Loading
PDBj
メニューPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

2YAN
DownloadVisualize
BU of 2yan by Molmil
Crystal structure of the second glutaredoxin domain of human TXNL2
分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, FE (III) ION, ...
著者Vollmar, M, Johansson, C, Cocking, R, Muniz, J.R.C, Krojer, T, Allerston, C, von Delft, F, Bountra, C, Arrowsmith, C.H, Weigelt, J, Edwards, A, Oppermann, U.
登録日2011-02-23
公開日2011-11-30
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal Structure of the Second Glutaredoxin Domain of Human Txnl2
To be Published
4LRG
DownloadVisualize
BU of 4lrg by Molmil
Structure of BRD4 bromodomain 1 with a dimethyl thiophene isoxazole azepine carboxamide
分子名称: 2-[(6S)-4-(4-chlorophenyl)-2,3,9-trimethyl-6H-[1,2]oxazolo[5,4-c]thieno[2,3-e]azepin-6-yl]acetamide, Bromodomain-containing protein 4
著者Ravichandran, S, Jayaram, H, Poy, F, Gehling, V, Hewitt, M, Vaswani, R, Leblanc, Y, Cote, A, Nasveschuk, C, Taylor, A, Harmange, J.-C, Audia, J, Pardo, E, Joshi, S, Sandy, P, Mertz, J, Sims, R, Bergeron, L, Bryant, B, Yellapuntala, S, Nandana, B.S, Birudukota, S, Albrecht, B, Bellon, S.
登録日2013-07-19
公開日2013-08-07
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.21 Å)
主引用文献Discovery, Design, and Optimization of Isoxazole Azepine BET Inhibitors.
ACS Med Chem Lett, 4, 2013
4HNM
DownloadVisualize
BU of 4hnm by Molmil
Crystal structure of human catenin-beta-like 1 56 kDa fragment
分子名称: Beta-catenin-like protein 1
著者Du, Z, Huang, X, Wang, G, Wu, Y.
登録日2012-10-19
公開日2013-07-31
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (2.9001 Å)
主引用文献The structure of full-length human CTNNBL1 reveals a distinct member of the armadillo-repeat protein family.
Acta Crystallogr.,Sect.D, 69, 2013
3WK8
DownloadVisualize
BU of 3wk8 by Molmil
Crystal structure of soluble epoxide hydrolase in complex with fragment inhibitor
分子名称: 6-(trifluoromethyl)-1,3-benzothiazol-2-amine, Bifunctional epoxide hydrolase 2, MAGNESIUM ION, ...
著者Amano, Y, Yamaguchi, T, Tanabe, E.
登録日2013-10-17
公開日2014-04-16
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structural insights into binding of inhibitors to soluble epoxide hydrolase gained by fragment screening and X-ray crystallography.
Bioorg.Med.Chem., 22, 2014
4MDO
DownloadVisualize
BU of 4mdo by Molmil
Crystal structure of a GH1 beta-glucosidase from the fungus Humicola insolens
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Beta-glucosidase, DI(HYDROXYETHYL)ETHER, ...
著者Giuseppe, P.O, Souza, T.A.C.B, Souza, F.H.M, Zanphorlin, L.M, Machado, C.B, Ward, R.J, Jorge, J.A, Furriel, R.P.M, Murakami, M.T.
登録日2013-08-23
公開日2014-06-25
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Structural basis for glucose tolerance in GH1 beta-glucosidases.
Acta Crystallogr.,Sect.D, 70, 2014
2COG
DownloadVisualize
BU of 2cog by Molmil
Crystal structure of oxidized human cytosolic branched-chain aminotransferase complexed with 4-methylvalerate
分子名称: 4-METHYL VALERIC ACID, MAGNESIUM ION, PYRIDOXAL-5'-PHOSPHATE, ...
著者Goto, M.
登録日2005-05-17
公開日2005-08-30
最終更新日2021-11-10
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structural determinants for branched-chain aminotransferase isozyme-specific inhibition by the anticonvulsant drug gabapentin
J.Biol.Chem., 280, 2005
2VMF
DownloadVisualize
BU of 2vmf by Molmil
Structural and biochemical evidence for a boat-like transition state in beta-mannosidases
分子名称: (5R,6R,7S,8R)-5-(HYDROXYMETHYL)-5,6,7,8-TETRAHYDROIMIDAZO[1,2-A]PYRIDINE-6,7,8-TRIOL, 1,2-ETHANEDIOL, BETA-MANNOSIDASE, ...
著者Tailford, L.E, Offen, W.A, Smith, N.L, Dumon, C, Moreland, C, Gratien, J, Heck, M.P, Stick, R.V, Bleriot, Y, Vasella, A, Gilbert, H.J, Davies, G.J.
登録日2008-01-25
公開日2008-04-01
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structural and Biochemical Evidence for a Boat-Like Transition State in Beta-Mannosidases.
Nat.Chem.Biol., 4, 2008
9BFS
DownloadVisualize
BU of 9bfs by Molmil
Cryo-EM structure of Sevenless extracellular domain (dimer, pH 6.6)
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Cerutti, G, Shapiro, L.
登録日2024-04-18
公開日2025-01-29
最終更新日2025-05-21
実験手法ELECTRON MICROSCOPY (3.06 Å)
主引用文献Structures and pH-dependent dimerization of the sevenless receptor tyrosine kinase.
Mol.Cell, 84, 2024
1ZPE
DownloadVisualize
BU of 1zpe by Molmil
Arginase I covalently modified with butylamine at Q19C
分子名称: Arginase 1, MANGANESE (II) ION
著者Colleluori, D.M, Reczkowski, R.S, Emig, F.A, Cama, E, Cox, J.D, Scolnick, L.R, Compher, K, Jude, K, Han, S, Viola, R.E, Christianson, D.W, Ash, D.E.
登録日2005-05-16
公開日2005-12-06
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Probing the role of the hyper-reactive histidine residue of arginase.
Arch.Biochem.Biophys., 444, 2005
4ED7
DownloadVisualize
BU of 4ed7 by Molmil
Human DNA polymerase eta - DNA ternary complex: TG crystal at pH 7.0 (K+ MES) with 1 Ca2+ ion
分子名称: 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE, CALCIUM ION, DNA (5'-D(*CP*AP*TP*TP*AP*TP*GP*AP*CP*GP*CP*G)-3'), ...
著者Nakamura, T, Zhao, Y, Yang, W.
登録日2012-03-27
公開日2012-07-11
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.717 Å)
主引用文献Watching DNA polymerase eta make a phosphodiester bond
Nature, 487, 2012
9BFU
DownloadVisualize
BU of 9bfu by Molmil
Cryo-EM structure of Sevenless extracellular domain (composite map of the dimer, pH 4.6)
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Cerutti, G, Shapiro, L.
登録日2024-04-18
公開日2025-01-29
最終更新日2025-06-04
実験手法ELECTRON MICROSCOPY (4.07 Å)
主引用文献Structures and pH-dependent dimerization of the sevenless receptor tyrosine kinase.
Mol.Cell, 84, 2024
4EE0
DownloadVisualize
BU of 4ee0 by Molmil
Crystal structure of hH-PGDS with water displacing inhibitor
分子名称: 4-(isoquinolin-1-yl)-N-[2-(morpholin-4-yl)ethyl]benzamide, Hematopoietic prostaglandin D synthase, L-GAMMA-GLUTAMYL-3-SULFINO-L-ALANYLGLYCINE, ...
著者Day, J.E, Thorarensen, A, Trujillo, J.I.
登録日2012-03-28
公開日2012-07-18
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Investigation of the binding pocket of human hematopoietic prostaglandin (PG) D2 synthase (hH-PGDS): a tale of two waters.
Bioorg.Med.Chem.Lett., 22, 2012
9SL8
DownloadVisualize
BU of 9sl8 by Molmil
Structure of recombinant human butyrylcholinesterase in complex with naphthalen-2-yl methyl((2S,3R)-2-(pyridin-3-ylmethyl)quinuclidin-3-yl)carbamate
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Brazzolotto, X, Mastnak-Sokolov, P, Nachon, F, Gobec, S.
登録日2025-09-03
公開日2025-11-26
実験手法X-RAY DIFFRACTION (2.52 Å)
主引用文献Dual cholinergic modulation in dementia: Quinuclidine carbamates targeting butyrylcholinesterase and alpha 7 nicotinic receptor.
Chem.Biol.Interact., 423, 2025
9NHM
DownloadVisualize
BU of 9nhm by Molmil
BG505-CH505 Env glycoprotein in complex with NHP pAb V1V2V3-1 isolated from animal RUu18 at week 14
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Pratap, P.P, Ozorowski, G, Ward, A.B.
登録日2025-02-24
公開日2025-06-25
最終更新日2025-09-03
実験手法ELECTRON MICROSCOPY (4 Å)
主引用文献Immunofocusing on the conserved fusion peptide of HIV envelope glycoprotein in rhesus macaques.
Npj Vaccines, 10, 2025
9NHL
DownloadVisualize
BU of 9nhl by Molmil
BG505-CH505 Env glycoprotein in complex with NHP pAb FP-1 isolated from animal RUu18 at week 14
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Pratap, P.P, Ozorowski, G, Ward, A.B.
登録日2025-02-24
公開日2025-06-25
最終更新日2025-09-03
実験手法ELECTRON MICROSCOPY (3.7 Å)
主引用文献Immunofocusing on the conserved fusion peptide of HIV envelope glycoprotein in rhesus macaques.
Npj Vaccines, 10, 2025
4MGV
DownloadVisualize
BU of 4mgv by Molmil
Crystal structure of FK506 binding domain of plasmodium VIVAX FKBP35 In complex with inhibitor D5
分子名称: 70 kDa peptidylprolyl isomerase, putative, N'-(1-adamantylcarbonyl)pyridine-4-carbohydrazide
著者Rajan, S, Harikishore, A, Yoon, H.S.
登録日2013-08-29
公開日2013-12-04
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (1.72 Å)
主引用文献Adamantyl derivative as a potent inhibitor of Plasmodium FK506 binding protein 35.
Acs Med.Chem.Lett., 4, 2013
2V4O
DownloadVisualize
BU of 2v4o by Molmil
Crystal structure of Salmonella typhimurium SurE at 2.75 angstrom resolution in monoclinic form
分子名称: GLYCEROL, MAGNESIUM ION, MULTIFUNCTIONAL PROTEIN SUR E, ...
著者Anju, P, Savithri, H.S, Murthy, M.R.N.
登録日2008-09-26
公開日2008-12-09
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.71 Å)
主引用文献Structural and Functional Studies on a Mesophilic Stationary Phase Survival Protein (Sur E) from Salmonella Typhimurium
FEBS J., 275, 2008
4P5R
DownloadVisualize
BU of 4p5r by Molmil
Structure of oxidized W45Y mutant of amicyanin
分子名称: Amicyanin, COPPER (II) ION, SODIUM ION
著者Sukumar, N, Davidson, V.L.
登録日2014-03-19
公開日2014-04-23
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.09 Å)
主引用文献The sole tryptophan of amicyanin enhances its thermal stability but does not influence the electronic properties of the type 1 copper site.
Arch.Biochem.Biophys., 550-551, 2014
6IVD
DownloadVisualize
BU of 6ivd by Molmil
TGEV nsp1 mutant - 91-95sg
分子名称: nsp1 mutant protein
著者Shen, Z, Peng, G.Q.
登録日2018-12-03
公開日2019-08-07
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (1.975 Å)
主引用文献A conserved region of nonstructural protein 1 from alphacoronaviruses inhibits host gene expression and is critical for viral virulence.
J.Biol.Chem., 294, 2019
2VLY
DownloadVisualize
BU of 2vly by Molmil
Crystal structure of myoglobin compound III (radiation-induced)
分子名称: GLYCEROL, HYDROGEN PEROXIDE, MYOGLOBIN, ...
著者Hersleth, H.-P, Gorbitz, C.H, Andersson, K.K.
登録日2008-01-20
公開日2008-01-29
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献The Crystal Structure of Peroxymyoglobin Generated Through Cryoradiolytic Reduction of Myoglobin Compound III During Data Collection.
Biochem.J., 412, 2008
2VLZ
DownloadVisualize
BU of 2vlz by Molmil
Crystal structure of peroxymyoglobin generated by cryoradiolytic reduction of myoglobin compound III
分子名称: GLYCEROL, HYDROGEN PEROXIDE, MYOGLOBIN, ...
著者Hersleth, H.-P, Gorbitz, C.H, Andersson, K.K.
登録日2008-01-20
公開日2008-01-29
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献The Crystal Structure of Peroxymyoglobin Generated Through Cryoradiolytic Reduction of Myoglobin Compound III During Data Collection.
Biochem.J., 412, 2008
1HOV
DownloadVisualize
BU of 1hov by Molmil
SOLUTION STRUCTURE OF A CATALYTIC DOMAIN OF MMP-2 COMPLEXED WITH SC-74020
分子名称: CALCIUM ION, MATRIX METALLOPROTEINASE-2, N-{4-[(1-HYDROXYCARBAMOYL-2-METHYL-PROPYL)-(2-MORPHOLIN-4-YL-ETHYL)-SULFAMOYL]-4-PENTYL-BENZAMIDE, ...
著者Feng, Y, Likos, J.J, Zhu, L, Woodward, H, Munie, G, McDonald, J.J, Stevens, A.M, Howard, C.P, De Crescenzo, G.A, Welsch, D, Shieh, H.-S, Stallings, W.C.
登録日2000-12-11
公開日2001-12-12
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Solution structure and backbone dynamics of the catalytic domain of matrix metalloproteinase-2 complexed with a hydroxamic acid inhibitor
Biochim.Biophys.Acta, 1598, 2002
5RL9
DownloadVisualize
BU of 5rl9 by Molmil
PanDDA analysis group deposition -- Crystal Structure of SARS-CoV-2 helicase in complex with Z1703168683
分子名称: 1-(3-fluoro-4-methylphenyl)methanesulfonamide, Helicase, PHOSPHATE ION, ...
著者Newman, J.A, Yosaatmadja, Y, Douangamath, A, Aimon, A, Powell, A.J, Dias, A, Fearon, D, Dunnett, L, Brandao-Neto, J, Krojer, T, Skyner, R, Gorrie-Stone, T, Thompson, W, von Delft, F, Arrowsmith, C.H, Edwards, A, Bountra, C, Gileadi, O.
登録日2020-09-16
公開日2020-09-30
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (1.788 Å)
主引用文献Structure, mechanism and crystallographic fragment screening of the SARS-CoV-2 NSP13 helicase.
Nat Commun, 12, 2021
9OMG
DownloadVisualize
BU of 9omg by Molmil
Cryo-EM structure of rhesus antibody V033-a.I1 in complex with HIV Env trimer Q23.17 MD39
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, HIV Env gp120, ...
著者Roark, R.S, Shapiro, L, Kwong, P.D.
登録日2025-05-13
公開日2025-11-05
実験手法ELECTRON MICROSCOPY (3.6 Å)
主引用文献Env-antibody coevolution identifies B cell priming as the principal bottleneck to HIV-1 V2 apex broadly neutralizing antibody development
To Be Published
5PBR
DownloadVisualize
BU of 5pbr by Molmil
PanDDA analysis group deposition -- Crystal Structure of BAZ2B after initial refinement with no ligand modelled (structure 12)
分子名称: 1,2-ETHANEDIOL, Bromodomain adjacent to zinc finger domain protein 2B
著者Pearce, N.M, Krojer, T, Talon, R, Bradley, A.R, Fairhead, M, Sethi, R, Wright, N, MacLean, E, Collins, P, Brandao-Neto, J, Douangamath, A, Renjie, Z, Dias, A, Vollmar, M, Ng, J, Brennan, P.E, Cox, O, Bountra, C, Arrowsmith, C.H, Edwards, A, von Delft, F.
登録日2017-02-03
公開日2017-03-22
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (1.81 Å)
主引用文献A multi-crystal method for extracting obscured crystallographic states from conventionally uninterpretable electron density.
Nat Commun, 8, 2017

245663

件を2025-12-03に公開中

PDB statisticsPDBj update infoContact PDBjnumon