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8BXV
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BU of 8bxv by Molmil
Crystal structure of Odorant Binding Protein 5 from Anopheles gambiae (AgamOBP5) with Thymol
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, 5-METHYL-2-(1-METHYLETHYL)PHENOL, DI(HYDROXYETHYL)ETHER, ...
著者Liggri, P.G.V, Tsitsanou, K.E, Zographos, S.E.
登録日2022-12-10
公開日2023-03-22
最終更新日2023-04-12
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献The structure of AgamOBP5 in complex with the natural insect repellents Carvacrol and Thymol: Crystallographic, fluorescence and thermodynamic binding studies.
Int.J.Biol.Macromol., 237, 2023
8BXW
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BU of 8bxw by Molmil
Crystal structure of Odorant Binding Protein 5 from Anopheles gambiae (AgamOBP5) with Carvacrol
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, 1-BUTANOL, 2-methyl-5-propan-2-yl-phenol, ...
著者Liggri, P.G.V, Tsitsanou, K.E, Zographos, S.E.
登録日2022-12-10
公開日2023-03-22
最終更新日2023-04-12
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献The structure of AgamOBP5 in complex with the natural insect repellents Carvacrol and Thymol: Crystallographic, fluorescence and thermodynamic binding studies.
Int.J.Biol.Macromol., 237, 2023
4OUE
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BU of 4oue by Molmil
Crystal structure of an a-L-Fucosidase GH29 from Bacteroides thetaiotaomicron (BT2192) in complex with IPTG
分子名称: 1-methylethyl 1-thio-beta-D-galactopyranoside, GLYCEROL, Putative lipoprotein
著者Lafite, P, Daniellou, R, Guillotin, L.
登録日2014-02-16
公開日2014-02-26
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Unraveling the Substrate Recognition Mechanism and Specificity of the Unusual Glycosyl Hydrolase Family 29 BT2192 from Bacteroides thetaiotaomicron.
Biochemistry, 53, 2014
8V3C
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BU of 8v3c by Molmil
AgamOR28 structure without ligand
分子名称: OR28, Odorant receptor Orco
著者Zhao, J, del Marmol, J.
登録日2023-11-27
公開日2024-06-19
最終更新日2024-07-10
実験手法ELECTRON MICROSCOPY (2.62 Å)
主引用文献Structural basis of odor sensing by insect heteromeric odorant receptors.
Science, 384, 2024
3D7H
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BU of 3d7h by Molmil
A high resolution crystal structure of human glutamate carboxypeptidase II (GCPII) in a complex with DCIBzL, a urea-based inhibitor
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
著者Lubkowski, J, Barinka, C.
登録日2008-05-21
公開日2008-12-30
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Interactions between Human Glutamate Carboxypeptidase II and Urea-Based Inhibitors: Structural Characterization
J.Med.Chem., 51, 2008
8V3D
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BU of 8v3d by Molmil
AgamOR28 structure bound to 2,4,5-trimethylthiazole
分子名称: 2,4,5-trimethyl-1,3-thiazole, OR28, Odorant receptor Orco
著者Zhao, J, del Marmol, J.
登録日2023-11-27
公開日2024-06-19
最終更新日2024-07-10
実験手法ELECTRON MICROSCOPY (2.95 Å)
主引用文献Structural basis of odor sensing by insect heteromeric odorant receptors.
Science, 384, 2024
3CTT
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BU of 3ctt by Molmil
Crystal complex of N-terminal Human Maltase-Glucoamylase with Casuarine
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, CASUARINE, GLYCEROL, ...
著者Sim, L, Rose, D.R.
登録日2008-04-14
公開日2009-02-24
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Total syntheses of casuarine and its 6-O-alpha-glucoside: complementary inhibition towards glycoside hydrolases of the GH31 and GH37 families
Chemistry, 15, 2009
3D7D
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BU of 3d7d by Molmil
A high resolution crystal structure of human glutamate carboxypeptidase II (GCPII) in a complex with DCFBD, a urea-based inhibitor
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
著者Lubkowski, J, Barinka, C.
登録日2008-05-21
公開日2008-12-30
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.69 Å)
主引用文献Interactions between Human Glutamate Carboxypeptidase II and Urea-Based Inhibitors: Structural Characterization
J.Med.Chem., 51, 2008
6KKI
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BU of 6kki by Molmil
Crystal structure of Drug:Proton Antiporter-1 (DHA1) Family SotB, in the inward-occluded conformation
分子名称: 1-methylethyl 1-thio-beta-D-galactopyranoside, Sugar efflux transporter, nonyl beta-D-glucopyranoside
著者Xiao, Q.J, Deng, D.
登録日2019-07-25
公開日2020-07-29
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (3.064 Å)
主引用文献Visualizing the nonlinear changes of a drug-proton antiporter from inward-open to occluded state.
Biochem.Biophys.Res.Commun., 534, 2021
7DXH
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BU of 7dxh by Molmil
Cryo-EM structure of PSII intermediate Psb28-PSII complex
分子名称: (1S)-2-(ALPHA-L-ALLOPYRANOSYLOXY)-1-[(TRIDECANOYLOXY)METHYL]ETHYL PALMITATE, 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL, 5-[(2E,6E,10E,14E,18E,22E)-3,7,11,15,19,23,27-HEPTAMETHYLOCTACOSA-2,6,10,14,18,22,26-HEPTAENYL]-2,3-DIMETHYLBENZO-1,4-QUINONE, ...
著者Sui, S.F, Shen, J.R, Han, G.Y, Xiao, Y.N, Huang, G.Q.
登録日2021-01-18
公開日2021-06-30
最終更新日2024-06-05
実験手法ELECTRON MICROSCOPY (3.14 Å)
主引用文献Structural insights into cyanobacterial photosystem II intermediates associated with Psb28 and Tsl0063.
Nat.Plants, 7, 2021
7DXA
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BU of 7dxa by Molmil
PSII intermediate Psb28-RC47
分子名称: (1S)-2-(ALPHA-L-ALLOPYRANOSYLOXY)-1-[(TRIDECANOYLOXY)METHYL]ETHYL PALMITATE, 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL, 5-[(2E,6E,10E,14E,18E,22E)-3,7,11,15,19,23,27-HEPTAMETHYLOCTACOSA-2,6,10,14,18,22,26-HEPTAENYL]-2,3-DIMETHYLBENZO-1,4-QUINONE, ...
著者Sui, S.F, Shen, J.R, Han, G.Y, Xiao, Y.N, Huang, G.Q.
登録日2021-01-18
公開日2021-06-30
最終更新日2024-06-05
実験手法ELECTRON MICROSCOPY (3.14 Å)
主引用文献Structural insights into cyanobacterial photosystem II intermediates associated with Psb28 and Tsl0063.
Nat.Plants, 7, 2021
3LPO
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BU of 3lpo by Molmil
Crystal structure of the N-terminal domain of sucrase-isomaltase
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Sucrase-isomaltase, ...
著者Sim, L, Rose, D.R.
登録日2010-02-05
公開日2010-03-31
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Structural basis for substrate selectivity in human maltase-glucoamylase and sucrase-isomaltase N-terminal domains.
J.Biol.Chem., 285, 2010
3LTF
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BU of 3ltf by Molmil
Crystal Structure of the Drosophila Epidermal Growth Factor Receptor ectodomain in complex with Spitz
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Epidermal growth factor receptor, ...
著者Alvarado, D, Klein, D.E, Lemmon, M.A.
登録日2010-02-15
公開日2010-08-25
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Structural basis for negative cooperativity in growth factor binding to an EGF receptor.
Cell(Cambridge,Mass.), 142, 2010
3MJ9
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BU of 3mj9 by Molmil
Crystal structure of JAML in complex with the stimulatory antibody HL4E10
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Junctional adhesion molecule-like, STIMULATORY HAMSTER ANTIBODY HL4E10 FAB HEAVY CHAIN, ...
著者Verdino, P, Wilson, I.A.
登録日2010-04-12
公開日2011-02-23
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (2.95 Å)
主引用文献Molecular insights into gamma delta T cell costimulation by an anti-JAML antibody.
Structure, 19, 2011
3MPH
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BU of 3mph by Molmil
The structure of human diamine oxidase complexed with an inhibitor aminoguanidine
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Amiloride-sensitive amine oxidase, CALCIUM ION, ...
著者McGrath, A.P, Guss, J.M.
登録日2010-04-27
公開日2010-09-08
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Correlation of active site metal content in human diamine oxidase with trihydroxyphenylalanine quinone cofactor biogenesis
Biochemistry, 49, 2010
4FTB
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BU of 4ftb by Molmil
Crystal structure of the authentic Flock House virus particle
分子名称: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, CALCIUM ION, CHLORIDE ION, ...
著者Speir, J.A, Chen, Z, Reddy, V.S, Johnson, J.E.
登録日2012-06-27
公開日2012-08-01
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Structural study of virus assembly intermediates reveals maturation event sequence and a staging position for externalized lytic peptides
to be published, 2012
6V95
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BU of 6v95 by Molmil
Peanut lectin complexed with divalent N-beta-D-galactopyranosyl-L-tartaramidoyl derivative (diNGT)
分子名称: (2R,3R)-N-[(1-{(3S,3aR,6S,6aR)-6-[4-({[(2R,3R)-2,3-dihydroxy-4-oxo-4-{[(2R,3R,4R,5R,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)tetrahydro-2H-pyran-2-yl]amino}butanoyl]amino}methyl)-1H-1,2,3-triazol-1-yl]hexahydrofuro[3,2-b]furan-3-yl}-1H-1,2,3-triazol-4-yl)methyl]-2,3-dihydroxy-N'-[(2R,3R,4S,5R,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)tetrahydro-2H-pyran-2-yl]butanediamide (non-preferred name), CALCIUM ION, Galactose-binding lectin, ...
著者Otero, L.H, Primo, E.D, Cagnoni, A.J, Klinke, S, Goldbaum, F.A, Uhrig, M.L.
登録日2019-12-13
公開日2020-10-28
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.78 Å)
主引用文献Crystal structures of peanut lectin in the presence of synthetic beta-N- and beta-S-galactosides disclose evidence for the recognition of different glycomimetic ligands.
Acta Crystallogr D Struct Biol, 76, 2020
4WC4
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BU of 4wc4 by Molmil
tRNA-processing enzyme complex 2
分子名称: ADENOSINE-5'-TRIPHOSPHATE, Poly A polymerase, RNA (74-MER)
著者Yamashita, S, Tomita, K.
登録日2014-09-04
公開日2015-04-15
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (3.501 Å)
主引用文献Measurement of Acceptor-T Psi C Helix Length of tRNA for Terminal A76-Addition by A-Adding Enzyme.
Structure, 23, 2015
4FXC
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BU of 4fxc by Molmil
TERTIARY STRUCTURE OF [2FE-2S] FERREDOXIN FROM SPIRULINA PLATENSIS REFINED AT 2.5 ANGSTROMS RESOLUTION: STRUCTURAL COMPARISONS OF PLANT-TYPE FERREDOXINS AND AN ELECTROSTATIC POTENTIAL ANALYSIS
分子名称: FE2/S2 (INORGANIC) CLUSTER, FERREDOXIN
著者Fukuyama, K, Tsukihara, T.
登録日1995-04-25
公開日1995-12-07
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Tertiary structure of [2Fe-2S] ferredoxin from Spirulina platensis refined at 2.5 A resolution: structural comparisons of plant-type ferredoxins and an electrostatic potential analysis.
J.Biochem.(Tokyo), 117, 1995
3MBE
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BU of 3mbe by Molmil
TCR 21.30 in complex with MHC class II I-Ag7HEL(11-27)
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, MHC CLASS II H2-IAg7 ALPHA CHAIN, ...
著者Corper, A.L, Yoshida, K, Teyton, L, Wilson, I.A.
登録日2010-03-25
公開日2010-05-12
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.886 Å)
主引用文献The diabetogenic mouse MHC class II molecule I-Ag7 is endowed with a switch that modulates TCR affinity.
J.Clin.Invest., 120, 2010
4WC5
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BU of 4wc5 by Molmil
Structure of tRNA-processing enzyme complex 3
分子名称: CYTIDINE-5'-TRIPHOSPHATE, Poly A polymerase, RNA (74-MER)
著者Yamashita, S, Tomita, K.
登録日2014-09-04
公開日2015-04-15
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (3.41 Å)
主引用文献Measurement of Acceptor-T Psi C Helix Length of tRNA for Terminal A76-Addition by A-Adding Enzyme.
Structure, 23, 2015
3MJ6
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BU of 3mj6 by Molmil
Crystal structure of the gammadelta T cell costimulatory receptor Junctional Adhesion Molecule-Like Protein, JAML
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, FORMIC ACID, Junctional adhesion molecule-like, ...
著者Verdino, P, Wilson, I.A.
登録日2010-04-12
公開日2010-09-22
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.19 Å)
主引用文献The molecular interaction of CAR and JAML recruits the central cell signal transducer PI3K.
Science, 329, 2010
2HED
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BU of 2hed by Molmil
CONTRIBUTION OF WATER MOLECULES IN THE INTERIOR OF A PROTEIN TO THE CONFORMATIONAL STABILITY
分子名称: LYSOZYME, SODIUM ION
著者Takano, K, Funahashi, J, Yamagata, Y, Fujii, S, Yutani, K.
登録日1997-09-16
公開日1998-01-14
最終更新日2021-11-03
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Contribution of water molecules in the interior of a protein to the conformational stability.
J.Mol.Biol., 274, 1997
4V98
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BU of 4v98 by Molmil
The 8S snRNP Assembly Intermediate
分子名称: CG10419, Icln, LD23602p, ...
著者Grimm, C, Pelz, J.P, Schindelin, H, Diederichs, K, Kuper, J, Kisker, C.
登録日2012-05-15
公開日2014-07-09
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Structural Basis of Assembly Chaperone- Mediated snRNP Formation.
Mol.Cell, 49, 2013
6VAW
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BU of 6vaw by Molmil
Peanut lectin complexed with N-beta-D-galactopyranosyl-L-succinamoyl derivative (NGS)
分子名称: CALCIUM ION, Galactose-binding lectin, MANGANESE (II) ION, ...
著者Otero, L.H, Primo, E.D, Cagnoni, A.J, Klinke, S, Goldbaum, F.A, Uhrig, M.L.
登録日2019-12-18
公開日2020-10-28
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Crystal structures of peanut lectin in the presence of synthetic beta-N- and beta-S-galactosides disclose evidence for the recognition of different glycomimetic ligands.
Acta Crystallogr D Struct Biol, 76, 2020

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