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5HRX
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Crystal structure of the fifth bromodomain of human PB1 in complex with 1-butylisochromeno[3,4-c]pyrazol-5(2H)-one) compound
分子名称: 1,2-ETHANEDIOL, 1-butylisochromeno[3,4-c]pyrazol-5(3H)-one, Protein polybromo-1
著者Tallant, C, Myrianthopoulos, V, Gaboriaud-Kolar, N, Newman, J.A, Picaud, S, von Delft, F, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Mikros, E, Knapp, S.
登録日2016-01-24
公開日2016-10-12
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.73 Å)
主引用文献Discovery and Optimization of a Selective Ligand for the Switch/Sucrose Nonfermenting-Related Bromodomains of Polybromo Protein-1 by the Use of Virtual Screening and Hydration Analysis.
J.Med.Chem., 59, 2016
5HRW
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Crystal structure of the fifth bromodomain of human PB1 in complex with 1-propylisochromeno[3,4-c]pyrazol-5(2H)-one) compound
分子名称: 1,2-ETHANEDIOL, 1-propylisochromeno[3,4-c]pyrazol-5(3H)-one, Protein polybromo-1, ...
著者Tallant, C, Myrianthopoulos, V, Gaboriaud-Kolar, N, Newman, J.A, Picaud, S, von Delft, F, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Mikros, E, Knapp, S.
登録日2016-01-24
公開日2016-10-12
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Discovery and Optimization of a Selective Ligand for the Switch/Sucrose Nonfermenting-Related Bromodomains of Polybromo Protein-1 by the Use of Virtual Screening and Hydration Analysis.
J.Med.Chem., 59, 2016
5JRG
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BU of 5jrg by Molmil
Crystal structure of the nucleosome containing the DNA with tetrahydrofuran (THF)
分子名称: CHLORIDE ION, DNA (145-MER), Histone H2A type 1-B/E, ...
著者Osakabe, A, Arimura, Y, Horikoshi, N, Kurumizaka, H.
登録日2016-05-06
公開日2017-03-08
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Polymorphism of apyrimidinic DNA structures in the nucleosome
Sci Rep, 7, 2017
2YT4
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BU of 2yt4 by Molmil
Crystal structure of human DGCR8 core
分子名称: Protein DGCR8
著者Cho, Y, Sohn, S.Y.
登録日2007-04-05
公開日2007-08-21
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Crystal structure of human DGCR8 core
Nat.Struct.Mol.Biol., 14, 2007
1TGZ
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BU of 1tgz by Molmil
Structure of human Senp2 in complex with SUMO-1
分子名称: SULFATE ION, Sentrin-specific protease 2, Ubiquitin-like protein SMT3C
著者Reverter, D, Lima, C.D.
登録日2004-05-31
公開日2004-09-14
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献A basis for SUMO protease specificity provided by analysis of human Senp2 and a Senp2-SUMO complex
Structure, 12, 2004
1WXP
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BU of 1wxp by Molmil
Solution structure of the death domain of nuclear matrix protein p84
分子名称: THO complex subunit 1
著者Niraula, T.N, Koshiba, S, Inoue, M, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2005-01-28
公開日2005-07-28
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Solution structure of the death domain of nuclear matrix protein p84
To be Published
1WF1
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BU of 1wf1 by Molmil
Solution structure of RRM domain in RNA-binding protein NP_057951
分子名称: RNA-binding protein Raly
著者He, F, Muto, Y, Inoue, M, Kigawa, T, Shirouzu, M, Terada, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2004-05-25
公開日2004-11-25
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Solution structure of RRM domain in RNA-binding protein NP_057951
To be Published
3LQV
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BU of 3lqv by Molmil
Branch Recognition by SF3b14
分子名称: ADENINE, Pre-mRNA branch site protein p14, Splicing factor 3B subunit 1
著者Schellenberg, M.J, MacMillan, A.M.
登録日2010-02-10
公開日2011-01-26
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.38 Å)
主引用文献Branch Recognition by SF3b14
Rna, 17, 2011
1X5P
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BU of 1x5p by Molmil
Solution structure of RRM domain in Parp14
分子名称: Negative elongation factor E
著者Dang, W, Muto, Y, Inoue, M, Kigawa, T, Shirouzu, M, Terada, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2005-05-16
公開日2005-11-16
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Solution structure of RRM domain in Parp14
To be Published
1X4F
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BU of 1x4f by Molmil
Solution structure of the second RRM domain in Matrin 3
分子名称: Matrin 3
著者He, F, Muto, Y, Inoue, M, Kigawa, T, Shirouzu, M, Terada, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2005-05-14
公開日2005-11-14
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Solution structure of the second RRM domain in Matrin 3
To be Published
1UFG
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BU of 1ufg by Molmil
Solution structure of immunoglobulin like domain of mouse nuclear lamin
分子名称: Lamin A
著者Kobayashi, N, Kigawa, T, Koshiba, S, Inoue, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2003-05-29
公開日2004-06-22
最終更新日2023-12-27
実験手法SOLUTION NMR
主引用文献Solution structure of immunoglobulin like domain of mouse nuclear lamin
To be Published
3O36
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BU of 3o36 by Molmil
Crystal structure of TRIM24 PHD-Bromo complexed with H4(14-19)K16ac peptide
分子名称: Histone H4, Transcription intermediary factor 1-alpha, ZINC ION
著者Wang, Z, Patel, D.J.
登録日2010-07-23
公開日2010-12-15
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献TRIM24 links a non-canonical histone signature to breast cancer.
Nature, 468, 2010
1F3W
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BU of 1f3w by Molmil
RECOMBINANT RABBIT MUSCLE PYRUVATE KINASE
分子名称: MANGANESE (II) ION, POTASSIUM ION, PYRUVATE KINASE, ...
著者Wooll, J.O, Friesen, R.H.E, White, M.A, Watowich, S.J, Fox, R.O, Lee, J.C, Czerwinski, E.W.
登録日2000-06-06
公開日2001-10-03
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Structural and functional linkages between subunit interfaces in mammalian pyruvate kinase.
J.Mol.Biol., 312, 2001
3NQU
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BU of 3nqu by Molmil
Crystal structure of partially trypsinized (CENP-A/H4)2 heterotetramer
分子名称: Histone H3-like centromeric protein A, Histone H4, SULFATE ION
著者Sekulic, N, Black, B.E.
登録日2010-06-29
公開日2010-08-25
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献The structure of (CENP-A-H4)(2) reveals physical features that mark centromeres.
Nature, 467, 2010
1R49
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BU of 1r49 by Molmil
Human topoisomerase I (Topo70) double mutant K532R/Y723F
分子名称: 5'-D(*AP*AP*AP*AP*AP*GP*AP*CP*TP*TP*AP*GP*AP*AP*AP*AP*AP*TP*TP*TP*TP*T)-3', 5'-D(P*AP*AP*AP*AP*AP*TP*TP*TP*TP*TP*CP*TP*AP*AP*GP*TP*CP*TP*TP*TP*TP*T)-3', DNA topoisomerase I
著者Interthal, H, Quigley, P.M, Hol, W.G, Champoux, J.J.
登録日2003-10-03
公開日2003-12-16
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (3.13 Å)
主引用文献The role of lysine 532 in the catalytic mechanism of human topoisomerase I.
J.Biol.Chem., 279, 2004
1F3X
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BU of 1f3x by Molmil
S402P MUTANT OF RABBIT MUSCLE PYRUVATE KINASE
分子名称: MANGANESE (II) ION, POTASSIUM ION, PYRUVATE KINASE, ...
著者Wooll, J.O, Friesen, R.H.E, White, M.A, Watowich, S.J, Fox, R.O, Lee, J.C, Czerwinski, E.W.
登録日2000-06-06
公開日2001-10-03
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structural and functional linkages between subunit interfaces in mammalian pyruvate kinase.
J.Mol.Biol., 312, 2001
3A6N
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BU of 3a6n by Molmil
The nucleosome containing a testis-specific histone variant, human H3T
分子名称: 146-MER DNA, CHLORIDE ION, Histone H2A type 1-B/E, ...
著者Tachiwana, H, Kagawa, W, Osakabe, A, Koichiro, K, Shiga, T, Kimura, H, Kurumizaka, H.
登録日2009-09-04
公開日2010-05-26
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Structural basis of instability of the nucleosome containing a testis-specific histone variant, human H3T
Proc.Natl.Acad.Sci.USA, 107, 2010
1SEU
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BU of 1seu by Molmil
Human DNA Topoisomerase I (70 Kda) In Complex With The Indolocarbazole SA315F and Covalent Complex With A 22 Base Pair DNA Duplex
分子名称: 2,10-DIHYDROXY-12-(BETA-D-GLUCOPYRANOSYL)-6,7,12,13-TETRAHYDROINDOLO[2,3-A]PYRROLO[3,4-C]CARBAZOLE-5,7-DIONE, 5'-D(*(TGP)P*GP*AP*AP*AP*AP*AP*TP*TP*TP*TP*T)-3', 5'-D(*AP*AP*AP*AP*AP*GP*AP*CP*TP*T)-3', ...
著者Staker, B.L, Feese, M.D, Cushman, M, Pommier, Y, Zembower, D, Stewart, L, Burgin, A.B.
登録日2004-02-18
公開日2005-04-19
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Structures of three classes of anticancer agents bound to the human topoisomerase I-DNA covalent complex
J.Med.Chem., 48, 2005
1T5A
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BU of 1t5a by Molmil
Human Pyruvate Kinase M2
分子名称: 1,6-di-O-phosphono-beta-D-fructofuranose, GLYCEROL, MAGNESIUM ION, ...
著者Dombrauckas, J.D, Santarsiero, B.D, Mesecar, A.D.
登録日2004-05-03
公開日2005-07-12
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structural basis for tumor pyruvate kinase M2 allosteric regulation and catalysis.
Biochemistry, 44, 2005
1X6E
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BU of 1x6e by Molmil
Solution structures of the C2H2 type zinc finger domain of human Zinc finger protein 24
分子名称: ZINC ION, Zinc finger protein 24
著者Sato, M, Tomizawa, T, Koshiba, S, Inoue, M, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2005-05-17
公開日2005-11-17
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Solution structures of the C2H2 type zinc finger domain of human Zinc finger protein 24
To be Published
3AFA
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BU of 3afa by Molmil
The human nucleosome structure
分子名称: 146-MER DNA, CHLORIDE ION, Histone H2A type 1-B/E, ...
著者Tachiwana, H, Kagawa, W, Osakabe, A, Koichiro, K, Shiga, T, Kimura, H, Kurumizaka, H.
登録日2010-02-24
公開日2010-05-26
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structural basis of instability of the nucleosome containing a testis-specific histone variant, human H3T
Proc.Natl.Acad.Sci.USA, 107, 2010
5T2C
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BU of 5t2c by Molmil
CryoEM structure of the human ribosome at 3.6 Angstrom resolution
分子名称: 18S rRNA, 28S rRNA, 40S ribosomal protein S10, ...
著者Zhang, X, Lai, M, Zhou, Z.H.
登録日2016-08-23
公開日2017-01-25
最終更新日2023-08-16
実験手法ELECTRON MICROSCOPY (3.6 Å)
主引用文献Structures and stabilization of kinetoplastid-specific split rRNAs revealed by comparing leishmanial and human ribosomes.
Nat Commun, 7, 2016
3O33
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BU of 3o33 by Molmil
Crystal structure of TRIM24 PHD-Bromo in the free state
分子名称: Transcription intermediary factor 1-alpha, ZINC ION
著者Wang, Z, Patel, D.J.
登録日2010-07-23
公開日2010-12-15
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献TRIM24 links a non-canonical histone signature to breast cancer.
Nature, 468, 2010
1U9B
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BU of 1u9b by Molmil
MURINE/HUMAN UBIQUITIN-CONJUGATING ENZYME UBC9
分子名称: UBIQUITIN-CONJUGATING ENZYME E9
著者Tong, H, Hateboer, G, Perrakis, A, Bernards, R, Sixma, T.K.
登録日1997-05-20
公開日1997-07-07
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structure of murine/human Ubc9 provides insight into the variability of the ubiquitin-conjugating system.
J.Biol.Chem., 272, 1997
3AZL
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BU of 3azl by Molmil
Crystal Structure of Human Nucleosome Core Particle Containing H4K77Q mutation
分子名称: 146-MER DNA, CHLORIDE ION, Histone H2A type 1-B/E, ...
著者Iwasaki, W, Tachiwana, H, Kawaguchi, K, Shibata, T, Kagawa, W, Kurumizaka, H.
登録日2011-05-25
公開日2011-09-21
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Comprehensive Structural Analysis of Mutant Nucleosomes Containing Lysine to Glutamine (KQ) Substitutions in the H3 and H4 Histone-Fold Domains
Biochemistry, 50, 2011

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