PDB: 37819 件ウェブページステータス検索Chemie searchBIRD

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6AGY	Aspergillus fumigatus Af293 NDK 分子名称: Nucleoside diphosphate kinase 著者 Hu, Y, Han, L. 登録日 2018-08-15 公開日 2019-03-13 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Characterization of crystal structure and key residues of Aspergillus fumigatus nucleoside diphosphate kinase. Biochem. Biophys. Res. Commun., 511, 2019
4F36	Crystal structure of Nucleoside diphosphate kinase B from Trypanosoma brucei, apo form 分子名称: Nucleoside diphosphate kinase, THIOCYANATE ION 著者 Seattle Structural Genomics Center for Infectious Disease (SSGCID) 登録日 2012-05-08 公開日 2012-05-16 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Crystal structure of Nucleoside diphosphate kinase B from Trypanosoma brucei, apo form To be Published
1XIQ	Plasmodium falciparum Nucleoside diphosphate kinase B 分子名称: Nucleoside diphosphate kinase B 著者 Robien, M.A, Bosch, J, Hol, W.G.J, Structural Genomics of Pathogenic Protozoa Consortium (SGPP) 登録日 2004-09-21 公開日 2004-10-12 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (3.05 Å) 主引用文献 Crystal structure of Nucleoside diphosphate kinase B from Plasmodium falciparum To be Published
1WKJ	Crystal Structure of Nucleoside Diphosphate Kinase from Thermus thermophilus HB8 分子名称: nucleoside diphosphate kinase 著者 Takeishi, S, Nakagawa, N, Masui, R, Kuramitsu, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) 登録日 2004-05-31 公開日 2005-08-23 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Crystal Structure of Nucleoside Diphosphate Kinase from Thermus thermophilus HB8 To be Published
4XZQ	Nucleosome disassembly by RSC and SWI/SNF is enhanced by H3 acetylation near the nucleosome dyad axis 分子名称: DNA (147-MER), Histone H2A, Histone H2B 1.1, ... 著者 Dechassa, M.L, Luger, K, Chatterjee, N, North, J.A, Manohar, M, Prasad, R, Ottessen, J.J, Poirier, M.G, Bartholomew, B. 登録日 2015-02-04 公開日 2015-10-14 最終更新日 2024-11-06 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 Histone Acetylation near the Nucleosome Dyad Axis Enhances Nucleosome Disassembly by RSC and SWI/SNF. Mol.Cell.Biol., 35, 2015
4Z66	Nucleosome disassembly by RSC and SWI/SNF is enhanced by H3 acetylation near the nucleosome dyad axis 分子名称: DNA (147-MER), Histone H2A, Histone H2B 1.1, ... 著者 Dechassa, M.L, Luger, K, Chatterjee, N, North, J.A, Manohar, M, Prasad, R, Ottessen, J.J, Poirier, M.G, Bartholomew, B. 登録日 2015-04-03 公開日 2015-10-14 最終更新日 2024-10-23 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Histone Acetylation near the Nucleosome Dyad Axis Enhances Nucleosome Disassembly by RSC and SWI/SNF. Mol.Cell.Biol., 35, 2015
4YS3	Nucleosome disassembly by RSC and SWI/SNF is enhanced by H3 acetylation near the nucleosome dyad axis 分子名称: DNA (147-MER), Histone H2A, Histone H2B 1.1, ... 著者 Dechassa, M.L, Luger, K, Chatterjee, N, North, J.A, Manohar, M, Prasad, R, Ottessen, J.J, Poirier, M.G, Bartholomew, B. 登録日 2015-03-16 公開日 2015-10-14 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (3 Å) 主引用文献 Histone Acetylation near the Nucleosome Dyad Axis Enhances Nucleosome Disassembly by RSC and SWI/SNF. Mol.Cell.Biol., 35, 2015
5GSE	Crystal structure of unusual nucleosome 分子名称: DNA (250-MER), Histone H2A type 1-B/E, Histone H2B type 1-J, ... 著者 Kato, D, Osakabe, A, Arimura, Y, Park, S.Y, Kurumizaka, H. 登録日 2016-08-16 公開日 2017-05-03 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (3.14 Å) 主引用文献 Crystal structure of the overlapping dinucleosome composed of hexasome and octasome Science, 356, 2017
3LEL	Structural Insight into the Sequence-Dependence of Nucleosome Positioning 分子名称: 147-MER DNA, Histone H2A, Histone H2B 1.1, ... 著者 Wu, B, Vasudevan, D, Davey, C.A. 登録日 2010-01-15 公開日 2010-05-19 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (2.95 Å) 主引用文献 Structural insight into the sequence dependence of nucleosome positioning Structure, 18, 2010
3LZ0	Crystal Structure of Nucleosome Core Particle Composed of the Widom 601 DNA Sequence (orientation 1) 分子名称: CHLORIDE ION, DNA (145-MER), Histone H2A, ... 著者 Vasudevan, D, Chua, E.Y.D, Davey, C.A. 登録日 2010-03-01 公開日 2010-09-15 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Crystal structures of nucleosome core particles containing the '601' strong positioning sequence J.Mol.Biol., 403, 2010
3LZ1	Crystal Structure of Nucleosome Core Particle Composed of the Widom 601 DNA Sequence (orientation 2) 分子名称: CHLORIDE ION, DNA (145-MER), Histone H2A, ... 著者 Vasudevan, D, Chua, E.Y.D, Davey, C.A. 登録日 2010-03-01 公開日 2010-09-15 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Crystal structures of nucleosome core particles containing the '601' strong positioning sequence J.Mol.Biol., 403, 2010
7K7G	nucleosome and Gal4 complex 分子名称: Centromere DNA-binding protein complex CBF3 subunit B, DNA (147-MER), Histone H2A.1, ... 著者 Ruifang, G, Yawen, B. 登録日 2020-09-22 公開日 2021-03-31 実験手法 ELECTRON MICROSCOPY (4.2 Å) 主引用文献 Structural and dynamic mechanisms of CBF3-guided centromeric nucleosome formation. Nat Commun, 12, 2021
1OFC	nucleosome recognition module of ISWI ATPase 分子名称: 4-deoxy-alpha-D-glucopyranose, GLYCEROL, ISWI PROTEIN, ... 著者 Grune, T, Muller, C.W. 登録日 2003-04-10 公開日 2003-09-05 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Crystal Structure and Functional Analysis of a Nucleosome Recognition Module of the Remodeling Factor Iswi Mol.Cell, 12, 2003
4ZB4	Spliceosome component 分子名称: Pre-mRNA-processing factor 19 著者 Rocha de Moura, T, Pena, P. 登録日 2015-04-14 公開日 2016-09-14 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Spliceosome component To Be Published
3JS9	Crystal structure of nucleoside diphosphate kinase family protein from Babesia bovis 分子名称: Nucleoside diphosphate kinase family protein, SULFATE ION 著者 Seattle Structural Genomics Center for Infectious Disease (SSGCID) 登録日 2009-09-09 公開日 2009-09-22 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Crystal structure of nucleoside diphosphate kinase family protein from Babesia bovis To be Published
8GHZ	Cryo-EM structure of fish immunogloblin M-Fc 分子名称: Teleost immunoglobulin M protein, beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose 著者 Lyu, M, Stadtmueller, B.M, Malyutin, A.G. 登録日 2023-03-13 公開日 2023-11-08 最終更新日 2024-03-27 実験手法 ELECTRON MICROSCOPY (2.78 Å) 主引用文献 The structure of the teleost Immunoglobulin M core provides insights on polymeric antibody evolution, assembly, and function. Nat Commun, 14, 2023
1JXV	Crystal Structure of Human Nucleoside Diphosphate Kinase A 分子名称: Nucleoside Diphosphate Kinase A 著者 Min, K, Song, H.K, Chang, C, Kim, S.Y, Lee, K.J, Suh, S.W. 登録日 2001-09-10 公開日 2002-04-10 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Crystal structure of human nucleoside diphosphate kinase A, a metastasis suppressor. Proteins, 46, 2002
6JOH	The crystal of nucleoside diphosphate kinase from Aspergillus flavus 分子名称: Nucleoside diphosphate kinase 著者 Wang, Y, Wang, S, Wang, S.H. 登録日 2019-03-21 公開日 2020-01-29 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 Molecular and structural basis of Nucleoside Diphosphate Kinase regulating the spores and sclerotia development in Aspergillus flavus To Be Published
7ABH	Human pre-Bact-2 spliceosome (SF3b/U2 snRNP portion) 分子名称: Cell division cycle 5-like protein, DNA/RNA-binding protein KIN17, MINX M3 pre-mRNA, ... 著者 Townsend, C, Kastner, B, Leelaram, M.N, Bertram, K, Stark, H, Luehrmann, R. 登録日 2020-09-07 公開日 2020-12-09 最終更新日 2024-05-01 実験手法 ELECTRON MICROSCOPY (4.5 Å) 主引用文献 Mechanism of protein-guided folding of the active site U2/U6 RNA during spliceosome activation. Science, 370, 2020
3O62	Nucleosome core particle modified with a cisplatin 1,3-cis-{Pt(NH3)2}2+-d(GpTpG) intrastrand cross-link 分子名称: Cisplatin, DNA (146-MER), Histone H2A type 1, ... 著者 Lippard, S.J, Todd, R.C. 登録日 2010-07-28 公開日 2011-01-05 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (3.216 Å) 主引用文献 Consequences of Cisplatin binding on nucleosome structure and dynamics. Chem.Biol., 17, 2010
2BZZ	Crystal Structures of Eosinophil-derived Neurotoxin in Complex with the Inhibitors 5'-ATP, Ap3A, Ap4A and Ap5A 分子名称: ACETIC ACID, BIS(ADENOSINE)-5'-PENTAPHOSPHATE, NONSECRETORY RIBONUCLEASE 著者 Baker, M.D, Holloway, D.E, Swaminathan, G.J, Acharya, K.R. 登録日 2005-08-24 公開日 2006-01-18 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (0.98 Å) 主引用文献 Crystal Structures of Eosinophil-Derived Neurotoxin (Edn) in Complex with the Inhibitors 5'- ATP, Ap(3)A, Ap(4)A, and Ap(5)A. Biochemistry, 45, 2006
2C01	Crystal Structures of Eosinophil-derived Neurotoxin in Complex with the Inhibitors 5'-ATP, Ap3A, Ap4A and Ap5A 分子名称: ACETIC ACID, ADENOSINE-5'-TRIPHOSPHATE, NONSECRETORY RIBONUCLEASE 著者 Baker, M.D, Holloway, D.E, Swaminathan, G.J, Acharya, K.R. 登録日 2005-08-24 公開日 2006-01-18 最終更新日 2024-10-16 実験手法 X-RAY DIFFRACTION (1.24 Å) 主引用文献 Crystal Structures of Eosinophil-Derived Neurotoxin (Edn) in Complex with the Inhibitors 5'- ATP, Ap(3)A, Ap(4)A, and Ap(5)A. Biochemistry, 45, 2006
2C05	Crystal Structures of Eosinophil-derived Neurotoxin in Complex with the Inhibitors 5'-ATP, Ap3A, Ap4A and Ap5A 分子名称: ACETIC ACID, BIS(ADENOSINE)-5'-TETRAPHOSPHATE, NONSECRETORY RIBONUCLEASE 著者 Baker, M.D, Holloway, D.E, Swaminathan, G.J, Acharya, K.R. 登録日 2005-08-25 公開日 2006-01-18 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (1.86 Å) 主引用文献 Crystal Structures of Eosinophil-Derived Neurotoxin (Edn) in Complex with the Inhibitors 5'- ATP, Ap(3)A, Ap(4)A, and Ap(5)A. Biochemistry, 45, 2006
2C02	Crystal Structures of Eosinophil-derived Neurotoxin in Complex with the Inhibitors 5'-ATP, Ap3A, Ap4A and Ap5A 分子名称: ACETIC ACID, ADENOSINE-5'-DIPHOSPHATE, NONSECRETORY RIBONUCLEASE 著者 Baker, M.D, Holloway, D.E, Swaminathan, G.J, Acharya, K.R. 登録日 2005-08-24 公開日 2006-01-18 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Crystal Structures of Eosinophil-Derived Neurotoxin (Edn) in Complex with the Inhibitors 5'- ATP, Ap(3)A, Ap(4)A, and Ap(5)A. Biochemistry, 45, 2006
2BEF	CRYSTAL STRUCTURE OF NDP KINASE COMPLEXED WITH MG, ADP, AND BEF3 分子名称: ADENOSINE-5'-DIPHOSPHATE, BERYLLIUM TRIFLUORIDE ION, MAGNESIUM ION, ... 著者 Xu, Y.W, Cherfils, J. 登録日 1998-05-26 公開日 1998-08-12 最終更新日 2024-10-16 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 AlF3 mimics the transition state of protein phosphorylation in the crystal structure of nucleoside diphosphate kinase and MgADP. Proc.Natl.Acad.Sci.USA, 94, 1997

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