PDB: 222415 件ウェブページステータス検索Chemie searchBIRD

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3AOB	Structures of the multidrug exporter AcrB reveal a proximal multisite drug-binding pocket 分子名称: Acriflavine resistance protein B, RIFAMPICIN 著者 Nakashima, R, Sakurai, K, Yamaguchi, A. 登録日 2010-09-23 公開日 2011-11-30 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (3.35 Å) 主引用文献 Structures of the multidrug exporter AcrB reveal a proximal multisite drug-binding pocket Nature, 480, 2011
3AMO	Time-resolved X-ray Crystal Structure Analysis of Enzymatic Reaction of Copper Amine Oxidase from Arthrobacter globiformis 分子名称: COPPER (II) ION, GLYCEROL, Phenylethylamine oxidase, ... 著者 Kataoka, M, Oya, H, Tominaga, A, Otsu, M, Okajima, T, Tanizawa, K, Yamaguchi, H. 登録日 2010-08-20 公開日 2011-11-23 最終更新日 2017-10-11 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Detection of the reaction intermediates catalyzed by a copper amine oxidase. J.SYNCHROTRON RADIAT., 18, 2011
3ANP	Crystal structure of Thermus thermophilus FadR, a TetR familly transcriptional repressor, in complex with lauroyl-CoA. 分子名称: DODECYL-COA, LAURIC ACID, Transcriptional repressor, ... 著者 Agari, Y, Agari, K, Sakamoto, K, Kuramitsu, S, Shinkai, A. 登録日 2010-09-06 公開日 2011-03-09 最終更新日 2017-10-11 実験手法 X-RAY DIFFRACTION (1.95 Å) 主引用文献 TetR-family transcriptional repressor Thermus thermophilus FadR controls fatty acid degradation. Microbiology, 157, 2011
3AOC	Structures of the multidrug exporter AcrB reveal a proximal multisite drug-binding pocket 分子名称: Acriflavine resistance protein B, ERYTHROMYCIN A 著者 Nakashima, R, Sakurai, K, Yamaguchi, A. 登録日 2010-09-23 公開日 2011-11-30 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (3.34 Å) 主引用文献 Structures of the multidrug exporter AcrB reveal a proximal multisite drug-binding pocket Nature, 480, 2011
3BKK	Tesis ACE co-crystal structure with ketone ACE inhibitor kAF 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, Angiotensin-converting enzyme, ... 著者 Watermeyer, J.M, Kroger, W.L, O'Neill, H.G, Sewell, B.T, Sturrock, E.D. 登録日 2007-12-07 公開日 2008-06-10 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (2.17 Å) 主引用文献 Probing the basis of domain-dependent inhibition using novel ketone inhibitors of Angiotensin-converting enzyme Biochemistry, 47, 2008
3BLF	Crystal structure of the catalytic domain of LiCMS in complexed with pyruvate 分子名称: Citramalate synthase from Leptospira interrogans, PYRUVIC ACID, ZINC ION 著者 Zhang, P, Ma, J. 登録日 2007-12-11 公開日 2008-11-11 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (2.6 Å) 主引用文献 Molecular basis of the substrate specificity and the catalytic mechanism of citramalate synthase from Leptospira interrogans. Biochem.J., 415, 2008
3BNR	Crystal Structure of the Homo sapiens Mitochondrial Ribosomal Decoding Site in the presence of nonspecifically bound paromomycin (A1555G mutant, Br-derivative) 分子名称: A site of human mitochondrial ribosome, chain one, chain three, ... 著者 Kondo, J, Westhof, E. 登録日 2007-12-14 公開日 2008-06-24 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 The bacterial and mitochondrial ribosomal A-site molecular switches possess different conformational substates Nucleic Acids Res., 36, 2008
3BNS	Crystal Structure of the Homo sapiens Mitochondrial Ribosomal Decoding Site (A1555G mutant, Br-derivative) 分子名称: A site of human mitochondrial ribosome, chain three, chain two, ... 著者 Kondo, J, Westhof, E. 登録日 2007-12-14 公開日 2008-06-24 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 The bacterial and mitochondrial ribosomal A-site molecular switches possess different conformational substates Nucleic Acids Res., 36, 2008
3BPC	co-crystal structure of S25-2 Fab in complex with 5-deoxy-4-epi-2,3-dehydro Kdo (4.8) Kdo 分子名称: 3,4,5-trideoxy-alpha-D-erythro-oct-3-en-2-ulopyranosonic acid-(2-8)-prop-2-en-1-yl 3-deoxy-alpha-D-manno-oct-2-ulopyranosidonic acid, Fab, antibody fragment (IgG1k), ... 著者 Brooks, C.L, Evans, S.V. 登録日 2007-12-18 公開日 2009-01-13 最終更新日 2020-07-29 実験手法 X-RAY DIFFRACTION (1.85 Å) 主引用文献 Exploration of specificity in germline monoclonal antibody recognition of a range of natural and synthetic epitopes. J.Mol.Biol., 377, 2008
3BRI	Crystal Structure of apo-LC8 分子名称: ACETATE ION, Dynein light chain 1, cytoplasmic, ... 著者 Benison, G, Karplus, P.A, Barbar, E, Chiodo, M. 登録日 2007-12-21 公開日 2008-12-02 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 The Interplay of Ligand Binding and Quaternary Structure in the Diverse Interactions of Dynein Light Chain LC8. J.Mol.Biol., 384, 2008
3BQ2	Post-insertion binary complex of Dbh DNA polymerase 分子名称: CALCIUM ION, DNA (5'-D(*DGP*DAP*DAP*DGP*DCP*DCP*DGP*DGP*DCP*DGP*DG)-3'), DNA (5'-D(*DTP*DTP*DCP*DCP*DGP*DCP*DCP*DCP*DGP*DGP*DCP*DTP*DTP*DCP*DC)-3'), ... 著者 Pata, J.D, Wilson, R.C. 登録日 2007-12-19 公開日 2008-04-08 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (2.7 Å) 主引用文献 Structural insights into the generation of single-base deletions by the Y family DNA polymerase dbh. Mol.Cell, 29, 2008
3BSS	PglD from Campylobacter jejuni, NCTC 11168, with native substrate 分子名称: Acetyltransferase, UDP-2-acetamido-4-amino-2,4,6-trideoxy-alpha-D-glucopyranose 著者 Olivier, N.B, Imperiali, B. 登録日 2007-12-26 公開日 2008-07-22 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Crystal structure and catalytic mechanism of PglD from Campylobacter jejuni. J.Biol.Chem., 283, 2008
3BUS	Crystal Structure of RebM 分子名称: Methyltransferase, S-ADENOSYL-L-HOMOCYSTEINE 著者 McCoy, J.G, Singh, S, Bingman, C.A, Thorson, J.S, Phillips Jr, G.N. 登録日 2008-01-03 公開日 2008-03-25 最終更新日 2017-10-25 実験手法 X-RAY DIFFRACTION (2.65 Å) 主引用文献 Structure and mechanism of the rebeccamycin sugar 4'-O-methyltransferase RebM. J.Biol.Chem., 283, 2008
3RPD	The structure of a B12-independent methionine synthase from Shewanella sp. W3-18-1 in complex with Selenomethionine. 分子名称: GLYCEROL, Methionine synthase (B12-independent), SELENOMETHIONINE, ... 著者 Cuff, M.E, Li, H, Hatzos-Skintges, C, Tesar, C, Bearden, J, Clancy, A, Joachimiak, A, Midwest Center for Structural Genomics (MCSG) 登録日 2011-04-26 公開日 2011-08-31 最終更新日 2017-11-08 実験手法 X-RAY DIFFRACTION (1.5 Å) 主引用文献 The structure of a B12-independent methionine synthase from Shewanella sp. W3-18-1 in complex with Selenomethionine. TO BE PUBLISHED
3BZN	Crystal Structure of Open form of Menaquinone-Specific Isochorismate Synthase, MenF 分子名称: MAGNESIUM ION, Menaquinone-specific isochorismate synthase, SULFATE ION 著者 Parsons, J.F, Shi, K.M, Ladner, J.E. 登録日 2008-01-18 公開日 2008-05-20 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Structure of isochorismate synthase in complex with magnesium. Acta Crystallogr.,Sect.D, 64, 2008
3BWA	Crystal Structure of HLA B*3508 in complex with a HCMV 8-mer peptide from the pp65 protein 分子名称: Beta-2-microglobulin, FPT peptide from 65 kDa lower matrix phosphoprotein, HLA class I histocompatibility antigen, ... 著者 Wynn, K.K, Marland, Z, Cooper, L, Silins, S.L, Gras, S, Archbold, J.K, Tynan, F.E, Miles, J.J, McCluskey, J, Burrows, S.R, Rossjohn, J, Khanna, R. 登録日 2008-01-08 公開日 2008-04-22 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (1.3 Å) 主引用文献 Impact of clonal competition for peptide-MHC complexes on the CD8+ T-cell repertoire selection in a persistent viral infection Blood, 111, 2008
3C08	Crystal structure the Fab fragment of matuzumab/EMD72000 (Fab72000) 分子名称: Matuzumab Fab Heavy chain, Matuzumab Fab Light chain, SULFATE ION 著者 Ferguson, K.M, Schmiedel, J, Knoechel, T. 登録日 2008-01-18 公開日 2008-04-15 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (2.15 Å) 主引用文献 Matuzumab binding to EGFR prevents the conformational rearrangement required for dimerization. Cancer Cell, 13, 2008
3BWP	Crystal structure of a self-spliced group II intron 分子名称: Group IIC intron, MAGNESIUM ION, POTASSIUM ION 著者 Toor, N, Keating, K.S, Taylor, S.D, Pyle, A.M. 登録日 2008-01-10 公開日 2008-04-15 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (3.1 Å) 主引用文献 Crystal structure of a self-spliced group II intron Science, 320, 2008
3C1L	Crystal structure of an antioxidant defense protein (mlr4105) from mesorhizobium loti maff303099 at 2.00 A resolution 分子名称: CHLORIDE ION, DI(HYDROXYETHYL)ETHER, Putative antioxidant defense protein Mlr4105 著者 Joint Center for Structural Genomics (JCSG) 登録日 2008-01-23 公開日 2008-02-05 最終更新日 2023-02-01 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Crystal structure of putative antioxidant defense protein (NP_105057.1) from Mesorhizobium loti at 2.00 A resolution To be published
3BYD	Crystal structure of beta-lactamase OXY-1-1 from Klebsiella oxytoca 分子名称: ACETATE ION, Beta-lactamase OXY-1, SULFATE ION 著者 Liang, Y.-H, Wu, S.W, Su, X.-D. 登録日 2008-01-15 公開日 2009-01-20 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (1.93 Å) 主引用文献 Structural insights into the broadened substrate profile of the extended-spectrum beta-lactamase OXY-1-1 from Klebsiella oxytoca Acta Crystallogr.,Sect.D, 68, 2012
3BZB	Crystal structure of uncharacterized protein CMQ451C from the primitive red alga Cyanidioschyzon merolae 分子名称: Uncharacterized protein 著者 McCoy, J.G, Bitto, E, Bingman, C.A, Wesenberg, G.E, Phillips Jr, G.N, Center for Eukaryotic Structural Genomics (CESG) 登録日 2008-01-17 公開日 2008-01-29 最終更新日 2017-10-25 実験手法 X-RAY DIFFRACTION (2.79 Å) 主引用文献 Crystal structure of uncharacterized protein CMQ451C from the primitive red alga Cyanidioschyzon merolae. To be Published
3C60	Crystal structure of mouse MHC class II I-Ab/3K peptide complexed with mouse TCR YAe62 分子名称: 3K peptide, Linker, and H-2 class II histocompatibility antigen (A beta chain), ... 著者 Dai, S. 登録日 2008-02-01 公開日 2008-04-29 最終更新日 2021-10-20 実験手法 X-RAY DIFFRACTION (3.05 Å) 主引用文献 Crossreactive T Cells spotlight the germline rules for alphabeta T cell-receptor interactions with MHC molecules. Immunity, 28, 2008
3C62	Tetrameric Cytochrome cb562 (H59/D62/H63/H73/A74/H77) Assembly Stabilized by Interprotein Zinc Coordination 分子名称: CALCIUM ION, PROTOPORPHYRIN IX CONTAINING FE, Soluble cytochrome b562, ... 著者 Tezcan, F.A, Salgado, E.N, Lewis, R.A, Faraone-Mennella, J. 登録日 2008-02-02 公開日 2008-05-06 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (1.87 Å) 主引用文献 Metal-mediated self-assembly of protein superstructures: influence of secondary interactions on protein oligomerization and aggregation. J.Am.Chem.Soc., 130, 2008
3C66	Yeast poly(A) polymerase in complex with Fip1 residues 80-105 分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, GLYCEROL, Poly(A) polymerase, ... 著者 Bohm, A, Meinke, G. 登録日 2008-02-02 公開日 2008-05-20 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (2.6 Å) 主引用文献 Structure of yeast poly(A) polymerase in complex with a peptide from Fip1, an intrinsically disordered protein. Biochemistry, 47, 2008
3C7Q	Structure of VEGFR2 kinase domain in complex with BIBF1120 分子名称: SULFATE ION, Vascular endothelial growth factor receptor 2, methyl (3Z)-3-{[(4-{methyl[(4-methylpiperazin-1-yl)acetyl]amino}phenyl)amino](phenyl)methylidene}-2-oxo-2,3-dihydro-1H-indole-6-carboxylate 著者 Hilberg, F, Roth, G.J, Krssak, M, Kautschitsch, S, Sommergruber, W, Tontsch-Grunt, U, Garin-Chesa, P, Bader, G, Zoephel, A, Quant, J, Heckel, A, Rettig, W.J. 登録日 2008-02-08 公開日 2008-12-23 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 BIBF 1120: triple angiokinase inhibitor with sustained receptor blockade and good antitumor efficacy. Cancer Res., 68, 2008

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