PDB: 13252 件ウェブページステータス検索Chemie searchBIRD

---

2PI5	T7 RNA polymerase complexed with a phi10 promoter 分子名称: 5'-D(*CP*TP*TP*C*CP*TP*AP*TP*AP*GP*TP*GP*AP*GP*TP*CP*GP*TP*AP*TP*TP*A)-3', 5'-D(*TP*AP*AP*TP*AP*CP*GP*AP*CP*TP*CP*AP*CP*T)-3', DNA-directed RNA polymerase 著者 Kennedy, W.P, Momand, J.R, Yin, Y.W. 登録日 2007-04-12 公開日 2007-06-19 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (2.9 Å) 主引用文献 Mechanism for de novo RNA synthesis and initiating nucleotide specificity by t7 RNA polymerase. J.Mol.Biol., 370, 2007
2CKZ	X-ray structure of RNA polymerase III subcomplex C17-C25. 分子名称: DNA-DIRECTED RNA POLYMERASE III 18 KD POLYPEPTIDE, DNA-DIRECTED RNA POLYMERASE III 25 KD POLYPEPTIDE 著者 Jasiak, A.J, Armache, K.-J, Martens, B, Jansen, R.-P, Cramer, P. 登録日 2006-04-24 公開日 2006-07-13 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (3.2 Å) 主引用文献 Structural Biology of RNA Polymerase III: Subcomplex C17/-C25 X-Ray Structure and 11-Subunit Enzyme Model Mol.Cell, 23, 2006
4GWQ	Structure of the Mediator Head Module from S. cerevisiae in complex with the carboxy-terminal domain (CTD) of RNA Polymerase II Rpb1 subunit 分子名称: DNA-directed RNA polymerase II subunit RPB1, Mediator of RNA polymerase II transcription subunit 11, Mediator of RNA polymerase II transcription subunit 17, ... 著者 Robinson, P.J.J, Bushnell, D.A, Trnka, M.J, Burlingame, A.L, Kornberg, R.D. 登録日 2012-09-03 公開日 2012-10-31 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (4.5 Å) 主引用文献 Structure of the Mediator Head module bound to the carboxy-terminal domain of RNA polymerase II. Proc.Natl.Acad.Sci.USA, 109, 2012
2O5J	Crystal structure of the T. thermophilus RNAP polymerase elongation complex with the NTP substrate analog 分子名称: 5'-D(*AP*AP*CP*GP*CP*CP*AP*GP*AP*CP*AP*GP*GP*G)-3', 5'-D(P*CP*CP*CP*TP*GP*TP*CP*TP*GP*GP*CP*GP*TP*TP*CP*GP*CP*GP*CP*GP*CP*CP*G)-3', 5'-R(P*GP*AP*GP*UP*CP*UP*GP*CP*GP*GP*CP*GP*CP*GP*CP*G)-3', ... 著者 Vassylyev, D.G, Vassylyeva, M.N. 登録日 2006-12-06 公開日 2007-07-03 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (3 Å) 主引用文献 Structural basis for substrate loading in bacterial RNA polymerase. Nature, 448, 2007
4NC7	N-terminal domain of delta-subunit of RNA polymerase complexed with I3C and nickel ions 分子名称: 5-amino-2,4,6-triiodobenzene-1,3-dicarboxylic acid, DNA-directed RNA polymerase subunit delta, NICKEL (II) ION 著者 Demo, G, Papouskova, V, Komarek, J, Sanderova, H, Rabatinova, A, Krasny, L, Zidek, L, Sklenar, V, Wimmerova, M. 登録日 2013-10-24 公開日 2014-07-02 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 X-ray vs. NMR structure of N-terminal domain of delta-subunit of RNA polymerase. J.Struct.Biol., 187, 2014
4NC8	N-terminal domain of delta-subunit of RNA polymerase complexed with nickel ions 分子名称: DNA-directed RNA polymerase subunit delta, NICKEL (II) ION 著者 Demo, G, Papouskova, V, Komarek, J, Sanderova, H, Rabatinova, A, Krasny, L, Zidek, L, Sklenar, V, Wimmerova, M. 登録日 2013-10-24 公開日 2014-07-02 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (2.17 Å) 主引用文献 X-ray vs. NMR structure of N-terminal domain of delta-subunit of RNA polymerase. J.Struct.Biol., 187, 2014
1QLN	STRUCTURE OF A TRANSCRIBING T7 RNA POLYMERASE INITIATION COMPLEX 分子名称: BACTERIOPHAGE T7 RNA POLYMERASE, DNA (5- D (P*CP*TP*CP*CP*CP*TP*AP*TP*AP*GP*TP*GP*AP*GP*TP*CP*GP*TP* AP*TP*TP*A)-3), DNA (5-D(P*TP*AP*AP*TP*AP*CP*GP*AP*CP*TP*CP*AP*CP*TP*A)-3), ... 著者 Cheetham, G.M.T, Steitz, T.A. 登録日 1999-09-01 公開日 2000-02-04 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 Structure of a Transcribing T7 RNA Polymerase Initiation Complex Science, 286, 1999
2O5I	Crystal structure of the T. thermophilus RNA polymerase elongation complex 分子名称: 5'-D(*AP*AP*CP*GP*CP*CP*AP*GP*AP*CP*AP*GP*GP*G)-3', 5'-D(P*CP*CP*CP*TP*GP*TP*CP*TP*GP*GP*CP*GP*TP*TP*CP*GP*CP*GP*CP*GP*CP*CP*G)-3', 5'-R(P*GP*AP*GP*UP*CP*UP*GP*CP*GP*GP*CP*GP*CP*GP*CP*G)-3', ... 著者 Vassylyev, D.G, Tahirov, T.H, Vassylyeva, M.N. 登録日 2006-12-06 公開日 2007-07-03 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Structural basis for transcription elongation by bacterial RNA polymerase. Nature, 448, 2007
2PA8	X-Ray Crystal Structure of the D/L Subcomplex of the Sulfolobus Solfataricus RNA polymerase 分子名称: DNA-directed RNA polymerase subunit D, DNA-directed RNA polymerase subunit L, FE3-S4 CLUSTER, ... 著者 Hirata, A, Murakami, K.S. 登録日 2007-03-27 公開日 2008-02-05 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (1.76 Å) 主引用文献 The X-ray crystal structure of RNA polymerase from Archaea. Nature, 451, 2008
2HAI	Crystal structure of HCV NS5B RNA polymerase in complex with novel class of dihydropyrone-containing inhibitor. 分子名称: (6S)-6-CYCLOPENTYL-6-[2-(3-FLUORO-4-ISOPROPOXYPHENYL)ETHYL]-4-HYDROXY-5,6-DIHYDRO-2H-PYRAN-2-ONE, HEPATITIS C VIRUS NS5B RNA POLYMERASE 著者 Li, H, Love, R.L. 登録日 2006-06-12 公開日 2006-09-05 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (1.58 Å) 主引用文献 Identification and structure-based optimization of novel dihydropyrones as potent HCV RNA polymerase inhibitors. Bioorg.Med.Chem.Lett., 16, 2006
4B02	The C-terminal Priming Domain is Strongly Associated with the Main Body of Bacteriophage phi6 RNA-Dependent RNA Polymerase 分子名称: MANGANESE (II) ION, RNA-DIRECTED RNA POLYMERASE 著者 Sarin, L.P, Wright, S, Chen, Q, Degerth, L.H, Stuart, D.I, Grimes, J.M, Bamford, D.H, Poranen, M.M. 登録日 2012-06-27 公開日 2012-08-01 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (3.3 Å) 主引用文献 The C-Terminal Priming Domain is Strongly Associated with the Main Body of Bacteriophage Phi6 RNA-Dependent RNA Polymerase. Virology, 432, 2012
3WOE	Crystal structure of P23-45 gp39 (6-109) bound to Thermus thermophilus RNA polymerase beta-flap domain 分子名称: DNA-directed RNA polymerase subunit beta, Putative uncharacterized protein 著者 Tagami, S, Sekine, S, Minakhin, L, Esyunina, D, Akasaka, R, Shirouzu, M, Kulbachinskiy, A, Severinov, K, Yokoyama, S. 登録日 2013-12-26 公開日 2014-03-12 最終更新日 2015-03-25 実験手法 X-RAY DIFFRACTION (2.351 Å) 主引用文献 Structural basis for promoter specificity switching of RNA polymerase by a phage factor. Genes Dev., 28, 2014
3WOF	Crystal structure of P23-45 gp39 (6-132) bound to Thermus thermophilus RNA polymerase beta-flap domain 分子名称: DNA-directed RNA polymerase subunit beta, Putative uncharacterized protein 著者 Tagami, S, Sekine, S, Minakhin, L, Esyunina, D, Akasaka, R, Shirouzu, M, Kulbachinskiy, A, Severinov, K, Yokoyama, S. 登録日 2013-12-26 公開日 2014-03-12 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (3.298 Å) 主引用文献 Structural basis for promoter specificity switching of RNA polymerase by a phage factor. Genes Dev., 28, 2014
1OS5	Crystal structure of HCV NS5B RNA polymerase complexed with a novel non-competitive inhibitor. 分子名称: 3-(4-AMINO-2-TERT-BUTYL-5-METHYL-PHENYLSULFANYL)-6-CYCLOPENTYL-4-HYDROXY-6-[2-(4-HYDROXY-PHENYL)-ETHYL]-5,6-DIHYDRO-PYRAN-2-ONE, Hepatitis C virus NS5B RNA polymerase 著者 Love, R.A, Parge, H.E, Yu, X, Hickey, M.J, Diehl, W, Gao, J, Wriggers, H, Ekker, A, Wang, L, Thomson, J.A, Dragovich, P.S, Fuhrman, S.A. 登録日 2003-03-18 公開日 2004-03-18 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Crystallographic identification of a noncompetitive inhibitor binding site on the hepatitis C virus NS5B RNA polymerase enzyme. J.Virol., 77, 2003
1CSJ	CRYSTAL STRUCTURE OF THE RNA-DEPENDENT RNA POLYMERASE OF HEPATITIS C VIRUS 分子名称: HEPATITIS C VIRUS RNA POLYMERASE (NS5B) 著者 Bressanelli, S, Tomei, L, Roussel, A, Incitti, I, Vitale, R.L, Mathieu, M, De Francesco, R, Rey, F.A. 登録日 1999-08-18 公開日 1999-11-08 最終更新日 2013-02-13 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 Crystal structure of the RNA-dependent RNA polymerase of hepatitis C virus. Proc.Natl.Acad.Sci.USA, 96, 1999
3JB7	In situ structures of the segmented genome and RNA polymerase complex inside a dsRNA virus 分子名称: CPV RNA-dependent RNA polymerase, CYTIDINE-5'-TRIPHOSPHATE, GUANOSINE-5'-TRIPHOSPHATE, ... 著者 Zhang, X, Ding, K, Yu, X.K, Chang, W, Sun, J.C, Zhou, Z.H. 登録日 2015-08-03 公開日 2015-10-28 最終更新日 2024-05-15 実験手法 ELECTRON MICROSCOPY (4 Å) 主引用文献 In situ structures of the segmented genome and RNA polymerase complex inside a dsRNA virus. Nature, 527, 2015
2GHQ	CTD-specific phosphatase Scp1 in complex with peptide C-terminal domain of RNA polymerase II 分子名称: Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, DNA-directed RNA polymerase II largest subunit, MAGNESIUM ION 著者 Zhang, Y, Noel, J.P. 登録日 2006-03-27 公開日 2006-12-05 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (2.05 Å) 主引用文献 Determinants for dephosphorylation of the RNA polymerase II C-terminal domain by Scp1. Mol.Cell, 24, 2006
2GHT	CTD-specific phosphatase Scp1 in complex with peptide from C-terminal domain of RNA polymerase II 分子名称: Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, DNA-directed RNA polymerase II largest subunit, MAGNESIUM ION 著者 Zhang, Y, Noel, J.P. 登録日 2006-03-27 公開日 2006-12-05 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Determinants for dephosphorylation of the RNA polymerase II C-terminal domain by Scp1. Mol.Cell, 24, 2006
3JB6	In situ structures of the segmented genome and RNA polymerase complex inside a dsRNA virus 分子名称: GUANOSINE-5'-TRIPHOSPHATE, RNA-dependent RNA polymerase, VP1 CSP, ... 著者 Zhang, X, Ding, K, Yu, X.K, Chang, W, Sun, J.C, Zhou, Z.H. 登録日 2015-08-02 公開日 2015-10-28 最終更新日 2024-05-15 実験手法 ELECTRON MICROSCOPY (3.3 Å) 主引用文献 In situ structures of the segmented genome and RNA polymerase complex inside a dsRNA virus. Nature, 527, 2015
3GFK	Crystal structure of Bacillus subtilis Spx/RNA polymerase alpha subunit C-terminal domain complex 分子名称: DNA-directed RNA polymerase subunit alpha, Regulatory protein spx 著者 Lamour, V, Westblade, L.F, Campbell, E.A, Darst, S.A. 登録日 2009-02-27 公開日 2009-03-10 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Crystal structure of the in vivo-assembled Bacillus subtilis Spx/RNA polymerase alpha subunit C-terminal domain complex J.Struct.Biol., 168, 2009
1Z3E	Crystal Structure of Spx in Complex with the C-terminal Domain of the RNA Polymerase Alpha Subunit 分子名称: DNA-directed RNA polymerase alpha chain, Regulatory protein spx, SULFATE ION 著者 Newberry, K.J, Nakano, S, Zuber, P, Brennan, R.G. 登録日 2005-03-11 公開日 2005-10-11 最終更新日 2017-10-11 実験手法 X-RAY DIFFRACTION (1.5 Å) 主引用文献 Crystal structure of the Bacillus subtilis anti-alpha, global transcriptional regulator, Spx, in complex with the {alpha} C-terminal domain of RNA polymerase Proc.Natl.Acad.Sci.Usa, 102, 2005
3EF1	The Structure of Fcp1, an essential RNA polymerase II CTD phosphatase 分子名称: MAGNESIUM ION, RNA polymerase II subunit A C-terminal domain phosphatase 著者 Ghosh, A, Lima, C.D. 登録日 2008-09-07 公開日 2008-12-02 最終更新日 2017-10-25 実験手法 X-RAY DIFFRACTION (2.15 Å) 主引用文献 The structure of Fcp1, an essential RNA polymerase II CTD phosphatase. Mol.Cell, 32, 2008
1GX6	Hepatitis C Virus RNA polymerase in complex with UTP and manganese 分子名称: MANGANESE (II) ION, RNA-DIRECTED RNA POLYMERASE, URIDINE 5'-TRIPHOSPHATE 著者 Bressanelli, S, Rey, F.A. 登録日 2002-03-27 公開日 2002-04-10 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (1.85 Å) 主引用文献 A Structural Analysis of the Hepatitis C Virus RNA Polymerase in Complex with Ribonucleotides J.Virol., 76, 2002
2AUJ	Structure of Thermus aquaticus RNA polymerase beta'-subunit insert 分子名称: DNA-directed RNA polymerase beta' chain 著者 Chlenov, M, Masuda, S, Murakami, K.S, Nikiforov, V, Darst, S.A, Mustaev, A. 登録日 2005-08-27 公開日 2005-10-04 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (2.7 Å) 主引用文献 Structure and Function of Lineage-specific Sequence Insertions in the Bacterial RNA Polymerase beta' Subunit J.Mol.Biol., 353, 2005
2AUK	Structure of E. coli RNA polymerase beta' G/G' insert 分子名称: DNA-directed RNA polymerase beta' chain 著者 Chlenov, M, Masuda, S, Murakami, K.S, Nikiforov, V, Darst, S.A, Mustaev, A. 登録日 2005-08-28 公開日 2005-10-04 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Structure and Function of Lineage-specific Sequence Insertions in the Bacterial RNA Polymerase beta' Subunit J.Mol.Biol., 353, 2005

<18192021222324252627282930313233>