PDB: 216395 件ウェブページステータス検索Chemie searchBIRD

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8K6Y	Serial femtosecond crystallography structure of photo dissociated CO from ba3- type cytochrome c oxidase determined by extrapolation method 分子名称: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, CARBON MONOXIDE, COPPER (II) ION, ... 著者 Safari, C, Ghosh, S, Andersson, R, Johannesson, J, Donoso, A.V, Zoric, D, Sandelin, E, Iwata, S, Neutze, R, Branden, G. 登録日 2023-07-25 公開日 2023-11-15 最終更新日 2024-03-20 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Time-resolved serial crystallography to track the dynamics of carbon monoxide in the active site of cytochrome c oxidase. Sci Adv, 9, 2023
8K65	Serial femtosecond crystallography structure of CO bound ba3- type cytochrome c oxidase without pump laser irradiation 分子名称: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, CARBON MONOXIDE, COPPER (II) ION, ... 著者 Safari, C, Ghosh, S, Andersson, R, Johannesson, J, Donoso, A.V, Bath, P, Zoric, D, Sandelin, E, Nango, E, Tanaka, R, Iwata, S, Neutze, R, Branden, G. 登録日 2023-07-25 公開日 2023-11-15 最終更新日 2024-03-20 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Time-resolved serial crystallography to track the dynamics of carbon monoxide in the active site of cytochrome c oxidase. Sci Adv, 9, 2023
7SYW	Structure of the wt IRES eIF5B-containing 48S initiation complex, closed conformation. Structure 15(wt) 分子名称: 18S rRNA, 40S ribosomal protein S2, 40S ribosomal protein S21, ... 著者 Brown, Z.P, Abaeva, I.S, De, S, Hellen, C.U.T, Pestova, T.V, Frank, J. 登録日 2021-11-25 公開日 2022-07-13 最終更新日 2023-02-01 実験手法 ELECTRON MICROSCOPY (3.7 Å) 主引用文献 Molecular architecture of 40S translation initiation complexes on the hepatitis C virus IRES. Embo J., 41, 2022
7SYI	Structure of the HCV IRES binding to the 40S ribosomal subunit, closed conformation. Structure 3(delta dII) 分子名称: 18S rRNA, 40S ribosomal protein S21, 40S ribosomal protein S24, ... 著者 Brown, Z.P, Abaeva, I.S, De, S, Hellen, C.U.T, Pestova, T.V, Frank, J. 登録日 2021-11-25 公開日 2022-07-13 最終更新日 2024-06-05 実験手法 ELECTRON MICROSCOPY (4.5 Å) 主引用文献 Molecular architecture of 40S translation initiation complexes on the hepatitis C virus IRES. Embo J., 41, 2022
7SYK	Structure of the HCV IRES binding to the 40S ribosomal subunit, closed conformation. Structure 5(delta dII) 分子名称: 18S rRNA, 40S ribosomal protein S21, 40S ribosomal protein S24, ... 著者 Brown, Z.P, Abaeva, I.S, De, S, Hellen, C.U.T, Pestova, T.V, Frank, J. 登録日 2021-11-25 公開日 2022-07-13 最終更新日 2024-06-05 実験手法 ELECTRON MICROSCOPY (4.2 Å) 主引用文献 Molecular architecture of 40S translation initiation complexes on the hepatitis C virus IRES. Embo J., 41, 2022
7SYU	Structure of the delta dII IRES w/o eIF2 48S initiation complex, closed conformation. Structure 13(delta dII) 分子名称: 18S rRNA, 40S ribosomal protein S21, 40S ribosomal protein S24, ... 著者 Brown, Z.P, Abaeva, I.S, De, S, Hellen, C.U.T, Pestova, T.V, Frank, J. 登録日 2021-11-25 公開日 2022-07-13 最終更新日 2023-02-01 実験手法 ELECTRON MICROSCOPY (4.6 Å) 主引用文献 Molecular architecture of 40S translation initiation complexes on the hepatitis C virus IRES. Embo J., 41, 2022
7SYT	Structure of the wt IRES w/o eIF2 48S initiation complex, closed conformation. Structure 13(wt) 分子名称: 18S rRNA, 40S ribosomal protein S21, 40S ribosomal protein S24, ... 著者 Brown, Z.P, Abaeva, I.S, De, S, Hellen, C.U.T, Pestova, T.V, Frank, J. 登録日 2021-11-25 公開日 2022-07-13 最終更新日 2023-02-01 実験手法 ELECTRON MICROSCOPY (4.4 Å) 主引用文献 Molecular architecture of 40S translation initiation complexes on the hepatitis C virus IRES. Embo J., 41, 2022
7SYV	Structure of the wt IRES eIF5B-containing pre-48S initiation complex, open conformation. Structure 14(wt) 分子名称: 18S rRNA, 40S ribosomal protein S2, 40S ribosomal protein S21, ... 著者 Brown, Z.P, Abaeva, I.S, De, S, Hellen, C.U.T, Pestova, T.V, Frank, J. 登録日 2021-11-25 公開日 2022-07-20 最終更新日 2023-02-01 実験手法 ELECTRON MICROSCOPY (3.9 Å) 主引用文献 Molecular architecture of 40S translation initiation complexes on the hepatitis C virus IRES. Embo J., 41, 2022
8AJZ	Serial femtosecond crystallography structure of CO bound ba3- type cytochrome c oxidase at 2 milliseconds after irradiation by a 532 nm laser 分子名称: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, CARBON MONOXIDE, COPPER (II) ION, ... 著者 Safari, C, Ghosh, S, Andersson, R, Johannesson, J, Donoso, A.V, Bath, P, Bosman, R, Dahl, P, Nango, E, Tanaka, R, Zoric, D, Svensson, E, Nakane, T, Iwata, S, Neutze, R, Branden, G. 登録日 2022-07-29 公開日 2023-08-16 最終更新日 2024-03-20 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Time-resolved serial crystallography to track the dynamics of carbon monoxide in the active site of cytochrome c oxidase. Sci Adv, 9, 2023
8WQI	Local refinement of FEM1B bound with the C-degron of CUX1 分子名称: Protein CASP, Protein fem-1 homolog B 著者 Chen, X, Zhang, K, Xu, C. 登録日 2023-10-11 公開日 2024-04-03 最終更新日 2024-05-08 実験手法 ELECTRON MICROSCOPY (3.5 Å) 主引用文献 Mechanism of Psi-Pro/C-degron recognition by the CRL2 FEM1B ubiquitin ligase. Nat Commun, 15, 2024
7SYN	Structure of the HCV IRES bound to the 40S ribosomal subunit, head opening. Structure 8(delta dII) 分子名称: 18S rRNA, 40S ribosomal protein S2, HCV IRES, ... 著者 Brown, Z.P, Abaeva, I.S, De, S, Hellen, C.U.T, Pestova, T.V, Frank, J. 登録日 2021-11-25 公開日 2022-07-13 実験手法 ELECTRON MICROSCOPY (4 Å) 主引用文献 Molecular architecture of 40S initiation complexes on the Hepatitis C virus IRES: from ribosomal attachment to eIF5B-mediated reorientation of initiator tRNA To Be Published
7SYJ	Structure of the HCV IRES binding to the 40S ribosomal subunit, closed conformation. Structure 4(delta dII) 分子名称: 18S rRNA, 40S ribosomal protein S21, 40S ribosomal protein S24, ... 著者 Brown, Z.P, Abaeva, I.S, De, S, Hellen, C.U.T, Pestova, T.V, Frank, J. 登録日 2021-11-25 公開日 2022-07-13 最終更新日 2024-06-05 実験手法 ELECTRON MICROSCOPY (4.8 Å) 主引用文献 Molecular architecture of 40S translation initiation complexes on the hepatitis C virus IRES. Embo J., 41, 2022
7SYL	Structure of the HCV IRES bound to the 40S ribosomal subunit, closed conformation. Structure 6(delta dII) 分子名称: 18S rRNA, 40S ribosomal protein S21, 40S ribosomal protein S24, ... 著者 Brown, Z.P, Abaeva, I.S, De, S, Hellen, C.U.T, Pestova, T.V, Frank, J. 登録日 2021-11-25 公開日 2022-07-13 最終更新日 2024-06-05 実験手法 ELECTRON MICROSCOPY (4.5 Å) 主引用文献 Molecular architecture of 40S translation initiation complexes on the hepatitis C virus IRES. Embo J., 41, 2022
7SYX	Structure of the delta dII IRES eIF5B-containing 48S initiation complex, closed conformation. Structure 15(delta dII) 分子名称: 18S rRNA, 40S ribosomal protein S24, 40S ribosomal protein S25, ... 著者 Brown, Z.P, Abaeva, I.S, De, S, Hellen, C.U.T, Pestova, T.V, Frank, J. 登録日 2021-11-25 公開日 2022-07-13 最終更新日 2023-03-08 実験手法 ELECTRON MICROSCOPY (3.7 Å) 主引用文献 Molecular architecture of 40S translation initiation complexes on the hepatitis C virus IRES. Embo J., 41, 2022
1EX4	HIV-1 INTEGRASE CATALYTIC CORE AND C-TERMINAL DOMAIN 分子名称: 3-[(3-CHOLAMIDOPROPYL)DIMETHYLAMMONIO]-1-PROPANESULFONATE, INTEGRASE 著者 Chen, J.C.-H, Krucinski, J, Miercke, L.J.W, Finer-Moore, J.S, Tang, A.H, Leavitt, A.D, Stroud, R.M. 登録日 2000-04-28 公開日 2000-06-07 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 Crystal structure of the HIV-1 integrase catalytic core and C-terminal domains: a model for viral DNA binding. Proc.Natl.Acad.Sci.USA, 97, 2000
6TZN	Structure of S. pombe telomerase accessory protein Pof8 C-terminal domain 分子名称: NITRATE ION, Protein pof8 著者 Basu, R.S, Cascio, D, Eichhorn, C.D, Feigon, J. 登録日 2019-08-12 公開日 2020-08-19 最終更新日 2024-03-13 実験手法 X-RAY DIFFRACTION (1.35 Å) 主引用文献 Structure of S. pombe telomerase protein Pof8 C-terminal domain is an xRRM conserved among LARP7 proteins. Rna Biol., 18, 2021
1F39	CRYSTAL STRUCTURE OF THE LAMBDA REPRESSOR C-TERMINAL DOMAIN 分子名称: REPRESSOR PROTEIN CI 著者 Bell, C.E, Frescura, P, Hochschild, A, Lewis, M. 登録日 2000-06-01 公開日 2000-07-26 最終更新日 2011-07-13 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Crystal structure of the lambda repressor C-terminal domain provides a model for cooperative operator binding. Cell(Cambridge,Mass.), 101, 2000
8CK3	STRUCTURE OF HIF2A-ARNT HETERODIMER IN COMPLEX WITH (S)-1-(3,5-Difluoro-phenyl)-5,5-difluoro-3-methanesulfonyl-5,6-dihydro-4H-cyclopenta[c]thiophen-4-ol 分子名称: (4~{S})-1-[3,5-bis(fluoranyl)phenyl]-5,5-bis(fluoranyl)-3-methylsulfonyl-4,6-dihydrocyclopenta[c]thiophen-4-ol, Aryl hydrocarbon receptor nuclear translocator, DIMETHYL SULFOXIDE, ... 著者 Musil, D, Lehmannn, M, Diehl, L. 登録日 2023-02-14 公開日 2023-07-19 最終更新日 2024-06-19 実験手法 X-RAY DIFFRACTION (1.707 Å) 主引用文献 Discovery of Cycloalkyl[ c ]thiophenes as Novel Scaffolds for Hypoxia-Inducible Factor-2 alpha Inhibitors. J.Med.Chem., 66, 2023
8CK8	STRUCTURE OF HIF2A-ARNT HETERODIMER IN COMPLEX WITH (S)-1-Cyclohexyloxy-5,5-difluoro-3-methanesulfonyl-5,6-dihydro-4H-cyclopenta[c]thiophen-4-ol 分子名称: (4~{S})-1-cyclohexyloxy-5,5-bis(fluoranyl)-3-methylsulfonyl-4,6-dihydrocyclopenta[c]thiophen-4-ol, Aryl hydrocarbon receptor nuclear translocator, Endothelial PAS domain-containing protein 1 著者 Musil, D. 登録日 2023-02-14 公開日 2023-07-19 最終更新日 2024-06-19 実験手法 X-RAY DIFFRACTION (2.302 Å) 主引用文献 Discovery of Cycloalkyl[ c ]thiophenes as Novel Scaffolds for Hypoxia-Inducible Factor-2 alpha Inhibitors. J.Med.Chem., 66, 2023
7YVD	The crystal structure of the progerin C-terminal peptide and the Ig-like domain of lamin A/C 分子名称: Lamin-A/C, SELENOCYSTEINE 著者 Ahn, J, Ha, N.C. 登録日 2022-08-19 公開日 2023-08-30 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 The crystal structure of the progerin C-terminal peptide and the Ig-like domain of lamin A/C To Be Published
6LDP	Structure of CDK5R1-bound FEM1C 分子名称: Protein fem-1 homolog C,Peptide from Cyclin-dependent kinase 5 activator 1, SULFATE ION 著者 Chen, X, Liao, S, Xu, C. 登録日 2019-11-22 公開日 2020-10-21 最終更新日 2024-03-20 実験手法 X-RAY DIFFRACTION (2.35 Å) 主引用文献 Molecular basis for arginine C-terminal degron recognition by Cul2 FEM1 E3 ligase. Nat.Chem.Biol., 17, 2021
6S9I	Human Brr2 Helicase Region D534C/N1866C in complex with C-tail deleted Jab1 分子名称: Pre-mRNA-processing-splicing factor 8, U5 small nuclear ribonucleoprotein 200 kDa helicase 著者 Vester, K, Santos, K.F, Wahl, M.C. 登録日 2019-07-13 公開日 2020-01-22 最終更新日 2020-02-26 実験手法 X-RAY DIFFRACTION (2.598 Å) 主引用文献 The inactive C-terminal cassette of the dual-cassette RNA helicase BRR2 both stimulates and inhibits the activity of the N-terminal helicase unit. J.Biol.Chem., 295, 2020
8JAL	Structure of CRL2APPBP2 bound with RxxGP degron (dimer) 分子名称: Amyloid protein-binding protein 2, Cullin-2, Elongin-B, ... 著者 Zhao, S, Zhang, K, Xu, C. 登録日 2023-05-06 公開日 2023-10-18 最終更新日 2023-10-25 実験手法 ELECTRON MICROSCOPY (3.3 Å) 主引用文献 Molecular basis for C-degron recognition by CRL2 APPBP2 ubiquitin ligase. Proc.Natl.Acad.Sci.USA, 120, 2023
8VJ1	Structure of C-terminal domain of telomere resolvase, ResT, from Borrelia garinii 分子名称: Telomere resolvase ResT 著者 Semper, C, Savchenko, A, Watanabe, N, Center for Structural Biology of Infectious Diseases (CSBID) 登録日 2024-01-05 公開日 2024-07-17 実験手法 X-RAY DIFFRACTION (2.26 Å) 主引用文献 Structure analysis of the telomere resolvase from the Lyme disease spirochete Borrelia garinii reveals functional divergence of its C-terminal domain. Nucleic Acids Res., 2024
1GG8	DESIGN OF INHIBITORS OF GLYCOGEN PHOSPHORYLASE: A STUDY OF ALPHA-AND BETA-C-GLUCOSIDES AND 1-THIO-BETA-D-GLUCOSE COMPOUNDS 分子名称: ALPHA-D-GLUCOPYRANOSYL-2-CARBOXYLIC ACID AMIDE, INOSINIC ACID, PROTEIN (GLYCOGEN PHOSPHORYLASE), ... 著者 Watson, K.A, Mitchell, E.P, Johnson, L.N, Son, J.C, Bichard, C.J, Orchard, M.G, Fleet, G.W, Oikonomakos, N.G, Leonidas, D.D, Kontou, M, Papageorgiou, A.C. 登録日 2000-07-30 公開日 2000-08-23 最終更新日 2023-08-09 実験手法 X-RAY DIFFRACTION (2.31 Å) 主引用文献 Design of inhibitors of glycogen phosphorylase: a study of alpha- and beta-C-glucosides and 1-thio-beta-D-glucose compounds. Biochemistry, 33, 1994

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