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4QXX
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BU of 4qxx by Molmil
Structure of the amyloid forming peptide GNLVS (residues 26-30) from the eosinophil major basic protein (EMBP)
分子名称: Bone marrow proteoglycan
著者Soriaga, A.B, Soragni, A, Sawaya, M.R, Eisenberg, D.
登録日2014-07-22
公開日2015-03-18
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.445 Å)
主引用文献Toxicity of Eosinophil MBP Is Repressed by Intracellular Crystallization and Promoted by Extracellular Aggregation.
Mol.Cell, 57, 2015
8ATF
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BU of 8atf by Molmil
Nucleosome-bound Ino80 ATPase
分子名称: ADENOSINE-5'-DIPHOSPHATE, DNA (226-MER), DNA (227-MER), ...
著者Kunert, F, Metzner, F.J, Eustermann, S, Jung, J, Woike, S, Schall, K, Kostrewa, D, Hopfner, K.P.
登録日2022-08-23
公開日2022-12-14
最終更新日2024-07-24
実験手法ELECTRON MICROSCOPY (3.45 Å)
主引用文献Structural mechanism of extranucleosomal DNA readout by the INO80 complex.
Sci Adv, 8, 2022
2FHO
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BU of 2fho by Molmil
NMR solution structure of the human spliceosomal protein complex p14-SF3b155
分子名称: spliceosomal protein SF3b155, spliceosomal protein p14
著者Kuwasako, K, Dohmae, N, Inoue, M, Shirouzu, M, Guntert, P, Seraphin, B, Muto, Y, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2005-12-26
公開日2006-12-26
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献NMR solution structure of the human spliceosomal protein complex p14-SF3b155
To be Published
3WWX
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BU of 3wwx by Molmil
Crystal structure of D-stereospecific amidohydrolase from Streptomyces sp. 82F2
分子名称: OCTANE 1,8-DIAMINE, S12 family peptidase
著者Arima, J, Nagano, S, Hino, T, Shimone, K, Isoda, Y, Mori, N.
登録日2014-07-03
公開日2015-07-08
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (1.49 Å)
主引用文献Crystal structure of D-stereospecific amidohydrolase from Streptomyces sp. 82F2 - insight into the structural factors for substrate specificity.
Febs J., 283, 2016
1QKQ
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BU of 1qkq by Molmil
CHARCOT-LEYDEN CRYSTAL PROTEIN - MANNOSE COMPLEX
分子名称: EOSINOPHIL LYSOPHOSPHOLIPASE, alpha-D-mannopyranose
著者Swaminathan, G.J, Leonidas, D.D, Acharya, K.R.
登録日1999-07-31
公開日2000-01-18
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Selective recognition of mannose by the human eosinophil Charcot-Leyden crystal protein (galectin-10): a crystallographic study at 1.8 A resolution.
Biochemistry, 38, 1999
8H6K
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BU of 8h6k by Molmil
Cryo-EM structure of human exon-defined spliceosome in the mature B state.
分子名称: 116 kDa U5 small nuclear ribonucleoprotein component, GUANOSINE-5'-TRIPHOSPHATE, INOSITOL HEXAKISPHOSPHATE, ...
著者Zhang, W, Zhan, X, Zhang, X, Bai, R, Lei, J, Yan, C, Shi, Y.
登録日2022-10-18
公開日2024-05-01
最終更新日2024-10-30
実験手法ELECTRON MICROSCOPY (2.7 Å)
主引用文献Structural insights into human exon-defined spliceosome prior to activation.
Cell Res., 34, 2024
8H6E
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BU of 8h6e by Molmil
Cryo-EM structure of human exon-defined spliceosome in the late pre-B state.
分子名称: 116 kDa U5 small nuclear ribonucleoprotein component, GUANOSINE-5'-TRIPHOSPHATE, INOSITOL HEXAKISPHOSPHATE, ...
著者Zhang, W, Zhan, X, Zhang, X, Bai, R, Lei, J, Yan, C, Shi, Y.
登録日2022-10-17
公開日2024-05-01
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Structural insights into human exon-defined spliceosome prior to activation.
Cell Res., 34, 2024
8H6J
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BU of 8h6j by Molmil
Cryo-EM structure of human exon-defined spliceosome in the mature pre-B state.
分子名称: 116 kDa U5 small nuclear ribonucleoprotein component, GUANOSINE-5'-TRIPHOSPHATE, INOSITOL HEXAKISPHOSPHATE, ...
著者Zhang, W, Zhan, X, Zhang, X, Lei, J, Yan, C, Shi, Y.
登録日2022-10-18
公開日2024-05-01
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (3.25 Å)
主引用文献Structural insights into human exon-defined spliceosome prior to activation.
Cell Res., 34, 2024
8H6L
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BU of 8h6l by Molmil
Cryo-EM structure of human exon-defined spliceosome in the early B state.
分子名称: 116 kDa U5 small nuclear ribonucleoprotein component, GUANOSINE-5'-TRIPHOSPHATE, INOSITOL HEXAKISPHOSPHATE, ...
著者Zhang, W, Zhan, X, Zhang, X, Bai, R, Lei, J, Yan, C, Shi, Y.
登録日2022-10-18
公開日2024-05-01
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (2.6 Å)
主引用文献Structural insights into human exon-defined spliceosome prior to activation.
Cell Res., 34, 2024
7DCO
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BU of 7dco by Molmil
Cryo-EM structure of the activated spliceosome (Bact complex) at an atomic resolution of 2.5 angstrom
分子名称: BJ4_G0014900.mRNA.1.CDS.1, BJ4_G0027490.mRNA.1.CDS.1, BJ4_G0037700.mRNA.1.CDS.1, ...
著者Bai, R, Wan, R, Yan, C, Qi, J, Zhang, P, Lei, J, Shi, Y.
登録日2020-10-26
公開日2021-03-17
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (2.5 Å)
主引用文献Mechanism of spliceosome remodeling by the ATPase/helicase Prp2 and its coactivator Spp2.
Science, 371, 2021
8VWS
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BU of 8vws by Molmil
Nucleosome containing 8oxoG at SHL-6
分子名称: 601 I strand (non-damaged strand), 601 J strand (damaged strand), Histone H2A type 1, ...
著者Weaver, T.M, Ling, J.A, Freudenthal, B.D.
登録日2024-02-02
公開日2024-10-30
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献Nucleosome containing 8oxoG at SHL-6
To Be Published
8VWU
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BU of 8vwu by Molmil
Nucleosome containing 8oxoG at SHL4
分子名称: 601 I strand (damaged strand), 601 J strand (non-damaged strand), Histone H2A type 1, ...
著者Weaver, T.M, Ling, J.A, Freudenthal, B.D.
登録日2024-02-02
公開日2024-10-30
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献Nucleosome containing 8oxoG at SHL4
To Be Published
1JIM
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BU of 1jim by Molmil
STEREOSPECIFIC REACTION OF 3-METHOXY-4-CHLORO-7-AMINOISOCOUMARIN WITH CRYSTALLINE PORCINE PANCREATIC ELASTASE
分子名称: METHYL(2-ACETOXY-2-(2-CARBOXY-4-AMINO-PHENYL))ACETATE, PORCINE PANCREATIC ELASTASE, SULFATE ION
著者Meyer, E.
登録日1993-03-19
公開日1994-01-31
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (2.31 Å)
主引用文献Stereospecific Reaction of 3-Methoxy-4-Chloro-7-Aminoisocoumarin with Crystalline Porcine Pancreatic Elastase
J.Am.Chem.Soc., 107, 1985
7KBE
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BU of 7kbe by Molmil
Nucleosome isolated from metaphase chromosome formed in Xenopus egg extract (oligo fraction)
分子名称: DNA (157-MER), Histone H2A, Histone H2B 1.1, ...
著者Arimura, Y, Funabiki, H.
登録日2020-10-02
公開日2021-09-15
最終更新日2024-05-29
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献Structural features of nucleosomes in interphase and metaphase chromosomes.
Mol.Cell, 81, 2021
7KBD
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BU of 7kbd by Molmil
Nucleosome in interphase chromosome formed in Xenopus egg extract (oligo fraction)
分子名称: DNA (151-MER), Histone H2A, Histone H2B 1.1, ...
著者Arimura, Y, Funabiki, H.
登録日2020-10-02
公開日2021-09-15
最終更新日2024-05-29
実験手法ELECTRON MICROSCOPY (3.38 Å)
主引用文献Structural features of nucleosomes in interphase and metaphase chromosomes.
Mol.Cell, 81, 2021
8QVZ
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BU of 8qvz by Molmil
Human NDPK-C in complex with cAMP
分子名称: ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE, Nucleoside diphosphate kinase 3, SULFATE ION
著者Werten, S, Amjadi, R, Scheffzek, K.
登録日2023-10-18
公開日2024-09-18
最終更新日2024-10-09
実験手法X-RAY DIFFRACTION (1.774 Å)
主引用文献Mechanistic Insights into Substrate Recognition of Human Nucleoside Diphosphate Kinase C Based on Nucleotide-Induced Structural Changes.
Int J Mol Sci, 25, 2024
8QW1
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BU of 8qw1 by Molmil
Human NDPK-C in complex with ADP and Mg2+
分子名称: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, Nucleoside diphosphate kinase 3
著者Werten, S, Amjadi, R, Scheffzek, K.
登録日2023-10-18
公開日2024-09-18
最終更新日2024-10-09
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Mechanistic Insights into Substrate Recognition of Human Nucleoside Diphosphate Kinase C Based on Nucleotide-Induced Structural Changes.
Int J Mol Sci, 25, 2024
8QW2
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BU of 8qw2 by Molmil
Human NDPK-C in complex with UDP and Mg2+
分子名称: MAGNESIUM ION, Nucleoside diphosphate kinase 3, URIDINE-5'-DIPHOSPHATE
著者Werten, S, Amjadi, R, Scheffzek, K.
登録日2023-10-18
公開日2024-09-18
最終更新日2024-10-09
実験手法X-RAY DIFFRACTION (1.87 Å)
主引用文献Mechanistic Insights into Substrate Recognition of Human Nucleoside Diphosphate Kinase C Based on Nucleotide-Induced Structural Changes.
Int J Mol Sci, 25, 2024
8QW0
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BU of 8qw0 by Molmil
Human NDPK-C in complex with GDP
分子名称: GUANOSINE-5'-DIPHOSPHATE, Nucleoside diphosphate kinase 3, SULFATE ION
著者Werten, S, Amjadi, R, Scheffzek, K.
登録日2023-10-18
公開日2024-09-18
最終更新日2024-10-09
実験手法X-RAY DIFFRACTION (2.175 Å)
主引用文献Mechanistic Insights into Substrate Recognition of Human Nucleoside Diphosphate Kinase C Based on Nucleotide-Induced Structural Changes.
Int J Mol Sci, 25, 2024
8QW3
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BU of 8qw3 by Molmil
Human NDPK-C in complex with ADP
分子名称: ADENOSINE-5'-DIPHOSPHATE, Nucleoside diphosphate kinase 3, SULFATE ION
著者Werten, S, Amjadi, R, Scheffzek, K.
登録日2023-10-18
公開日2024-09-18
最終更新日2024-10-09
実験手法X-RAY DIFFRACTION (1.255 Å)
主引用文献Mechanistic Insights into Substrate Recognition of Human Nucleoside Diphosphate Kinase C Based on Nucleotide-Induced Structural Changes.
Int J Mol Sci, 25, 2024
2MA7
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BU of 2ma7 by Molmil
Solution NMR Structure of Zinc finger protein Eos from Homo sapiens, Northeast Structural Genomics Consortium (NESG) Target HR7992A
分子名称: ZINC ION, Zinc finger protein Eos
著者Pulavarti, S.V, Mills, J.L, Wang, D, Jigabm, E, Hamilton, K, Xiao, R, Everett, J.K, Acton, T.B, Montelione, G.T, Szyperski, T, Northeast Structural Genomics Consortium (NESG)
登録日2013-06-28
公開日2013-09-04
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Solution NMR Structure of Zinc finger protein Eos from Homo sapiens, Northeast Structural Genomics Consortium (NESG) Target HR7992A
To be Published
6HTS
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BU of 6hts by Molmil
Cryo-EM structure of the human INO80 complex bound to nucleosome
分子名称: ADENOSINE-5'-DIPHOSPHATE, Actin-related protein 5, Chromatin-remodeling ATPase INO80, ...
著者Ayala, R, Willhoft, O, Aramayo, R.J, Wilkinson, M, McCormack, E.A, Ocloo, L, Wigley, D.B, Zhang, X.
登録日2018-10-04
公開日2018-11-07
最終更新日2024-05-15
実験手法ELECTRON MICROSCOPY (4.8 Å)
主引用文献Structure and regulation of the human INO80-nucleosome complex.
Nature, 556, 2018
6IR9
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BU of 6ir9 by Molmil
RNA polymerase II elongation complex bound with Elf1 and Spt4/5, stalled at SHL(-1) of the nucleosome
分子名称: DNA (198-MER), DNA-directed RNA polymerase subunit, DNA-directed RNA polymerase subunit beta, ...
著者Ehara, H, Kujirai, T, Fujino, Y, Shirouzu, M, Kurumizaka, H, Sekine, S.
登録日2018-11-12
公開日2019-02-20
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (3.8 Å)
主引用文献Structural insight into nucleosome transcription by RNA polymerase II with elongation factors.
Science, 363, 2019
6J50
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BU of 6j50 by Molmil
RNA polymerase II elongation complex bound with Spt4/5 and foreign DNA, stalled at SHL(-1) of the nucleosome (tilted conformation)
分子名称: DNA (198-MER), DNA (41-MER), DNA-directed RNA polymerase subunit, ...
著者Ehara, H, Kujirai, T, Fujino, Y, Shirouzu, M, Kurumizaka, H, Sekine, S.
登録日2019-01-10
公開日2019-02-20
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (4.7 Å)
主引用文献Structural insight into nucleosome transcription by RNA polymerase II with elongation factors.
Science, 363, 2019
6J4W
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BU of 6j4w by Molmil
RNA polymerase II elongation complex bound with Elf1 and Spt4/5, stalled at SHL(-5) of the nucleosome
分子名称: DNA (198-MER), DNA-directed RNA polymerase subunit, DNA-directed RNA polymerase subunit beta, ...
著者Ehara, H, Kujirai, T, Fujino, Y, Shirouzu, M, Kurumizaka, H, Sekine, S.
登録日2019-01-10
公開日2019-02-20
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (7.9 Å)
主引用文献Structural insight into nucleosome transcription by RNA polymerase II with elongation factors.
Science, 363, 2019

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