Loading
PDBj
メニューPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

2ATO
DownloadVisualize
BU of 2ato by Molmil
Crystal structure of Human Cathepsin K in complex with myocrisin
分子名称: (S)-(1,2-DICARBOXYETHYLTHIO)GOLD, Cathepsin K, SULFATE ION
著者Weidauer, E, Yasuda, Y, Biswal, B.K, Kerr, L.D, Cherney, M.M, Gordon, R.E, James, M.N.G, Bromme, D.
登録日2005-08-25
公開日2006-08-29
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Effects of disease-modifying anti-rheumatic drugs (DMARDs) on the activities of rheumatoid arthritis-associated cathepsins K and S.
Biol.Chem., 388, 2007
7I6O
DownloadVisualize
BU of 7i6o by Molmil
Group deposition of Coxsackievirus A16 (G-10) 2A protease in complex with inhibitors from the ASAP AViDD centre -- Crystal structure of Coxsackievirus A16 (G-10) 2A protease in complex with ASAP-0037765-001 (A71EV2A-x4994)
分子名称: 1-[(1-methyl-1H-indazol-3-yl)acetyl]azetidine-3-carboxamide, DIMETHYL SULFOXIDE, Protease 2A, ...
著者Lithgo, R.M, Fairhead, M, Koekemoer, L, Balcomb, B.H, Capkin, E, Chandran, A.V, Golding, M, Godoy, A.S, Aschenbrenner, J.C, Marples, P.G, Ni, X, Thompson, W, Tomlinson, C.W.E, Wild, C, Winokan, M, Xavier, M.-A.E, Kenton, N, Tucker, J, DiPoto, M, Lee, A, Fearon, D, von Delft, F.
登録日2025-03-12
公開日2025-04-02
最終更新日2025-04-09
実験手法X-RAY DIFFRACTION (1.39 Å)
主引用文献Group deposition of Coxsackievirus A16 (G-10) 2A protease in complex with inhibitors from the ASAP AViDD centre
To Be Published
4NRN
DownloadVisualize
BU of 4nrn by Molmil
Crystal structure of metal-bound toxin from Helicobacter pylori
分子名称: ZINC ION, metal-bound toxin
著者Lee, B.J, Im, H, Pathak, C, Jang, S.B.
登録日2013-11-27
公開日2014-10-15
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.802 Å)
主引用文献Crystal structure of toxin HP0892 from Helicobacter pylori with two Zn(II) at 1.8 angstrom resolution
Protein Sci., 23, 2014
3KMH
DownloadVisualize
BU of 3kmh by Molmil
Crystal Structure of a Novel Sugar Isomerase from E. coli O157:H7
分子名称: ACETATE ION, D-lyxose isomerase, GLYCEROL, ...
著者van Staalduinen, L.M, Jia, Z, Montreal-Kingston Bacterial Structural Genomics Initiative (BSGI)
登録日2009-11-10
公開日2010-07-21
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (1.58 Å)
主引用文献Structure-based annotation of a novel sugar isomerase from the pathogenic E. coli O157:H7.
J.Mol.Biol., 401, 2010
6TID
DownloadVisualize
BU of 6tid by Molmil
Structure of the N terminal domain of Bc2L-C lectin (1-131) in complex with H-type 1 antigen
分子名称: Lectin, alpha-L-fucopyranose-(1-2)-beta-D-galactopyranose-(1-3)-2-acetamido-2-deoxy-beta-D-glucopyranose
著者Varrot, A, Bermeo, R.
登録日2019-11-22
公開日2020-01-22
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.614 Å)
主引用文献BC2L-C N-Terminal Lectin Domain Complexed with Histo Blood Group Oligosaccharides Provides New Structural Information.
Molecules, 25, 2020
3B6O
DownloadVisualize
BU of 3b6o by Molmil
Structure of TREX1 in complex with a nucleotide and an inhibitor ion (lithium)
分子名称: LITHIUM ION, THYMIDINE-5'-PHOSPHATE, Three prime repair exonuclease 1
著者Brucet, M, Querol-Audi, J, Fita, I, Celada, A.
登録日2007-10-29
公開日2008-09-23
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structural and biochemical studies of TREX1 inhibition by metals. Identification of a new active histidine conserved in DEDDh exonucleases.
Protein Sci., 17, 2008
7IAB
DownloadVisualize
BU of 7iab by Molmil
Group deposition of ZIKV NS2B-NS3 protease in complex with inhibitors from ASAP Discovery Consortium -- Crystal Structure of ZIKV NS2B-NS3 protease in complex with ASAP-0029928-001
分子名称: (2P)-5-chloro-N-(2,3-dihydro-1H-isoindol-5-yl)-2-(1H-1,2,4-triazol-1-yl)benzamide, DIMETHYL SULFOXIDE, Serine protease NS3, ...
著者Ni, X, Marples, P.G, Godoy, A.S, Koekemoer, L, Aschenbrenner, J.C, Balcomb, B.H, Fairhead, M, Lithgo, R.M, Lee, A, Kenton, N, Thompson, W, Tomlinson, C.W.E, Wild, C, Winokan, M, Williams, E.P, Chandran, A.V, Walsh, M.A, Fearon, D, von Delft, F.
登録日2025-04-10
公開日2025-04-23
実験手法X-RAY DIFFRACTION (2.152 Å)
主引用文献Group deposition of ZIKV NS2B-NS3 protease in complex with inhibitors from ASAP Discovery Consortium
To Be Published
5BZI
DownloadVisualize
BU of 5bzi by Molmil
Crystal structure of the murine cd44 hyaluronan binding domain complex with a small molecule
分子名称: 1,2,3,4-tetrahydroisoquinolin-8-amine, CD44 antigen, DIMETHYL SULFOXIDE, ...
著者Liu, L.K, Finzel, B.C.
登録日2015-06-11
公開日2016-06-29
最終更新日2024-11-13
実験手法X-RAY DIFFRACTION (1.32 Å)
主引用文献Crystal structure of the murine cd44 hyaluronan binding domain complex with a small molecule
To Be Published
2AXC
DownloadVisualize
BU of 2axc by Molmil
Crystal structure of ColE7 translocation domain
分子名称: Colicin E7, GLYCEROL, SULFATE ION
著者Cheng, Y.S, Shi, Z, Doudeva, L.G, Yang, W.Z, Chak, K.F, Yuan, H.S.
登録日2005-09-04
公開日2006-03-14
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献High-resolution crystal structure of a truncated ColE7 translocation domain: implications for colicin transport across membranes
J.Mol.Biol., 356, 2006
9D0Z
DownloadVisualize
BU of 9d0z by Molmil
X-ray crystal structure of H157Q variant Thermothelomyces thermophilus polysaccharide monooxygenase 9E
分子名称: 1,2-ETHANEDIOL, COPPER (II) ION, Glycoside hydrolase family 61 protein, ...
著者Thomas, W.C, Batka, A.E, Marletta, M.A.
登録日2024-08-07
公開日2024-12-04
最終更新日2024-12-18
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Second-Sphere Histidine Catalytic Function in a Fungal Polysaccharide Monooxygenase.
Biochemistry, 63, 2024
2FEF
DownloadVisualize
BU of 2fef by Molmil
The Crystal Structure of Protein PA2201 from Pseudomonas aeruginosa
分子名称: 1,2-ETHANEDIOL, hypothetical protein PA2201
著者Cymborowski, M.T, Chruszcz, M, Wang, S, Shumilin, I, Kudritska, M, Evdokimova, E, Savchenko, A, Edwards, A.M, Joachimiak, A, Minor, W, Midwest Center for Structural Genomics (MCSG)
登録日2005-12-15
公開日2006-01-31
最終更新日2024-11-06
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献The Crystal Structure of Protein PA2201 from Pseudomonas aeruginosa
To be Published
7I9N
DownloadVisualize
BU of 7i9n by Molmil
Group deposition of ZIKV NS2B-NS3 protease in complex with inhibitors from ASAP Discovery Consortium -- Crystal Structure of ZIKV NS2B-NS3 protease in complex with ASAP-0022474-001
分子名称: (4S)-N-[3-(aminomethyl)phenyl]-2-[(pyrrolidin-1-yl)methyl]imidazo[1,2-a]pyridine-8-carboxamide, DIMETHYL SULFOXIDE, Serine protease NS3, ...
著者Ni, X, Marples, P.G, Godoy, A.S, Koekemoer, L, Aschenbrenner, J.C, Balcomb, B.H, Fairhead, M, Lithgo, R.M, Lee, A, Kenton, N, Thompson, W, Tomlinson, C.W.E, Wild, C, Winokan, M, Williams, E.P, Chandran, A.V, Walsh, M.A, Fearon, D, von Delft, F.
登録日2025-04-10
公開日2025-04-23
実験手法X-RAY DIFFRACTION (1.721 Å)
主引用文献Group deposition of ZIKV NS2B-NS3 protease in complex with inhibitors from ASAP Discovery Consortium
To Be Published
5C1Y
DownloadVisualize
BU of 5c1y by Molmil
Crystal structure of EV71 3C Proteinase in complex with Compound 1
分子名称: 3C proteinase, propan-2-yl N-[(2S)-1-oxidanylidene-1-[[(2S)-1-oxidanyl-3-[(3S)-2-oxidanylidenepyrrolidin-3-yl]propan-2-yl]amino]-3-phenyl-propan-2-yl]carbamate
著者Zhang, L, Huang, G, Cai, Q, Zhao, C, Ren, H, Li, P, Li, N, Chen, S, Li, J, Lin, T.
登録日2015-06-15
公開日2016-06-01
最終更新日2024-11-06
実験手法X-RAY DIFFRACTION (1.97 Å)
主引用文献Optimize the interactions at S4 with efficient inhibitors targeting 3C proteinase from enterovirus 71
J.Mol.Recognit., 29, 2016
4NU1
DownloadVisualize
BU of 4nu1 by Molmil
Crystal structure of a transition state mimic of the GSK-3/Axin complex bound to phosphorylated N-terminal auto-inhibitory pS9 peptide
分子名称: ADENOSINE-5'-DIPHOSPHATE, ALUMINUM FLUORIDE, Axin-1, ...
著者Chu, M.L.-H, Stamos, J.L, Enos, M.D, Shah, N, Weis, W.I.
登録日2013-12-03
公開日2014-03-26
最終更新日2024-11-06
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structural basis of GSK-3 inhibition by N-terminal phosphorylation and by the Wnt receptor LRP6.
Elife, 3, 2014
8VCX
DownloadVisualize
BU of 8vcx by Molmil
Human TCR A2.13 in complex with DQ8-InsCpep
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, GLYCEROL, ...
著者Tran, T.M, Lim, J.J, Loh, T.J, Mannering, I.S, Rossjohn, J, Reid, H.H.
登録日2023-12-14
公開日2024-08-07
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (2.59 Å)
主引用文献A structural basis of T cell cross-reactivity to native and spliced self-antigens presented by HLA-DQ8.
J.Biol.Chem., 300, 2024
3T90
DownloadVisualize
BU of 3t90 by Molmil
Crystal structure of glucosamine-6-phosphate N-acetyltransferase from Arabidopsis thaliana
分子名称: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, Glucose-6-phosphate acetyltransferase 1, SODIUM ION
著者Grishkovskaya, I, Herter, T, Riegler, H, Usadel, B.
登録日2011-08-02
公開日2012-04-11
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Crystal structure and functional characterization of a glucosamine-6-phosphate N-acetyltransferase from Arabidopsis thaliana.
Biochem.J., 443, 2012
1NQD
DownloadVisualize
BU of 1nqd by Molmil
CRYSTAL STRUCTURE OF CLOSTRIDIUM HISTOLYTICUM COLG COLLAGENASE COLLAGEN-BINDING DOMAIN 3B AT 1.65 ANGSTROM RESOLUTION IN PRESENCE OF CALCIUM
分子名称: CALCIUM ION, class 1 collagenase
著者Wilson, J.J, Matsushita, O, Okabe, A, Sakon, J.
登録日2003-01-21
公開日2003-04-15
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献A Bacterial Collagen-Binding Domain with Novel Calcium-Binding Motif Controls Domain Orientation
Embo J., 22, 2003
3GCQ
DownloadVisualize
BU of 3gcq by Molmil
Human P38 MAP kinase in complex with RL45
分子名称: 1-{4-[(6-aminoquinazolin-4-yl)amino]phenyl}-3-[3-tert-butyl-1-(3-methylphenyl)-1H-pyrazol-5-yl]urea, Mitogen-activated protein kinase 14, octyl beta-D-glucopyranoside
著者Gruetter, C, Simard, J.R, Getlik, M, Rauh, D.
登録日2009-02-22
公開日2009-06-09
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Development of a fluorescent-tagged kinase assay system for the detection and characterization of allosteric kinase inhibitors.
J.Am.Chem.Soc., 131, 2009
7XTP
DownloadVisualize
BU of 7xtp by Molmil
eIF4E in Complex with a Disulphide-Free Autonomous VH Domain
分子名称: Eukaryotic translation initiation factor 4E, VH-S4ss, [[(2R,3S,4R,5R)-5-(6-AMINO-3-METHYL-4-OXO-5H-IMIDAZO[4,5-C]PYRIDIN-1-YL)-3,4-DIHYDROXY-OXOLAN-2-YL]METHOXY-HYDROXY-PHOSPHORYL] PHOSPHONO HYDROGEN PHOSPHATE
著者Brown, C.J, Frosi, Y, Jiang, S, Lin, Y.C.
登録日2022-05-17
公開日2022-07-27
最終更新日2024-11-13
実験手法X-RAY DIFFRACTION (1.828 Å)
主引用文献Engineering an autonomous VH domain to modulate intracellular pathways and to interrogate the eIF4F complex.
Nat Commun, 13, 2022
3G8V
DownloadVisualize
BU of 3g8v by Molmil
The rationally designed catalytically inactive mutant Mth0212(D151N)
分子名称: Exodeoxyribonuclease, GLYCEROL, TETRAETHYLENE GLYCOL
著者Lakomek, K, Dickmanns, A, Ficner, R.
登録日2009-02-12
公開日2010-03-09
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Crystal Structure Analysis of DNA Uridine Endonuclease Mth212 Bound to DNA
J.Mol.Biol., 399, 2010
2AXE
DownloadVisualize
BU of 2axe by Molmil
IODINATED COMPLEX OF ACETYL XYLAN ESTERASE AT 1.80 ANGSTROMS
分子名称: ACETYL XYLAN ESTERASE, SULFATE ION
著者Ghosh, D, Erman, M, Sawicki, M.W, Lala, P, Weeks, D.R, Li, N, Pangborn, W, Thiel, D.J, Jornvall, H, Eyzaguirre, J.
登録日1998-09-01
公開日1999-05-18
最終更新日2024-11-20
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Determination of a protein structure by iodination: the structure of iodinated acetylxylan esterase.
Acta Crystallogr.,Sect.D, 55, 1999
3G9I
DownloadVisualize
BU of 3g9i by Molmil
GR DNA Binding domain: Pal complex-35
分子名称: 1,2-ETHANEDIOL, DNA (5'-D(*AP*AP*GP*AP*AP*CP*AP*TP*TP*TP*TP*GP*TP*TP*CP*T)-3'), DNA (5'-D(*TP*AP*GP*AP*AP*CP*AP*AP*AP*AP*TP*GP*TP*TP*CP*T)-3'), ...
著者Pufall, M.A, Yamamoto, K.R, Meijsing, S.H.
登録日2009-02-13
公開日2009-04-21
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献DNA binding site sequence directs glucocorticoid receptor structure and activity.
Science, 324, 2009
2B4Y
DownloadVisualize
BU of 2b4y by Molmil
Crystal Structure of Human Sirtuin homolog 5
分子名称: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ADENOSINE-5-DIPHOSPHORIBOSE, NAD-dependent deacetylase sirtuin-5, ...
著者Min, J.R, Antoshenko, T, Dong, A, Schuetz, A, Loppnau, P, Weigelt, J, Sundstrom, M, Arrowsmith, C.H, Edwards, A.M, Bochkarev, A, Plotnikov, A.N, Structural Genomics Consortium (SGC)
登録日2005-09-27
公開日2006-02-28
最終更新日2024-11-06
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal Structure of Human Sirtuin homolog 5 in complex with NAD
To be Published
4QW2
DownloadVisualize
BU of 4qw2 by Molmil
FMRP N-terminal domain (R138Q)
分子名称: 1,2-ETHANEDIOL, Fragile X mental retardation protein 1, LEAD (II) ION
著者Myrick, L.K, Hashimoto, H, Cheng, X, Warren, S.T.
登録日2014-07-16
公開日2014-12-03
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.989 Å)
主引用文献Human FMRP contains an integral tandem Agenet (Tudor) and KH motif in the amino terminal domain.
Hum.Mol.Genet., 24, 2015
5C79
DownloadVisualize
BU of 5c79 by Molmil
PH domain of ASAP1 in complex with diC4-PtdIns(4,5)P2
分子名称: (2R)-3-{[(R)-HYDROXY{[(1R,2R,3S,4R,5R,6S)-2,3,6-TRIHYDROXY-4,5-BIS(PHOSPHONOOXY)CYCLOHEXYL]OXY}PHOSPHORYL]OXY}PROPANE-1 ,2-DIYL DIBUTANOATE, Arf-GAP, CHLORIDE ION
著者Xia, D, Tang, W.K.
登録日2015-06-24
公開日2015-10-07
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Molecular Basis for Cooperative Binding of Anionic Phospholipids to the PH Domain of the Arf GAP ASAP1.
Structure, 23, 2015

245663

件を2025-12-03に公開中

PDB statisticsPDBj update infoContact PDBjnumon