PDB: 45118 件ウェブページステータス検索Chemie searchBIRD

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1NJ9	Cocaine hydrolytic antibody 15A10 分子名称: SODIUM ION, immunoglobulin heavy chain, immunoglobulin variable chain 著者 Larsen, N.A, de Prada, P, Deng, S.X, Zhu, X, Landry, D.W, Wilson, I.A. 登録日 2002-12-30 公開日 2004-02-17 最終更新日 2019-08-14 実験手法 X-RAY DIFFRACTION (2.35 Å) 主引用文献 Crystallographic and biochemical analysis of cocaine-degrading antibody 15A10. Biochemistry, 43, 2004
2JLN	Structure of Mhp1, a nucleobase-cation-symport-1 family transporter 分子名称: MERCURY (II) ION, MHP1, SODIUM ION 著者 Weyand, S, Shimamura, T, Yajima, S, Suzuki, S, Mirza, O, Krusong, K, Carpenter, E.P, Rutherford, N.G, Hadden, J.M, O'Reilly, J, Ma, P, Saidijam, M, Patching, S.G, Hope, R.J, Norbertczak, H.T, Roach, P.C.J, Iwata, S, Henderson, P.J.F, Cameron, A.D. 登録日 2008-09-11 公開日 2008-10-28 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (2.85 Å) 主引用文献 Structure and Molecular Mechanism of a Nucleobase-Cation-Symport-1 Family Transporter. Science, 322, 2008
4XUL	Crystal structure of M. chilensis Mg662 protein complexed with GTP 分子名称: GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, SODIUM ION, ... 著者 Lartigue, A, Priet, S, Claverie, J.M, Abergel, C. 登録日 2015-01-26 公開日 2016-02-03 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (2.26 Å) 主引用文献 Crystal structure of M. chilensis Mg662 protein complexed with GTP To Be Published
4XVK	Binary complex of human polymerase nu and DNA with the finger domain closed 分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, DNA (5'-D(*GP*AP*TP*CP*TP*GP*AP*CP*GP*CP*TP*AP*CP*GP*G)-3'), DNA (5'-D(*TP*CP*CP*GP*TP*AP*GP*CP*GP*TP*CP*A)-3'), ... 著者 Lee, Y.-S, Yang, W. 登録日 2015-01-27 公開日 2015-03-11 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (2.95 Å) 主引用文献 How a homolog of high-fidelity replicases conducts mutagenic DNA synthesis. Nat.Struct.Mol.Biol., 22, 2015
4XYM	Ca. Korarchaeum cryptofilum dinucleotide forming Acetyl-coenzyme A synthetase 1 in complex with coenzyme A, Ca-AMPCP and HgCl+ 分子名称: CALCIUM ION, CHLORIDE ION, COENZYME A, ... 著者 Weisse, R.H.-J, Scheidig, A.J. 登録日 2015-02-02 公開日 2016-01-27 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Structure of NDP-forming Acetyl-CoA synthetase ACD1 reveals a large rearrangement for phosphoryl transfer. Proc.Natl.Acad.Sci.USA, 113, 2016
1KEJ	Crystal Structure of Murine Terminal Deoxynucleotidyl Transferase complexed with ddATP 分子名称: 2',3'-DIDEOXYADENOSINE-5'-TRIPHOSPHATE, COBALT (II) ION, SODIUM ION, ... 著者 Delarue, M, Boule, J.B, Lescar, J, Expert-Bezancon, N, Jourdan, N, Sukumar, N, Rougeon, F, Papanicolaou, C. 登録日 2001-11-16 公開日 2002-05-16 最終更新日 2023-08-16 実験手法 X-RAY DIFFRACTION (3 Å) 主引用文献 Crystal structures of a template-independent DNA polymerase: murine terminal deoxynucleotidyltransferase. EMBO J., 21, 2002
1KFK	Crystal structure of Tryptophan Synthase From Salmonella Typhimurium 分子名称: PYRIDOXAL-5'-PHOSPHATE, SODIUM ION, TRYPTOPHAN SYNTHASE ALPHA CHAIN, ... 著者 Kulik, V, Weyand, M, Seidel, R, Niks, D, Arac, D, Dunn, M.F, Schlichting, I. 登録日 2001-11-21 公開日 2003-10-21 最終更新日 2011-07-13 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 On the role of alphaThr183 in the allosteric regulation and catalytic mechanism of tryptophan synthase. J.Mol.Biol., 324, 2002
6PLA	Adducts formed after 1 month in the reaction of dichlorido(1,3-dimethylbenzimidazol-2-ylidene)(eta6-p-cymene)osmium(II) with HEWL 分子名称: Lysozyme, OSMIUM ION, SODIUM ION, ... 著者 Sullivan, M.P, Hartinger, C.G, Goldstone, D.C. 登録日 2019-06-30 公開日 2020-11-25 最終更新日 2023-10-11 実験手法 X-RAY DIFFRACTION (1.25 Å) 主引用文献 Probing the Paradigm of Promiscuity for N-Heterocyclic Carbene Complexes and their Protein Adduct Formation. Angew.Chem.Int.Ed.Engl., 2021
4XJ5	Crystal structure of Vibrio cholerae DncV 3'-deoxy GTP bound form 分子名称: 1,2-ETHANEDIOL, 3'-DEOXY-GUANOSINE-5'-TRIPHOSPHATE, Cyclic AMP-GMP synthase, ... 著者 Kato, K, Ishii, R, Ishitani, R, Nureki, O. 登録日 2015-01-08 公開日 2015-04-29 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (1.552 Å) 主引用文献 Structural Basis for the Catalytic Mechanism of DncV, Bacterial Homolog of Cyclic GMP-AMP Synthase Structure, 23, 2015
6N6D	Vibrio cholerae Oligoribonuclease bound to pAG 分子名称: Oligoribonuclease, RNA (5'-R(P*AP*G)-3'), SODIUM ION 著者 Lormand, J.D, Sondermann, H. 登録日 2018-11-26 公開日 2019-06-12 最終更新日 2023-10-11 実験手法 X-RAY DIFFRACTION (1.534 Å) 主引用文献 A dedicated diribonucleotidase resolves a key bottleneck for the terminal step of RNA degradation. Elife, 8, 2019
4XKR	Crystal structure of NikA from Staphylococcus aureus in complex with Ni-(L-His)(2-methyl-thiazolidine dicarboxylate) (co-crystallization with Ni(II) and CDdeltaHis medium supernatant) 分子名称: (2R,4R)-2-methyl-1,3-thiazolidine-2,4-dicarboxylic acid, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, GLYCEROL, ... 著者 Lebrette, H, Cavazza, C. 登録日 2015-01-12 公開日 2015-02-11 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (1.75 Å) 主引用文献 Novel insights into nickel import in Staphylococcus aureus: the positive role of free histidine and structural characterization of a new thiazolidine-type nickel chelator. Metallomics, 7, 2015
4XKY	Structure of dihydrodipicolinate synthase from the commensal bacterium Bacteroides thetaiotaomicron at 2.1 A resolution 分子名称: ACETATE ION, Dihydrodipicolinate synthase, SODIUM ION 著者 Mank, N.J, Arnette, A.K, Klapper, V.G, Chruszcz, M. 登録日 2015-01-12 公開日 2015-04-01 最終更新日 2015-04-22 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Structure of dihydrodipicolinate synthase from the commensal bacterium Bacteroides thetaiotaomicron at 2.1 angstrom resolution. Acta Crystallogr.,Sect.F, 71, 2015
6MW7	Crystal structure of ATPase module of SMCHD1 bound to ATP 分子名称: ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, SODIUM ION, ... 著者 Pedersen, L.C, Inoue, K, Kim, S, Perera, L, Shaw, N.D. 登録日 2018-10-29 公開日 2019-09-11 最終更新日 2019-12-18 実験手法 X-RAY DIFFRACTION (2.194 Å) 主引用文献 A ubiquitin-like domain is required for stabilizing the N-terminal ATPase module of human SMCHD1. Commun Biol, 2, 2019
1UD8	Crystal structure of AmyK38 with lithium ion 分子名称: SODIUM ION, amylase 著者 Nonaka, T, Fujihashi, M, Kita, A, Hagihara, H, Ozaki, K, Ito, S, Miki, K. 登録日 2003-04-28 公開日 2003-07-22 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (2.88 Å) 主引用文献 Crystal structure of calcium-free alpha-amylase from Bacillus sp. strain KSM-K38 (AmyK38) and its sodium ion binding sites J.Biol.Chem., 278, 2003
6PD9	Crystal structure of MYST acetyltransferase domain in complex with inhibitor 60 分子名称: 2-fluoro-3-methyl-N'-(phenylsulfonyl)-5-(1H-pyrazol-1-yl)benzohydrazide, GLYCEROL, Histone acetyltransferase KAT8, ... 著者 Hermans, S.J, Parker, M.W, Thomas, T, Baell, J.B. 登録日 2019-06-18 公開日 2020-04-01 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 Discovery of Acylsulfonohydrazide-Derived Inhibitors of the Lysine Acetyltransferase, KAT6A, as Potent Senescence-Inducing Anti-Cancer Agents. J.Med.Chem., 63, 2020
6PDF	Crystal structure of MYST acetyltransferase domain in complex with inhibitor 55 分子名称: 2-fluoro-3-methyl-N'-(phenylsulfonyl)-5-(2H-1,2,3-triazol-2-yl)benzohydrazide, GLYCEROL, Histone acetyltransferase KAT8, ... 著者 Hermans, S.J, Parker, M.W, Thomas, T, Baell, J.B. 登録日 2019-06-18 公開日 2020-04-01 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (2.22 Å) 主引用文献 Discovery of Acylsulfonohydrazide-Derived Inhibitors of the Lysine Acetyltransferase, KAT6A, as Potent Senescence-Inducing Anti-Cancer Agents. J.Med.Chem., 63, 2020
2J6K	N-TERMINAL SH3 DOMAIN OF CMS (CD2AP HUMAN HOMOLOG) 分子名称: CD2-ASSOCIATED PROTEIN, SODIUM ION 著者 Moncalian, G, Cardenes, N, Deribe, Y.L, Spinola-Amilibia, M, Dikic, I, Bravo, J. 登録日 2006-09-29 公開日 2006-10-11 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (2.77 Å) 主引用文献 Atypical Polyproline Recognition by the Cms N- Terminal SH3 Domain. J.Biol.Chem., 281, 2006
6P9M	Crystal structure of Mycobacterium tuberculosis KasA in complex with O6J 分子名称: 3-oxoacyl-[acyl-carrier-protein] synthase 1, GLYCEROL, ISOPROPYL ALCOHOL, ... 著者 Capodagli, G.C, Neiditch, M.B. 登録日 2019-06-10 公開日 2020-04-01 最終更新日 2023-10-11 実験手法 X-RAY DIFFRACTION (2.256 Å) 主引用文献 A Preclinical Candidate Targeting Mycobacterium tuberculosis KasA. Cell Chem Biol, 27, 2020
4XWI	X-ray Crystal structure of CMP-KDO Synthase from Pseudomonas aeruginosa 分子名称: 3-deoxy-manno-octulosonate cytidylyltransferase, SODIUM ION, SULFATE ION 著者 Seattle Structural Genomics Center for Infectious Disease (SSGCID) 登録日 2015-01-28 公開日 2015-04-29 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (1.92 Å) 主引用文献 X-ray Crystal structure of CMP-KDO Synthase from Pseudomonas aeruginosa to be published
6PD8	Crystal structure of MYST acetyltransferase domain in complex with inhibitor 39 分子名称: 5-ethoxy-2-fluoro-3-methyl-N'-(phenylsulfonyl)benzohydrazide, GLYCEROL, Histone acetyltransferase KAT8, ... 著者 Hermans, S.J, Parker, M.W, Thomas, T, Baell, J.B. 登録日 2019-06-18 公開日 2020-04-01 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (2.738 Å) 主引用文献 Discovery of Acylsulfonohydrazide-Derived Inhibitors of the Lysine Acetyltransferase, KAT6A, as Potent Senescence-Inducing Anti-Cancer Agents. J.Med.Chem., 63, 2020
6PDC	Crystal structure of MYST acetyltransferase domain in complex with inhibitor 42 分子名称: 2-fluoro-3-methyl-N'-(phenylsulfonyl)-5-[(prop-2-en-1-yl)oxy]benzohydrazide, GLYCEROL, Histone acetyltransferase KAT8, ... 著者 Hermans, S.J, Parker, M.W, Thomas, T, Baell, J.B. 登録日 2019-06-18 公開日 2020-04-01 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (1.96 Å) 主引用文献 Discovery of Acylsulfonohydrazide-Derived Inhibitors of the Lysine Acetyltransferase, KAT6A, as Potent Senescence-Inducing Anti-Cancer Agents. J.Med.Chem., 63, 2020
4XON	Tailspike protein double mutant D339N/E372Q of E. coli bacteriophage HK620 分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, FORMIC ACID, SODIUM ION, ... 著者 Gohlke, U, Broeker, N.K, Heinemann, U, Seckler, R, Barbirz, S. 登録日 2015-01-16 公開日 2016-01-27 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Enthalpic cost of water removal from a hydrophobic glucose binding cavity on HK620 tailspike protein. to be published
6PLB	Adducts formed after 1 month in the reaction of dichlorido(1,3-dimethylbenzimida zol-2-ylidene)(eta5-pentamethylcyclopentadienyl)iridium(III) with HEWL 分子名称: 2-(1-chloranyl-2,3,4,5,6-pentamethyl-1$l^{7}-iridapentacyclo[2.2.0.0^{1,3}.0^{1,5}.0^{2,6}]hexan-1-yl)-1,3-dimethyl-benzimidazole, Lysozyme, SODIUM ION 著者 Sullivan, M.P, Hartinger, C.G, Goldstone, D.C. 登録日 2019-06-30 公開日 2020-11-25 最終更新日 2023-10-11 実験手法 X-RAY DIFFRACTION (1.3 Å) 主引用文献 Probing the Paradigm of Promiscuity for N-Heterocyclic Carbene Complexes and their Protein Adduct Formation. Angew.Chem.Int.Ed.Engl., 2021
6PLJ	A nucleotidyl transferase from Methanothermobacter thermautotroptrophicus (Mth528) 分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, SODIUM ION, ... 著者 Carbone, V, Schofield, L, Sutherland-Smith, A, Ronimus, R. 登録日 2019-07-01 公開日 2020-07-08 最終更新日 2023-10-11 実験手法 X-RAY DIFFRACTION (1.59 Å) 主引用文献 A nucleotidyl transferase from Methanothermobacter thermautotroptrophicus (Mth528) To Be Published
6PNK	Crystal structure of the G-quadruplex formed by (GGGTT)3GGG in complex with N-methylmesoporphryin IX 分子名称: DNA (5'-D(P*GP*GP*GP*TP*TP*GP*GP*GP*TP*TP*GP*GP*GP*TP*TP*GP*GP*G)-3'), FORMIC ACID, N-METHYLMESOPORPHYRIN, ... 著者 Yatsunyk, L.A, Lin, L.Y. 登録日 2019-07-02 公開日 2020-07-08 最終更新日 2023-10-11 実験手法 X-RAY DIFFRACTION (2.39 Å) 主引用文献 Biophysical and X-ray structural studies of the (GGGTT)3GGG G-quadruplex in complex with N-methyl mesoporphyrin IX. Plos One, 15, 2020

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