PDB: 1466 件ウェブページステータス検索Chemie searchBIRD

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7BWD	Structure of Dot1L-H2BK34ub Nucleosome Complex 分子名称: DNA (146-MER), Histone H2A type 1-B/E, Histone H2B type 1-K, ... 著者 Lou, Z.Y, Liu, L, Cao, L, Ai, H.S, Sun, Z.X. 登録日 2020-04-14 公開日 2021-04-14 実験手法 ELECTRON MICROSCOPY (4.32 Å) 主引用文献 Structure of the Dot1L-H2BK34ub Nucleosome Complex Reveals an Unprecedented Crosstalk Activation Mechanism through Nucleosome Shape Distortion To Be Published
6WJD	SA-like state of human 26S Proteasome with non-cleavable M1-linked hexaubiquitin and E3 ubiquitin ligase E6AP/UBE3A 分子名称: 26S proteasome complex subunit SEM1, 26S proteasome non-ATPase regulatory subunit 1, 26S proteasome non-ATPase regulatory subunit 11, ... 著者 Chen, X, Walters, K.J. 登録日 2020-04-13 公開日 2020-08-05 最終更新日 2024-03-06 実験手法 ELECTRON MICROSCOPY (4.8 Å) 主引用文献 Cryo-EM Reveals Unanchored M1-Ubiquitin Chain Binding at hRpn11 of the 26S Proteasome. Structure, 28, 2020
7BU0	Crystal structure of a OTU deubiquitinase in complex with Ub-PA 分子名称: Polyubiquitin-B, Uncharacterized protein, prop-2-en-1-amine 著者 Ouyang, S.Y, Zhen, X.K. 登録日 2020-04-03 公開日 2020-11-18 最終更新日 2023-04-05 実験手法 X-RAY DIFFRACTION (2.43 Å) 主引用文献 Interplay between bacterial deubiquitinase and ubiquitin E3 ligase regulates ubiquitin dynamics on Legionella phagosomes. Elife, 9, 2020
6W9S	Crystal structure of an OTU deubiquitinase from Escherichia albertii bound to ubiquitin 分子名称: FORMIC ACID, OTU domain-containing protein EschOTU, Ubiquitin 著者 Schubert, A.F, Pruneda, J.N, Komander, D. 登録日 2020-03-23 公開日 2020-07-01 最終更新日 2020-08-12 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Identification and characterization of diverse OTU deubiquitinases in bacteria. Embo J., 39, 2020
6W9R	Crystal structure of an OTU deubiquitinase from Wolbachia pipientis wMel bound to ubiquitin 分子名称: CITRATE ANION, OTU domain-containing protein wMelOTU, Ubiquitin 著者 Schubert, A.F, Pruneda, J.N, Komander, D. 登録日 2020-03-23 公開日 2020-07-01 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (1.82 Å) 主引用文献 Identification and characterization of diverse OTU deubiquitinases in bacteria. Embo J., 39, 2020
6W9D	RNF12 RING domain in complex with a Ube2d2~Ub conjugate 分子名称: E3 ubiquitin-protein ligase RLIM, IODIDE ION, Ubiquitin, ... 著者 Middleton, A.J, Day, C.L. 登録日 2020-03-22 公開日 2020-05-20 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (3.19 Å) 主引用文献 The RING Domain of RING Finger 12 Efficiently Builds Degradative Ubiquitin Chains. J.Mol.Biol., 432, 2020
6YBS	Structure of a human 48S translational initiation complex - head 分子名称: 18S rRNA, 40S ribosomal protein S10, 40S ribosomal protein S12, ... 著者 Brito Querido, J, Sokabe, M, Kraatz, S, Gordiyenko, Y, Skehel, M, Fraser, C, Ramakrishnan, V. 登録日 2020-03-17 公開日 2020-09-16 最終更新日 2024-04-24 実験手法 ELECTRON MICROSCOPY (3.1 Å) 主引用文献 Structure of a human 48Stranslational initiation complex. Science, 369, 2020
6YAN	Mammalian 48S late-stage translation initiation complex with histone 4 mRNA 分子名称: 18S ribosomal RNA, 40S ribosomal protein S12, 40S ribosomal protein S21, ... 著者 Bochler, A, Simonetti, A, Guca, E, Hashem, Y. 登録日 2020-03-12 公開日 2020-04-08 最終更新日 2020-04-22 実験手法 ELECTRON MICROSCOPY (3.48 Å) 主引用文献 Structural Insights into the Mammalian Late-Stage Initiation Complexes. Cell Rep, 31, 2020
6YAM	Mammalian 48S late-stage translation initiation complex (LS48S+eIF3 IC) with beta-globin mRNA 分子名称: 18S ribosomal RNA, 40S ribosomal protein eS1, 40S ribosomal protein eS10, ... 著者 Bochler, A, Simonetti, A, Guca, E, Hashem, Y. 登録日 2020-03-12 公開日 2020-04-08 最終更新日 2020-04-22 実験手法 ELECTRON MICROSCOPY (3.6 Å) 主引用文献 Structural Insights into the Mammalian Late-Stage Initiation Complexes. Cell Rep, 31, 2020
6YAL	Mammalian 48S late-stage initiation complex with beta-globin mRNA 分子名称: 18S ribosomal RNA, 40S Ribosomal protein uS3, 40S Ribosomal protein uS7, ... 著者 Bochler, A, Simonetti, A, Guca, E, Hashem, Y. 登録日 2020-03-12 公開日 2020-04-08 最終更新日 2020-04-22 実験手法 ELECTRON MICROSCOPY (3 Å) 主引用文献 Structural Insights into the Mammalian Late-Stage Initiation Complexes. Cell Rep, 31, 2020
6W2T	Structure of the Cricket Paralysis Virus 5-UTR IRES (CrPV 5-UTR-IRES) bound to the small ribosomal subunit in the closed state (Class 2) 分子名称: 18S rRNA, CrPV 5'-UTR IRES, Eukaryotic translation initiation factor 3 subunit A, ... 著者 Neupane, R, Pisareva, V, Rodriguez, C.F, Pisarev, A, Fernandez, I.S. 登録日 2020-03-08 公開日 2020-04-22 最終更新日 2024-03-20 実験手法 ELECTRON MICROSCOPY (3.36 Å) 主引用文献 A complex IRES at the 5'-UTR of a viral mRNA assembles a functional 48S complex via an uAUG intermediate. Elife, 9, 2020
6W2S	Structure of the Cricket Paralysis Virus 5-UTR IRES (CrPV 5-UTR-IRES) bound to the small ribosomal subunit in the open state (Class 1) 分子名称: 18S rRNA, CrPV 5'-UTR IRES, Eukaryotic translation initiation factor 3 subunit A, ... 著者 Neupane, R, Pisareva, V, Rodriguez, C.F, Pisarev, A, Fernandez, I.S. 登録日 2020-03-08 公開日 2020-04-22 最終更新日 2024-03-06 実験手法 ELECTRON MICROSCOPY (3.47 Å) 主引用文献 A complex IRES at the 5'-UTR of a viral mRNA assembles a functional 48S complex via an uAUG intermediate. Elife, 9, 2020
6Y5Q	human 17S U2 snRNP 分子名称: HIV Tat-specific factor 1, PHD finger-like domain-containing protein 5A, Probable ATP-dependent RNA helicase DDX46, ... 著者 Zhang, Z, Will, C.L, Bertram, K, Luehrmann, R, Stark, H. 登録日 2020-02-25 公開日 2020-06-17 最終更新日 2024-05-15 実験手法 ELECTRON MICROSCOPY (7.1 Å) 主引用文献 Molecular architecture of the human 17S U2 snRNP. Nature, 583, 2020
6Y57	Structure of human ribosome in hybrid-PRE state 分子名称: 18S ribosomal RNA, 28S ribosomal RNA, 40S ribosomal protein S10, ... 著者 Bhaskar, V, Schenk, A.D, Cavadini, S, von Loeffelholz, O, Natchiar, S.K, Klaholz, B.P, Chao, J.A. 登録日 2020-02-25 公開日 2020-04-15 最終更新日 2024-05-22 実験手法 ELECTRON MICROSCOPY (3.5 Å) 主引用文献 Dynamics of uS19 C-Terminal Tail during the Translation Elongation Cycle in Human Ribosomes. Cell Rep, 31, 2020
6Y53	human 17S U2 snRNP low resolution part 分子名称: HIV Tat-specific factor 1, Probable ATP-dependent RNA helicase DDX46, Small nuclear ribonucleoprotein E, ... 著者 Zhang, Z, Will, C.L, Bertram, K, Luehrmann, R, Stark, H. 登録日 2020-02-24 公開日 2020-06-17 最終更新日 2024-05-22 実験手法 ELECTRON MICROSCOPY (7.1 Å) 主引用文献 Molecular architecture of the human 17S U2 snRNP. Nature, 583, 2020
6VW2	Cryo-EM structure of human islet amyloid polypeptide (hIAPP, or amylin) fibrils 分子名称: Islet amyloid polypeptide (SUMO-tagged) 著者 Cao, Q, Boyer, D.R, Sawaya, M.R, Eisenberg, D.S. 登録日 2020-02-18 公開日 2020-06-10 最終更新日 2024-03-06 実験手法 ELECTRON MICROSCOPY (3.4 Å) 主引用文献 Cryo-EM structure and inhibitor design of human IAPP (amylin) fibrils. Nat.Struct.Mol.Biol., 27, 2020
6Y2L	Structure of human ribosome in POST state 分子名称: 18S ribosomal RNA, 28S ribosomal RNA, 4-{(2R)-2-[(1S,3S,5S)-3,5-dimethyl-2-oxocyclohexyl]-2-hydroxyethyl}piperidine-2,6-dione, ... 著者 Bhaskar, V, Schenk, A.D, Cavadini, S, von Loeffelholz, O, Natchiar, S.K, Klaholz, B.P, Chao, J.A. 登録日 2020-02-16 公開日 2020-04-15 最終更新日 2024-05-22 実験手法 ELECTRON MICROSCOPY (3 Å) 主引用文献 Dynamics of uS19 C-Terminal Tail during the Translation Elongation Cycle in Human Ribosomes. Cell Rep, 31, 2020
6Y0G	Structure of human ribosome in classical-PRE state 分子名称: 18S ribosomal RNA, 28S ribosomal RNA, 4-{(2R)-2-[(1S,3S,5S)-3,5-dimethyl-2-oxocyclohexyl]-2-hydroxyethyl}piperidine-2,6-dione, ... 著者 Bhaskar, V, Schenk, A.D, Cavadini, S, von Loeffelholz, O, Natchiar, S.K, Klaholz, B.P, Chao, J.A. 登録日 2020-02-07 公開日 2020-04-15 最終更新日 2024-05-22 実験手法 ELECTRON MICROSCOPY (3.2 Å) 主引用文献 Dynamics of uS19 C-Terminal Tail during the Translation Elongation Cycle in Human Ribosomes. Cell Rep, 31, 2020
6XZ1	Conjugate of the HECT domain of HUWE1 with ubiquitin 分子名称: HECT, UBA and WWE domain containing 1, isoform CRA_a, ... 著者 Liu, B, Seenivasan, A, Nair, R, Chen, D, Lowe, E.D, Lorenz, S. 登録日 2020-01-31 公開日 2021-08-25 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Reconstitution and Structural Analysis of a HECT Ligase-Ubiquitin Complex via an Activity-Based Probe. Acs Chem.Biol., 16, 2021
6TXB	Crystal structure of Mindy1 mutant (P138A) in complex with Lys48 linked di-ubiquitin 分子名称: CHLORIDE ION, Polyubiquitin-C, SODIUM ION, ... 著者 Abdul Rehman, S.A, Kulathu, Y. 登録日 2020-01-14 公開日 2021-01-27 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (2.18 Å) 主引用文献 Mechanism of activation and regulation of deubiquitinase activity in MINDY1 and MINDY2. Mol.Cell, 81, 2021
6LQM	Cryo-EM structure of a pre-60S ribosomal subunit - state C 分子名称: 28S rRNA, 5.8S rRNA, 5S rRNA, ... 著者 Liang, X, Zuo, M, Zhang, Y, Li, N, Ma, C, Dong, M, Gao, N. 登録日 2020-01-14 公開日 2020-08-26 実験手法 ELECTRON MICROSCOPY (3.09 Å) 主引用文献 Structural snapshots of human pre-60S ribosomal particles before and after nuclear export. Nat Commun, 11, 2020
6TUV	Crystal structure of Mindy1 in complex with Lys48 linked di-ubiquitin 分子名称: Polyubiquitin-C, SULFATE ION, Ubiquitin carboxyl-terminal hydrolase MINDY-1 著者 Abdul Rehman, S.A, Kulathu, Y. 登録日 2020-01-08 公開日 2021-01-27 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (2.16 Å) 主引用文献 Mechanism of activation and regulation of deubiquitinase activity in MINDY1 and MINDY2. Mol.Cell, 81, 2021
6LP2	Structure of Lpg2148/UBE2N-Ub complex 分子名称: Ubiquitin, Ubiquitin-conjugating enzyme E2 N, Uncharacterized protein lpg2148 著者 Feng, Y, Wang, Y, Huang, Y, Li, D. 登録日 2020-01-08 公開日 2021-01-13 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (2.479 Å) 主引用文献 Structure of Lpg2148/UBE2N-Ub complex To Be Published
6VEL	Crystal Structure of Human E-cadherin bound by mouse monoclonal antibody 66E8Fab 分子名称: 66E8 Fab Heavy Chain, 66E8 Fab Light Chain, CALCIUM ION, ... 著者 Seattle Structural Genomics Center for Infectious Disease, Seattle Structural Genomics Center for Infectious Disease (SSGCID) 登録日 2020-01-02 公開日 2020-01-29 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (2.65 Å) 主引用文献 Regulation of multiple dimeric states of E-cadherin by adhesion activating antibodies revealed through Cryo-EM and X-ray crystallography. Pnas Nexus, 1, 2022
6VEN	Yeast COMPASS in complex with a ubiquitinated nucleosome 分子名称: 601 DNA (146-MER), COMPASS component BRE2, COMPASS component SDC1, ... 著者 Worden, E.J, Wolberger, C. 登録日 2020-01-02 公開日 2020-01-15 最終更新日 2020-01-22 実験手法 ELECTRON MICROSCOPY (3.37 Å) 主引用文献 Structural basis for COMPASS recognition of an H2B-ubiquitinated nucleosome. Elife, 9, 2020

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