 by E6 and E6AP Biorxiv, 2023
4DQY	Structure of Human PARP-1 bound to a DNA double strand break 分子名称: 1,2-ETHANEDIOL, DNA (26-MER), Poly [ADP-ribose] polymerase 1, ... 著者 Langelier, M.F, Pascal, J.M. 登録日 2012-02-16 公開日 2012-05-30 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (3.25 Å) 主引用文献 Structural basis for DNA damage-dependent poly(ADP-ribosyl)ation by human PARP-1. Science, 336, 2012
7ONB	Structure of the U2 5' module of the A3'-SSA complex 分子名称: MINX, PHD finger-like domain-containing protein 5A, RNU2, ... 著者 Cretu, C, Pena, V. 登録日 2021-05-25 公開日 2021-08-04 実験手法 ELECTRON MICROSCOPY (3.1 Å) 主引用文献 Structural basis of intron selection by U2 snRNP in the presence of covalent inhibitors. Nat Commun, 12, 2021
7CPV	Cryo-EM structure of 80S ribosome from mouse testis 分子名称: 40S ribosomal protein S10, 40S ribosomal protein S11, 40S ribosomal protein S13, ... 著者 Huo, Y.G, He, X, Jiang, T, Qin, Y, Guo, X.J, Sha, J.H. 登録日 2020-08-08 公開日 2022-02-02 最終更新日 2024-05-29 実験手法 ELECTRON MICROSCOPY (3.03 Å) 主引用文献 A male germ-cell-specific ribosome controls male fertility. Nature, 612, 2022
8YFE	Cryo EM structure of Komagataella phaffii Rat1-Rai1 complex 分子名称: 5'-3' exoribonuclease, Decapping nuclease 著者 Yanagisawa, T, Murayama, Y, Ehara, H, Sekine, S.I. 登録日 2024-02-24 公開日 2024-09-25 実験手法 ELECTRON MICROSCOPY (3.47 Å) 主引用文献 Structural basis of eukaryotic transcription termination by the Rat1 exonuclease complex. Nat Commun, 15, 2024
7CPU	Cryo-EM structure of 80S ribosome from mouse kidney 分子名称: 40S ribosomal protein S10, 40S ribosomal protein S11, 40S ribosomal protein S13, ... 著者 Huo, Y.G, He, X, Jiang, T, Qin, Y, Guo, X.J, Sha, J.H. 登録日 2020-08-08 公開日 2022-02-02 最終更新日 2024-05-29 実験手法 ELECTRON MICROSCOPY (2.82 Å) 主引用文献 A male germ-cell-specific ribosome controls male fertility. Nature, 612, 2022
6SWA	Mus musculus brain neocortex ribosome 60S bound to Ebp1 分子名称: 28S ribosomal RNA, 5.8S ribosomal RNA, 5S ribosomal RNA, ... 著者 Kraushar, M.L, Sprink, T. 登録日 2019-09-20 公開日 2020-09-30 最終更新日 2021-02-17 実験手法 ELECTRON MICROSCOPY (3.1 Å) 主引用文献 Protein Synthesis in the Developing Neocortex at Near-Atomic Resolution Reveals Ebp1-Mediated Neuronal Proteostasis at the 60S Tunnel Exit. Mol.Cell, 81, 2021
8XXM	Cryo-EM structure of the human 40S ribosome with PDCD4 and eIF3G 分子名称: 18S rRNA, 40S ribosomal protein S10, 40S ribosomal protein S11, ... 著者 Ye, X, Huang, Z, Li, Y, Wang, M, Cheng, J. 登録日 2024-01-18 公開日 2024-05-01 最終更新日 2024-07-10 実験手法 ELECTRON MICROSCOPY (3.2 Å) 主引用文献 Human tumor suppressor PDCD4 directly interacts with ribosomes to repress translation. Cell Res., 34, 2024
8XXN	Cryo-EM structure of the human 43S ribosome with PDCD4 分子名称: 18S rRNA, 40S ribosomal protein S10, 40S ribosomal protein S11, ... 著者 Ye, X, Huang, Z, Li, Y, Wang, M, Cheng, J. 登録日 2024-01-18 公開日 2024-05-01 最終更新日 2024-07-10 実験手法 ELECTRON MICROSCOPY (3.6 Å) 主引用文献 Human tumor suppressor PDCD4 directly interacts with ribosomes to repress translation. Cell Res., 34, 2024

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