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8IJO
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BU of 8ijo by Molmil
Structure of DNA binding domain of McrBC endonuclease bound to DNA: Y41F-L68F double mutant
分子名称: 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, DNA (5'-D(*GP*AP*GP*AP*CP*CP*GP*GP*TP*AP*GP*C)-3'), DNA (5'-D(*GP*CP*TP*AP*CP*CP*GP*GP*TP*CP*TP*C)-3'), ...
著者Adhav, V.A, Saikrishnan, K.
登録日2023-02-27
公開日2024-02-28
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Structural basis of target recognition by the DNA binding domain of McrBC
To Be Published
6KCT
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BU of 6kct by Molmil
Crystal structure of plasmodium lysyl-tRNA synthetase in complex with a cladosporin derivative 5
分子名称: 3-(cyclohexylmethyl)-6,8-bis(oxidanyl)isochromen-1-one, LYSINE, Lysine--tRNA ligase
著者Zhou, J, Fang, P.
登録日2019-06-29
公開日2020-04-08
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (3.25 Å)
主引用文献Atomic Resolution Analyses of Isocoumarin Derivatives for Inhibition of Lysyl-tRNA Synthetase.
Acs Chem.Biol., 15, 2020
5GU1
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BU of 5gu1 by Molmil
Crystal structure of Au(L).CL-apo-E45C/R52C-rHLFr
分子名称: 1,2-ETHANEDIOL, CADMIUM ION, Ferritin light chain, ...
著者Maity, B, Abe, S, Ueno, T.
登録日2016-08-24
公開日2017-03-29
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Observation of gold sub-nanocluster nucleation within a crystalline protein cage
Nat Commun, 8, 2017
6EKN
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BU of 6ekn by Molmil
Crystal structure of MMP12 in complex with inhibitor BE7.
分子名称: (2~{S})-2-[2-[4-(4-methoxyphenyl)phenyl]sulfonylphenyl]pentanedioic acid, 1,2-ETHANEDIOL, CALCIUM ION, ...
著者Ciccone, L, Tepshi, L, Nuti, E, Rossello, A, Stura, E.A.
登録日2017-09-26
公開日2018-05-16
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.2 Å)
主引用文献Development of Thioaryl-Based Matrix Metalloproteinase-12 Inhibitors with Alternative Zinc-Binding Groups: Synthesis, Potentiometric, NMR, and Crystallographic Studies.
J. Med. Chem., 61, 2018
5DNU
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BU of 5dnu by Molmil
Crystal structure of Striga KAI2-like protein in complex with karrikin
分子名称: 1,2-ETHANEDIOL, 3-methyl-2H-furo[2,3-c]pyran-2-one, BENZOIC ACID, ...
著者Xu, Y, Miyakawa, T, Nakamura, A, Tanokura, M.
登録日2015-09-10
公開日2016-08-17
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.2 Å)
主引用文献Structural basis of unique ligand specificity of KAI2-like protein from parasitic weed Striga hermonthica
Sci Rep, 6, 2016
5MKF
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BU of 5mkf by Molmil
cryoEM Structure of Polycystin-2 in complex with calcium and lipids
分子名称: 1,2-DIPALMITOYL-SN-GLYCERO-3-PHOSPHATE, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Wilkes, M, Madej, M.G, Ziegler, C.
登録日2016-12-04
公開日2017-01-18
最終更新日2025-07-02
実験手法ELECTRON MICROSCOPY (4.2 Å)
主引用文献Molecular insights into lipid-assisted Ca(2+) regulation of the TRP channel Polycystin-2.
Nat. Struct. Mol. Biol., 24, 2017
9YDV
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BU of 9ydv by Molmil
MRS2905 bound P2Y14 Receptor in complex with Gi
分子名称: 1-{5-O-[(R)-hydroxy(phosphonomethyl)phosphoryl]-beta-D-ribofuranosyl}-2-sulfanylidene-2,3-dihydropyrimidin-4(1H)-one, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, ...
著者Fay, J.F.
登録日2025-09-23
公開日2025-11-19
実験手法ELECTRON MICROSCOPY (3.05 Å)
主引用文献UDP-glucose and MRS2905 agonist-bound states of the purinergic P2Y14 receptor
Commun Biol, 2025
8IK4
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BU of 8ik4 by Molmil
Structure of DNA binding domain of McrBC endonuclease bound to hemimethylated DNA: L68F mutant
分子名称: 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, DNA (5'-D(*AP*GP*AP*(5CM)P*CP*GP*GP*TP*AP*G)-3'), DNA (5'-D(*CP*TP*AP*CP*CP*GP*GP*TP*CP*T)-3'), ...
著者Adhav, V.A, Saikrishnan, K.
登録日2023-02-28
公開日2024-02-28
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structural basis of target recognition by the DNA binding domain of McrBC
To Be Published
8W9A
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BU of 8w9a by Molmil
CryoEM structure of human PI3K-alpha (P85/P110-H1047R) with QR-7909 binding at an allosteric site
分子名称: 6-chloranyl-3-[[(1R)-1-[2-(1,3-dihydropyrrolo[3,4-c]pyridin-2-yl)-3,6-dimethyl-4-oxidanylidene-quinazolin-8-yl]ethyl]amino]pyridine-2-carboxylic acid, Phosphatidylinositol 3-kinase regulatory subunit alpha, Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit alpha isoform
著者Huang, X, Ren, X, Zhong, W.
登録日2023-09-05
公開日2024-04-17
最終更新日2024-07-24
実験手法ELECTRON MICROSCOPY (2.7 Å)
主引用文献Cryo-EM structures reveal two allosteric inhibition modes of PI3K alpha H1047R involving a re-shaping of the activation loop.
Structure, 32, 2024
6YI5
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BU of 6yi5 by Molmil
In-situ structure of the trimeric HEF from influenza C by flexible fitting into a cryo-ET map.
分子名称: Hemagglutinin-esterase-fusion glycoprotein, beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-alpha-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
著者Halldorsson, S, Rosenthal, P.B.
登録日2020-03-31
公開日2021-03-24
最終更新日2024-10-16
実験手法ELECTRON MICROSCOPY (9.1 Å)
主引用文献In situ structure and organization of the influenza C virus surface glycoprotein.
Nat Commun, 12, 2021
6H6X
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BU of 6h6x by Molmil
Structure of an evolved dimeric form of the UbiD-class enzyme HmfF from Pelotomaculum thermopropionicum in complex with prFMN
分子名称: 1-deoxy-5-O-phosphono-1-(3,3,4,5-tetramethyl-9,11-dioxo-2,3,8,9,10,11-hexahydro-7H-quinolino[1,8-fg]pteridin-12-ium-7-y l)-D-ribitol, 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases, CALCIUM ION, ...
著者Payne, K.A.P, Leys, D.
登録日2018-07-30
公開日2019-02-27
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Enzymatic Carboxylation of 2-Furoic Acid Yields 2,5-Furandicarboxylic Acid (FDCA).
Acs Catalysis, 9, 2019
7TQG
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BU of 7tqg by Molmil
Crystal Structure of IOMA Fab inferred germline
分子名称: IOMA iGL Fab Heavy Chain, IOMA iGL Fab Light Chain
著者Gristick, H.B, Bjorkman, P.J.
登録日2022-01-26
公開日2023-03-01
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (2.07 Å)
主引用文献CD4 binding site immunogens elicit heterologous anti-HIV-1 neutralizing antibodies in transgenic and wild-type animals.
Sci Immunol, 8, 2023
8IJP
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BU of 8ijp by Molmil
Structure of DNA binding domain of McrBC endonuclease bound to DNA: L68Y mutant
分子名称: 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, DNA (5'-D(*GP*AP*GP*AP*CP*CP*GP*GP*TP*AP*GP*C)-3'), DNA (5'-D(*GP*CP*TP*AP*CP*CP*GP*GP*TP*CP*TP*C)-3'), ...
著者Adhav, V.A, Saikrishnan, K.
登録日2023-02-27
公開日2024-02-28
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Structural basis of target recognition by the DNA binding domain of McrBC
To Be Published
6KFZ
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BU of 6kfz by Molmil
SufS from Bacillus subtilis, soaked with L-cysteine for 90 sec at 1.96 angstrom resolution
分子名称: Cysteine desulfurase SufS, DI(HYDROXYETHYL)ETHER, N-({3-HYDROXY-2-METHYL-5-[(PHOSPHONOOXY)METHYL]PYRIDIN-4-YL}METHYL)-L-CYSTEINE
著者Nakamura, R, Takahashi, Y, Fujishiro, T.
登録日2019-07-09
公開日2019-10-16
最終更新日2024-11-13
実験手法X-RAY DIFFRACTION (1.96 Å)
主引用文献Snapshots of PLP-substrate and PLP-product external aldimines as intermediates in two types of cysteine desulfurase enzymes.
Febs J., 287, 2020
5JZK
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BU of 5jzk by Molmil
The Structure of Ultra Stable Green Fluorescent Protein
分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, GLYCEROL, ...
著者Yong, K.J, Gunn, N.J, Scott, D.J, Griffin, M.D.W.
登録日2016-05-17
公開日2017-12-06
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献A Novel Ultra-Stable, Monomeric Green Fluorescent Protein For Direct Volumetric Imaging of Whole Organs Using CLARITY.
Sci Rep, 8, 2018
5DTF
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BU of 5dtf by Molmil
context-independent anti-hypusine antibody FabHpu98.61 in complex with hypusine
分子名称: 1,2-ETHANEDIOL, Fab Hpu98.61 Heavy Chain, Fab Hpu98.61 Light Chain, ...
著者Zhai, Q, Carter, P.J.
登録日2015-09-18
公開日2016-02-17
最終更新日2024-11-06
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structural Analysis and Optimization of Context-Independent Anti-Hypusine Antibodies.
J.Mol.Biol., 428, 2016
8IKD
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BU of 8ikd by Molmil
Structure of DNA binding domain of McrBC endonuclease bound to DNA: Y41F-L68Y double mutant
分子名称: 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, DNA (5'-D(*GP*AP*GP*AP*CP*CP*GP*GP*TP*AP*GP*C)-3'), DNA (5'-D(*GP*CP*TP*AP*CP*CP*GP*GP*TP*CP*TP*C)-3'), ...
著者Adhav, V.A, Saikrishnan, K.
登録日2023-02-28
公開日2024-02-28
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structural basis of target recognition by the DNA binding domain of McrBC
To Be Published
7U4C
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BU of 7u4c by Molmil
Borrelia burgdorferi HtpG N-terminal domain (1-228) in complex with BX-2819
分子名称: Chaperone protein HtpG, ethyl (4-{3-[2,4-dihydroxy-5-(1-methylethyl)phenyl]-5-sulfanyl-4H-1,2,4-triazol-4-yl}benzyl)carbamate
著者Kowalewski, M.E, Lietzan, A, Haystead, T, Redinbo, M.R.
登録日2022-02-28
公開日2023-03-08
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.28 Å)
主引用文献Targeting Borrelia burgdorferi HtpG with a berserker molecule, a strategy for anti-microbial development.
Cell Chem Biol, 2023
8IK8
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BU of 8ik8 by Molmil
Structure of DNA binding domain of McrBC endonuclease bound to DNA: L68F mutant
分子名称: 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, DNA (5'-D(*GP*AP*GP*AP*CP*CP*GP*GP*TP*AP*GP*C)-3'), DNA (5'-D(*GP*CP*TP*AP*CP*CP*GP*GP*TP*CP*TP*C)-3'), ...
著者Adhav, V.A, Saikrishnan, K.
登録日2023-02-28
公開日2024-02-28
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structural basis of target recognition by the DNA binding domain of McrBC
To Be Published
4ZAU
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BU of 4zau by Molmil
AZD9291 complex with wild type EGFR
分子名称: Epidermal growth factor receptor, N-(2-{[2-(dimethylamino)ethyl](methyl)amino}-4-methoxy-5-{[4-(1-methyl-1H-indol-3-yl)pyrimidin-2-yl]amino}phenyl)prop-2-enamide
著者Squire, C.J, Yosaatmadja, Y, Flanagan, J.U, McKeage, M.
登録日2015-04-14
公開日2015-11-11
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Binding mode of the breakthrough inhibitor AZD9291 to epidermal growth factor receptor revealed.
J.Struct.Biol., 192, 2015
5XWX
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BU of 5xwx by Molmil
Crystal structure of the four N-terminal immunoglogulin domains of Sidekick-1 protein
分子名称: Protein sidekick-1
著者Tang, H, Dong, Y, He, Y.
登録日2017-06-30
公開日2018-08-29
最終更新日2024-11-13
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Architecture of cell-cell adhesion mediated by sidekicks.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
7Y8V
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BU of 7y8v by Molmil
Crystal structure of AlbEF homolog mutant (AlbF-H54A/H58A) from Quasibacillus thermotolerans
分子名称: 1,2-ETHANEDIOL, AlbE homolog, AlbF homolog H54A/H58A mutant, ...
著者Ishida, K, Nakamura, A, Kojima, S.
登録日2022-06-24
公開日2022-10-12
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal structure of the AlbEF complex involved in subtilosin A biosynthesis.
Structure, 30, 2022
7BLT
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BU of 7blt by Molmil
Notum_Maybridge_4
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 3-(4-~{tert}-butylphenyl)-1,2,4-oxadiazole-5-carbohydrazide, Palmitoleoyl-protein carboxylesterase NOTUM, ...
著者Zhao, Y, Jones, E.Y.
登録日2021-01-19
公開日2022-03-02
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (1.2 Å)
主引用文献Notum Inhibitor
To Be Published
8ROY
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BU of 8roy by Molmil
Structure of the human DDB1-DDA1-DCAF15 E3 ubiquitin ligase bound to compound furan 24
分子名称: 1-[5-[[3,4-bis(chloranyl)-1~{H}-indol-7-yl]sulfamoyl]-3-methyl-furan-2-yl]carbonyl-~{N}-methyl-piperidine-4-carboxamide, DDB1- and CUL4-associated factor 15, DET1- and DDB1-associated protein 1, ...
著者Shilliday, F, Lucas, S.C.C, Richter, M, Michaelides, I.N, Fusani, L.
登録日2024-01-12
公開日2024-04-03
最終更新日2024-10-23
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献Optimization of Potent Ligands for the E3 Ligase DCAF15 and Evaluation of Their Use in Heterobifunctional Degraders.
J.Med.Chem., 67, 2024
9G35
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BU of 9g35 by Molmil
The HIV protease inhibitor lopinavir binding to the active site of Cryphonectria parasitica endothiapepsin
分子名称: 1,2-ETHANEDIOL, Endothiapepsin, N-{1-BENZYL-4-[2-(2,6-DIMETHYL-PHENOXY)-ACETYLAMINO]-3-HYDROXY-5-PHENYL-PENTYL}-3-METHYL-2-(2-OXO-TETRAHYDRO-PYRIMIDIN-1-YL)-BUTYRAMIDE, ...
著者Falke, S, Senst, J.M, Guenther, S, Meents, A.
登録日2024-07-11
公開日2024-07-24
最終更新日2024-11-13
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献The HIV protease inhibitor lopinavir binding to the active site of Cryphonectria parasitica endothiapepsin
To Be Published

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件を2025-11-19に公開中

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