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3LEF
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BU of 3lef by Molmil
Crystal structure of HIV epitope-scaffold 4E10_S0_1Z6NA_001
分子名称: 1,2-ETHANEDIOL, Uncharacterized protein 4E10_S0_1Z6NA_001 (T18)
著者Holmes, M.A.
登録日2010-01-14
公開日2010-09-22
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Computational Design of Epitope-Scaffolds Allows Induction of Antibodies Specific for a Poorly Immunogenic HIV Vaccine Epitope.
Structure, 18, 2010
1P83
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BU of 1p83 by Molmil
NMR STRUCTURE OF 1-25 FRAGMENT OF MYCOBACTERIUM TUBERCULOSIS CPN10
分子名称: 10 kDa chaperonin
著者Ciutti, A, Spiga, O, Giannozzi, E, Scarselli, M, Di Maro, D, Calamandrei, D, Niccolai, N, Bernini, A.
登録日2003-05-06
公開日2003-05-27
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Solution Structure of 1-25 fragment of Cpn10 from Mycobacterium Tuberculosis
To be Published
2HGO
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BU of 2hgo by Molmil
NMR structure of Cassiicolin
分子名称: 1,5-anhydro-3-O-methyl-D-mannitol, CASSIICOLIN
著者Barthe, P, Pujade-Renault, V, Roumestand, C, de Lamotte, F.
登録日2006-06-27
公開日2007-02-27
最終更新日2024-11-06
実験手法SOLUTION NMR
主引用文献Structural Analysis of Cassiicolin, a Host-selective Protein Toxin from Corynespora cassiicola
J.Mol.Biol., 367, 2007
5ZL1
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BU of 5zl1 by Molmil
Hexameric structure of copper-containing nitrite reductase of an anammox organism KSU-1
分子名称: CALCIUM ION, COPPER (II) ION, Putative copper-type nitrite reductase, ...
著者Hira, D, Matsumura, M, Kitamura, R, Fujii, T.
登録日2018-03-26
公開日2019-04-10
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Hexameric structure of copper-containing nitrite reductase of an anammox organism KSU-1
To Be Published
6D56
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BU of 6d56 by Molmil
Ras:SOS:Ras in complex with a small molecule activator
分子名称: 6-chloro-2-(2,6-diazaspiro[3.3]heptan-2-yl)-4-(3,5-dimethyl-1H-pyrazol-4-yl)-1-[(4-fluoro-3,5-dimethylphenyl)methyl]-1H-benzimidazole, FORMIC ACID, GLYCEROL, ...
著者Phan, J, Hodges, T, Fesik, S.W.
登録日2018-04-19
公開日2018-09-19
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (1.68 Å)
主引用文献Discovery and Structure-Based Optimization of Benzimidazole-Derived Activators of SOS1-Mediated Nucleotide Exchange on RAS.
J. Med. Chem., 61, 2018
6SW8
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BU of 6sw8 by Molmil
Crystal structure of the NS1 (H7N1) RNA-binding domain
分子名称: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, Non-structural protein 1
著者Coste, F, Wacquiez, A, Marc, D, Castaing, B.
登録日2019-09-20
公開日2020-10-07
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.933 Å)
主引用文献Structure and Sequence Determinants Governing the Interactions of RNAs with Influenza A Virus Non-Structural Protein NS1.
Viruses, 12, 2020
7FD4
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BU of 7fd4 by Molmil
A complete three-dimensional structure of the Lon protease translocating a protein substrate (conformation 1)
分子名称: ADENOSINE-5'-DIPHOSPHATE, Alpha-S1-casein, Lon protease, ...
著者Li, S, Hsieh, K, Kuo, C, Lee, S, Pintilie, G, Zhang, K, Chang, C.
登録日2021-07-16
公開日2021-11-03
最終更新日2024-11-13
実験手法ELECTRON MICROSCOPY (2.4 Å)
主引用文献Complete three-dimensional structures of the Lon protease translocating a protein substrate.
Sci Adv, 7, 2021
5WZM
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BU of 5wzm by Molmil
Crystal structure of human secreted phospholipase A2 group IIE
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CALCIUM ION, CHLORIDE ION, ...
著者Hou, S, Xu, J, Xu, T, Liu, J.
登録日2017-01-18
公開日2018-01-24
最終更新日2024-11-13
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structural basis for functional selectivity and ligand recognition revealed by crystal structures of human secreted phospholipase A2 group IIE
Sci Rep, 7, 2017
9OMG
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BU of 9omg by Molmil
Cryo-EM structure of rhesus antibody V033-a.I1 in complex with HIV Env trimer Q23.17 MD39
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, HIV Env gp120, ...
著者Roark, R.S, Shapiro, L, Kwong, P.D.
登録日2025-05-13
公開日2025-11-05
実験手法ELECTRON MICROSCOPY (3.6 Å)
主引用文献Env-antibody coevolution identifies B cell priming as the principal bottleneck to HIV-1 V2 apex broadly neutralizing antibody development
To Be Published
9CF9
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BU of 9cf9 by Molmil
SARS-CoV-2 3CL Protease complexed with covalent inhibitor BC787
分子名称: 3C-like proteinase nsp5, N-[(2S)-1-{[(2S)-1-hydroxy-3-(pyridin-3-yl)propan-2-yl]amino}-4-methyl-1-oxopentan-2-yl]-4-methoxy-1H-indole-2-carboxamide
著者Hoffpauir, Z.A, Meneely, K.M, Lamb, A.L.
登録日2024-06-27
公開日2025-01-15
最終更新日2025-01-22
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Dual Inhibitors of SARS-CoV-2 3CL Protease and Human Cathepsin L Containing Glutamine Isosteres Are Anti-CoV-2 Agents.
J.Am.Chem.Soc., 147, 2025
7T8R
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BU of 7t8r by Molmil
Co-crystal structure of SARS-CoV-2 Mpro C145A with substrate peptide 7/8
分子名称: 1,2-ETHANEDIOL, 3C-like proteinase, GLYCEROL, ...
著者Shaqra, A.M, Schiffer, C.A.
登録日2021-12-16
公開日2022-06-22
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.74 Å)
主引用文献Defining the substrate envelope of SARS-CoV-2 main protease to predict and avoid drug resistance.
Nat Commun, 13, 2022
9QRS
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BU of 9qrs by Molmil
Crystal structure of CERK6 extracellular domain
分子名称: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Cheng, J.X.J, Gysel, K, Stougaard, J, Andersen, K.R.
登録日2025-04-04
公開日2025-07-16
実験手法X-RAY DIFFRACTION (1.87 Å)
主引用文献Structural basis for size-selective perception of chitin in plants
To Be Published
6GA6
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BU of 6ga6 by Molmil
Bacteriorhodopsin, 10 ps state, real-space refined against 10% extrapolated map
分子名称: 2,3-DI-PHYTANYL-GLYCEROL, Bacteriorhodopsin, DECANE, ...
著者Nass Kovacs, G, Colletier, J.-P, Gruenbein, M.L, Stensitzki, T, Batyuk, A, Carbajo, S, Doak, R.B, Ehrenberg, D, Foucar, L, Gasper, R, Gorel, A, Hilpert, M, Kloos, M, Koglin, J, Reinstein, J, Roome, C.M, Schlesinger, R, Seaberg, M, Shoeman, R.L, Stricker, M, Boutet, S, Haacke, S, Heberle, J, Domratcheva, T, Schlichting, I.
登録日2018-04-11
公開日2019-04-24
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Three-dimensional view of ultrafast dynamics in photoexcited bacteriorhodopsin.
Nat Commun, 10, 2019
9IZC
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BU of 9izc by Molmil
Cryo-EM structure of human HCAR2-Gi complex with MK1903
分子名称: (4aR,5aR)-4,4a,5,5a-tetrahydro-1H-cyclopropa[4,5]cyclopenta[1,2-c]pyrazole-3-carboxylic acid, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, ...
著者Xin, P, Fang, Y.
登録日2024-08-01
公開日2025-04-02
最終更新日2025-10-22
実験手法ELECTRON MICROSCOPY (2.68 Å)
主引用文献Structures of G-protein coupled receptor HCAR1 in complex with Gi1 protein reveal the mechanistic basis for ligand recognition and agonist selectivity.
Plos Biol., 23, 2025
5ISA
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BU of 5isa by Molmil
Crystal structure of mouse CARM1 in complex with inhibitor SA0401
分子名称: (2~{S})-4-[[(2~{R},3~{S},4~{R},5~{R})-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methyl-(3-azidopropyl)amino]-2-azanyl-butanoic acid, 1,2-DIMETHOXYETHANE, 1,2-ETHANEDIOL, ...
著者Cura, V, Marechal, N, Mailliot, J, Troffer-Charlier, N, Hassenboehler, P, Wurtz, J.M, Bonnefond, L, Cavarelli, J.
登録日2016-03-15
公開日2017-03-15
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Crystal structure of mouse CARM1 in complex with inhibitor SA0401
To Be Published
5X26
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BU of 5x26 by Molmil
Crystal structure of EGFR 696-1022 L858R in complex with SKLB(3)
分子名称: CHLORIDE ION, Epidermal growth factor receptor, N2-[4-(4-methylpiperazin-1-yl)phenyl]-N8-phenyl-9-propan-2-yl-purine-2,8-diamine
著者Yun, C.H.
登録日2017-01-31
公開日2018-02-07
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.951 Å)
主引用文献Structural insights into drug development strategy targeting EGFR T790M/C797S.
Oncotarget, 9, 2018
5G0I
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BU of 5g0i by Molmil
Crystal structure of Danio rerio HDAC6 CD1 and CD2 (linker cleaved) in complex with Nexturastat A
分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, HDAC6, ...
著者Miyake, Y, Keusch, J.J, Wang, L, Saito, M, Hess, D, Wang, X, Melancon, B.J, Helquist, P, Gut, H, Matthias, P.
登録日2016-03-18
公開日2016-07-27
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.99 Å)
主引用文献Structural Insights Into Hdac6 Tubulin Deacetylation and its Selective Inhibition
Nat.Chem.Biol., 12, 2016
5FO5
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BU of 5fo5 by Molmil
Structure of the DNA-binding domain of Escherichia coli methionine biosynthesis regulator MetR
分子名称: 1,2-ETHANEDIOL, HTH-TYPE TRANSCRIPTIONAL REGULATOR METR, MAGNESIUM ION
著者Punekar, A.S, Porter, J, Urbanowski, M.L, Stauffer, G.V, Carr, S.B, Phillips, S.E.
登録日2015-11-18
公開日2016-06-08
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.16 Å)
主引用文献Structural Basis for DNA Recognition by the Transcription Regulator Metr.
Acta Crystallogr.,Sect.F, 72, 2016
5LYF
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BU of 5lyf by Molmil
Crystal structure of 1 in complex with tafCPB
分子名称: (2~{S})-6-azanyl-2-[[(2~{R})-1-[[(1~{R},2~{S},4~{S})-2-bicyclo[2.2.1]heptanyl]amino]-3-cyclohexyl-1-oxidanylidene-propan-2-yl]carbamoylamino]hexanoic acid, Carboxypeptidase B, ZINC ION
著者Schreuder, H, Liesum, A, Loenze, P.
登録日2016-09-28
公開日2016-10-26
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (2.01 Å)
主引用文献Sulfamide as Zinc Binding Motif in Small Molecule Inhibitors of Activated Thrombin Activatable Fibrinolysis Inhibitor (TAFIa).
J. Med. Chem., 59, 2016
9O2T
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BU of 9o2t by Molmil
BG505-DS SOSIP in complex with 007 bNAb Fabs - Class 3 (3 Fabs bound)
分子名称: 007 Fab Heavy Chain, 007 Light Chain, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者DeLaitsch, A.T, Bjorkman, P.J.
登録日2025-04-04
公開日2025-10-01
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Identification of a broad and potent V3 glycan site bNAb targeting an N332 gp120 glycan-independent epitope.
Biorxiv, 2025
5FPU
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BU of 5fpu by Molmil
Crystal structure of human JARID1B in complex with GSKJ1
分子名称: 1,2-ETHANEDIOL, 3-[[2-pyridin-2-yl-6-(1,2,4,5-tetrahydro-3-benzazepin-3-yl)pyrimidin-4-yl]amino]propanoic acid, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ...
著者Srikannathasan, V, Nowak, R, Johansson, C, Gileadi, C, von Delft, F, Arrowsmith, C.H, Bountra, C, Edwards, A, Oppermann, U.
登録日2015-12-03
公開日2016-01-13
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.24 Å)
主引用文献Structural Analysis of Human Kdm5B Guides Histone Demethylase Inhibitor Development.
Nat.Chem.Biol., 12, 2016
9O2U
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BU of 9o2u by Molmil
BG505 SOSIP in complex with 007 bNAb IgG1 - trimer-dimer class
分子名称: 007 IgG1 Heavy Chain, 007 Light Chain, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者DeLaitsch, A.T, Bjorkman, P.J.
登録日2025-04-04
公開日2025-10-01
実験手法ELECTRON MICROSCOPY (4.2 Å)
主引用文献Identification of a broad and potent V3 glycan site bNAb targeting an N332 gp120 glycan-independent epitope.
Biorxiv, 2025
4YK0
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BU of 4yk0 by Molmil
Crystal structure of the CBP bromodomain in complex with CPI098
分子名称: (4R)-4-methyl-1,3,4,5-tetrahydro-2H-1,5-benzodiazepin-2-one, 1,2-ETHANEDIOL, CREB-binding protein
著者Bellon, S.F, Jayaram, H.
登録日2015-03-03
公開日2016-04-20
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Regulatory T Cell Modulation by CBP/EP300 Bromodomain Inhibition.
J.Biol.Chem., 291, 2016
7WOP
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BU of 7wop by Molmil
The local refined map of Omicron spike with bispecific antibody FD01
分子名称: 16L9, GW01, Spike protein S1
著者Zhang, X, Zhan, W.Q, Chen, Z.G, Sun, L.
登録日2022-01-22
公開日2022-11-30
最終更新日2025-07-02
実験手法ELECTRON MICROSCOPY (3.51 Å)
主引用文献Combating the SARS-CoV-2 Omicron (BA.1) and BA.2 with potent bispecific antibodies engineered from non-Omicron neutralizing antibodies
Cell Discov, 8, 2022
8A32
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BU of 8a32 by Molmil
p53 cancer mutant Y220C in complex with iodophenol-based small-molecule stabilizer JC769
分子名称: 1,2-ETHANEDIOL, 4-[3,4-bis(fluoranyl)pyrrol-1-yl]-3,5-bis(iodanyl)-2-oxidanyl-benzoic acid, Cellular tumor antigen p53, ...
著者Balourdas, D.I, Stephenson Clarke, J.R, Baud, M.G.J, Knapp, S, Joerger, A.C, Structural Genomics Consortium (SGC)
登録日2022-06-06
公開日2022-11-30
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.47 Å)
主引用文献Discovery of Nanomolar-Affinity Pharmacological Chaperones Stabilizing the Oncogenic p53 Mutant Y220C.
Acs Pharmacol Transl Sci, 5, 2022

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