PDB: 41454 件ウェブページステータス検索Chemie searchBIRD

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3Q6V	Crystal Structure of Serratia fonticola Sfh-I: glycerol complex 分子名称: Beta-lactamase, GLYCEROL, ZINC ION 著者 Fonseca, F, Saavedra, M.J, Correia, A, Spencer, J. 登録日 2011-01-03 公開日 2011-07-13 最終更新日 2024-03-20 実験手法 X-RAY DIFFRACTION (1.37 Å) 主引用文献 Crystal structure of Serratia fonticola Sfh-I: activation of the nucleophile in mono-zinc metallo-beta-lactamases. J.Mol.Biol., 411, 2011
1WUU	crystal structure of human galactokinase complexed with MgAMPPNP and galactose 分子名称: Galactokinase, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, ... 著者 Thoden, J.B, Timson, D.J, Reece, R.J, Holden, H.M. 登録日 2004-12-08 公開日 2004-12-28 最終更新日 2020-07-29 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Molecular Structure of Human Galactokinase: IMPLICATIONS FOR TYPE II GALACTOSEMIA J.Biol.Chem., 280, 2005
4GHU	Crystal structure of TRAF3/Cardif 分子名称: Mitochondrial antiviral-signaling protein, TNF receptor-associated factor 3 著者 Zhang, P. 登録日 2012-08-08 公開日 2012-11-28 実験手法 X-RAY DIFFRACTION (2.199 Å) 主引用文献 Single Amino Acid Substitutions Confer the Antiviral Activity of the TRAF3 Adaptor Protein onto TRAF5 Sci.Signal., 5, 2012
6EO1	The electron crystallography structure of the cAMP-bound potassium channel MloK1 (PCO-refined) 分子名称: Cyclic nucleotide-gated potassium channel mll3241, POTASSIUM ION 著者 Kowal, J, Biyani, N, Chami, M, Scherer, S, Rzepiela, A, Baumgartner, P, Upadhyay, V, Nimigean, C, Stahlberg, H. 登録日 2017-10-08 公開日 2017-12-27 最終更新日 2024-05-15 実験手法 ELECTRON CRYSTALLOGRAPHY (4.5 Å) 主引用文献 High-Resolution Cryoelectron Microscopy Structure of the Cyclic Nucleotide-Modulated Potassium Channel MloK1 in a Lipid Bilayer. Structure, 26, 2018
3ITY	Metal-free form of Pseudomonas stutzeri L-rhamnose isomerase 分子名称: L-rhamnose isomerase 著者 Yoshida, H, Yamaji, M, Ishii, T, Izumori, K, Kamitori, S. 登録日 2009-08-28 公開日 2010-02-02 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (1.84 Å) 主引用文献 Catalytic reaction mechanism of Pseudomonas stutzeri l-rhamnose isomerase deduced from X-ray structures Febs J., 277, 2010
3NOS	HUMAN ENDOTHELIAL NITRIC OXIDE SYNTHASE WITH ARGININE SUBSTRATE 分子名称: 5,6,7,8-TETRAHYDROBIOPTERIN, ENDOTHELIAL NITRIC-OXIDE SYNTHASE, N-OMEGA-HYDROXY-L-ARGININE, ... 著者 Fischmann, T.O, Weber, P.C. 登録日 1999-02-03 公開日 2000-02-04 最終更新日 2023-12-27 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 Structural characterization of nitric oxide synthase isoforms reveals striking active-site conservation. Nat.Struct.Biol., 6, 1999
3ITO	Crystal structure of Pseudomonas stutzeri L-rhamnose isomerase mutant D327N in complex with D-psicose 分子名称: L-rhamnose isomerase, MANGANESE (II) ION, alpha-D-psicofuranose 著者 Yoshida, H, Yamaji, M, Ishii, T, Izumori, K, Kamitori, S. 登録日 2009-08-28 公開日 2010-02-02 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Catalytic reaction mechanism of Pseudomonas stutzeri l-rhamnose isomerase deduced from X-ray structures Febs J., 277, 2010
6EMN	HtxB from Pseudomonas stutzeri in complex with phosphite to 1.25 A resolution 分子名称: 1,2-ETHANEDIOL, MAGNESIUM ION, Probable phosphite transport system-binding protein HtxB, ... 著者 Bisson, C, Robertson, A.J, Hitchcock, A, Adams, N.B. 登録日 2017-10-03 公開日 2019-04-17 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (1.25 Å) 主引用文献 Phosphite binding by the HtxB periplasmic binding protein depends on the protonation state of the ligand. Sci Rep, 9, 2019
6EMW	Structure of S.aureus ClpC in complex with MecA 分子名称: ATP-dependent Clp protease ATP-binding subunit, ATP-dependent Clp protease ATP-binding subunit ClpC, Adapter protein MecA, ... 著者 Carroni, M, Mogk, A, Bukau, B, Franke, K. 登録日 2017-10-03 公開日 2017-12-27 最終更新日 2024-05-15 実験手法 ELECTRON MICROSCOPY (11 Å) 主引用文献 Regulatory coiled-coil domains promote head-to-head assemblies of AAA+ chaperones essential for tunable activity control. Elife, 6, 2017
6EKB	Crystal structure of the BSD2 homolog of Arabidopsis thaliana 分子名称: DnaJ/Hsp40 cysteine-rich domain superfamily protein, ZINC ION 著者 Aigner, H, Wilson, R.H, Bracher, A, Calisse, L, Bhat, J.Y, Hartl, F.U, Hayer-Hartl, M. 登録日 2017-09-26 公開日 2017-12-06 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Plant RuBisCo assembly in E. coli with five chloroplast chaperones including BSD2. Science, 358, 2017
3VQG	Crystal Structure Analysis of the PDZ Domain Derived from the Tight Junction Regulating Protein 分子名称: C-terminal peptide from Immunoglobulin superfamily member 5, E3 ubiquitin-protein ligase LNX, SULFATE ION 著者 Akiyoshi, Y, Hamada, D, Goda, N, Tenno, T, Narita, H, Nakagawa, A, Furuse, M, Suzuki, M, Hiroaki, H. 登録日 2012-03-23 公開日 2013-03-27 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (1.35 Å) 主引用文献 Structural basis for down regulation of tight junction by PDZ-domain containing E3-Ubiquitin ligase To be Published
6EKC	Crystal structure of the BSD2 homolog of Arabidopsis thaliana bound to the octameric assembly of RbcL from Thermosynechococcus elongatus 分子名称: DnaJ/Hsp40 cysteine-rich domain superfamily protein, Ribulose bisphosphate carboxylase large chain, ZINC ION 著者 Aigner, H, Wilson, R.H, Bracher, A, Calisse, L, Bhat, J.Y, Hartl, F.U, Hayer-Hartl, M. 登録日 2017-09-26 公開日 2017-12-06 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (2.63 Å) 主引用文献 Plant RuBisCo assembly in E. coli with five chloroplast chaperones including BSD2. Science, 358, 2017
3ITT	Crystal structure of Pseudomonas stutzeri L-rhamnose isomerase mutant S329K in complex with L-rhamnose 分子名称: L-RHAMNOSE, L-rhamnose isomerase, MANGANESE (II) ION 著者 Yoshida, H, Yamaji, M, Ishii, T, Izumori, K, Kamitori, S. 登録日 2009-08-28 公開日 2010-02-02 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (1.96 Å) 主引用文献 Catalytic reaction mechanism of Pseudomonas stutzeri l-rhamnose isomerase deduced from X-ray structures Febs J., 277, 2010
1X82	CRYSTAL STRUCTURE OF PHOSPHOGLUCOSE ISOMERASE FROM PYROCOCCUS FURIOSUS WITH BOUND 5-phospho-D-arabinonate 分子名称: 5-PHOSPHOARABINONIC ACID, Glucose-6-phosphate isomerase 著者 Berrisford, J.M, Akerboom, J, Brouns, S, Sedelnikova, S.E, Turnbull, A.P, van der Oost, J, Salmon, L, Hardre, R, Murray, I.A, Blackburn, G.M, Rice, D.W, Baker, P.J. 登録日 2004-08-17 公開日 2004-10-12 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (1.5 Å) 主引用文献 The structures of inhibitor complexes of Pyrococcus furiosus phosphoglucose isomerase provide insights into substrate binding and catalysis. J.Mol.Biol., 343, 2004
1XG3	Crystal structure of the C123S 2-methylisocitrate lyase mutant from Escherichia coli in complex with the reaction product, Mg(II)-pyruvate and succinate 分子名称: MAGNESIUM ION, PYRUVIC ACID, Probable methylisocitrate lyase, ... 著者 Liu, S, Lu, Z, Han, Y, Melamud, E, Dunaway-Mariano, D, Herzberg, O. 登録日 2004-09-16 公開日 2005-03-01 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Crystal Structures of 2-Methylisocitrate Lyase in Complex with Product and with Isocitrate Inhibitor Provide Insight into Lyase Substrate Specificity, Catalysis and Evolution Biochemistry, 44, 2005
1XG4	Crystal Structure of the C123S 2-Methylisocitrate Lyase Mutant from Escherichia coli in complex with the inhibitor isocitrate 分子名称: ISOCITRIC ACID, MAGNESIUM ION, Probable methylisocitrate lyase 著者 Liu, S, Lu, Z, Han, Y, Melamud, E, Dunaway-Mariano, D, Herzberg, O. 登録日 2004-09-16 公開日 2005-03-01 最終更新日 2023-08-23 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 Crystal Structures of 2-Methylisocitrate Lyase in Complex with Product and with Isocitrate Inhibitor Provide Insight into Lyase Substrate Specificity, Catalysis and Evolution Biochemistry, 44, 2005
1X7N	The crystal structure of Pyrococcus furiosus phosphoglucose isomerase with bound 5-phospho-D-arabinonate and Manganese 分子名称: 5-PHOSPHOARABINONIC ACID, Glucose-6-phosphate isomerase, MANGANESE (II) ION 著者 Berrisford, J.M, Akerboom, J, Brouns, S, Sedelnikova, S.E, Turnbull, A.P, van der Oost, J, Salmon, L, Hardre, R, Murray, I.A, Blackburn, G.M, Rice, D.W, Baker, P.J. 登録日 2004-08-16 公開日 2004-10-12 最終更新日 2023-08-23 実験手法 X-RAY DIFFRACTION (1.89 Å) 主引用文献 The structures of inhibitor complexes of Pyrococcus furiosus phosphoglucose isomerase provide insights into substrate binding and catalysis. J.Mol.Biol., 343, 2004
1ZA3	The crystal structure of the YSd1 Fab bound to DR5 分子名称: Fab-YSd1 heavy chain, Fab-YSd1 light chain, Tumor necrosis factor receptor superfamily member 10B 著者 Fellouse, F.A, Li, B, Compaan, D.M, Peden, A.A, Hymowitz, S.G, Sidhu, S.S. 登録日 2005-04-05 公開日 2005-06-14 最終更新日 2023-08-23 実験手法 X-RAY DIFFRACTION (3.35 Å) 主引用文献 Molecular recognition by a binary code. J.Mol.Biol., 348, 2005
3ITL	Crystal structure of Pseudomonas stutzeri L-rhamnose isomerase mutant D327N in complex with L-rhamnulose 分子名称: 6-deoxy-beta-L-fructofuranose, L-rhamnose isomerase, MANGANESE (II) ION 著者 Yoshida, H, Yamaji, M, Ishii, T, Izumori, K, Kamitori, S. 登録日 2009-08-28 公開日 2010-02-02 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 Catalytic reaction mechanism of Pseudomonas stutzeri l-rhamnose isomerase deduced from X-ray structures Febs J., 277, 2010
3IUI	Zn2+-bound form of Pseudomonas stutzeri L-rhamnose isomerase 分子名称: L-rhamnose isomerase, ZINC ION 著者 Yoshida, H, Yamaji, M, Ishii, T, Izumori, K, Kamitori, S. 登録日 2009-08-31 公開日 2010-02-02 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Catalytic reaction mechanism of Pseudomonas stutzeri l-rhamnose isomerase deduced from X-ray structures Febs J., 277, 2010
3IUD	Cu2+-bound form of Pseudomonas stutzeri L-rhamnose isomerase 分子名称: COPPER (II) ION, L-rhamnose isomerase 著者 Yoshida, H, Yamaji, M, Ishii, T, Izumori, K, Kamitori, S. 登録日 2009-08-31 公開日 2010-02-02 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (2.44 Å) 主引用文献 Catalytic reaction mechanism of Pseudomonas stutzeri l-rhamnose isomerase deduced from X-ray structures Febs J., 277, 2010
6F2G	Bacterial asc transporter crystal structure in open to in conformation 分子名称: Nanobody 74, Putative amino acid/polyamine transport protein, ZINC ION 著者 Fort, J, Errasti-Murugarren, E, Carpena, X, Palacin, M, Fita, I. 登録日 2017-11-24 公開日 2019-04-24 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (2.92 Å) 主引用文献 L amino acid transporter structure and molecular bases for the asymmetry of substrate interaction. Nat Commun, 10, 2019
3ITX	Mn2+ bound form of Pseudomonas stutzeri L-rhamnose isomerase 分子名称: L-rhamnose isomerase, MANGANESE (II) ION 著者 Yoshida, H, Yamaji, M, Ishii, T, Izumori, K, Kamitori, S. 登録日 2009-08-28 公開日 2010-02-02 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Catalytic reaction mechanism of Pseudomonas stutzeri l-rhamnose isomerase deduced from X-ray structures Febs J., 277, 2010
6F2F	Crystal structure of Protease 1 from Pyrococcus Horikoshii co-cystallized in presence of 10 mM Tb-Xo4 and ammonium sulfate. 分子名称: Deglycase PH1704, Dihydroxyacetone, SULFATE ION, ... 著者 Engilberge, S, Riobe, F, Di Pietro, S, Franzetti, B, Girard, E, Dumont, E, Maury, O. 登録日 2017-11-24 公開日 2018-10-03 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (1.65 Å) 主引用文献 Unveiling the Binding Modes of the Crystallophore, a Terbium-based Nucleating and Phasing Molecular Agent for Protein Crystallography. Chemistry, 24, 2018
1HQ5	CRYSTAL STRUCTURE OF THE BINUCLEAR MANGANESE METALLOENZYME ARGINASE COMPLEXED WITH S-(2-BORONOETHYL)-L-CYSTEINE, AN L-ARGININE ANALOGUE 分子名称: ARGINASE 1, MANGANESE (II) ION, S-2-(BORONOETHYL)-L-CYSTEINE 著者 Kim, N.N, Cox, J.D, Baggio, R.F, Emig, F.A, Mistry, S.K, Harper, S.L, Speicher, D.W, Morris Jr, S.M, Ash, D.E, Traish, A, Christianson, D.W. 登録日 2000-12-14 公開日 2001-04-04 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Probing erectile function: S-(2-boronoethyl)-L-cysteine binds to arginase as a transition state analogue and enhances smooth muscle relaxation in human penile corpus cavernosum. Biochemistry, 40, 2001

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