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7OOB
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Pol II-CSB-CSA-DDB1-UVSSA-ADPBeF3 (Structure2)
分子名称: ADENOSINE-5'-DIPHOSPHATE, BERYLLIUM TRIFLUORIDE ION, DNA damage-binding protein 1, ...
著者Kokic, G, Cramer, P.
登録日2021-05-27
公開日2021-10-13
最終更新日2021-10-27
実験手法ELECTRON MICROSCOPY (2.7 Å)
主引用文献Structural basis of human transcription-DNA repair coupling.
Nature, 598, 2021
6G7E
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Crystal structure of Chaetomium thermophilum Mot1 (E1434Q, 1837-1886 deletion mutant)
分子名称: Helicase-like protein
著者Butryn, A, Hopfner, K.-P.
登録日2018-04-05
公開日2018-10-17
実験手法X-RAY DIFFRACTION (3.2129 Å)
主引用文献Crystal structure of the full Swi2/Snf2 remodeler Mot1 in the resting state.
Elife, 7, 2018
7Z7N
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Mot1E1434Q:TBP:DNA - substrate recognition state
分子名称: DNA (36-MER), Helicase-like protein, Putative tata-box binding protein
著者Woike, S, Eustermann, S, Jung, J, Wenzl, S.J, Hagemann, G, Bartho, J.D, Lammens, K, Butryn, A, Herzog, F, Hopfner, K.-P.
登録日2022-03-16
公開日2023-03-29
最終更新日2023-05-31
実験手法ELECTRON MICROSCOPY (5.1 Å)
主引用文献Structural basis for TBP displacement from TATA box DNA by the Swi2/Snf2 ATPase Mot1.
Nat.Struct.Mol.Biol., 30, 2023
7Z8S
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Mot1:TBP:DNA - post hydrolysis state
分子名称: DNA (36-MER), Helicase-like protein, Putative tata-box binding protein
著者Woike, S, Eustermann, S, Jung, J, Wenzl, S.J, Hagemann, G, Bartho, J.D, Lammens, K, Butryn, A, Herzog, F, Hopfner, K.-P.
登録日2022-03-18
公開日2023-03-29
最終更新日2023-05-31
実験手法ELECTRON MICROSCOPY (3.9 Å)
主引用文献Structural basis for TBP displacement from TATA box DNA by the Swi2/Snf2 ATPase Mot1.
Nat.Struct.Mol.Biol., 30, 2023
7ZB5
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Mot1(1-1836):TBP:DNA - post-hydrolysis complex dimer
分子名称: DNA (36-MER), Helicase-like protein, Putative tata-box binding protein
著者Woike, S, Eustermann, S, Jung, J, Wenzl, S.J, Hagemann, G, Bartho, J.D, Lammens, K, Butryn, A, Herzog, F, Hopfner, K.-P.
登録日2022-03-23
公開日2023-04-05
最終更新日2023-05-31
実験手法ELECTRON MICROSCOPY (2.8 Å)
主引用文献Structural basis for TBP displacement from TATA box DNA by the Swi2/Snf2 ATPase Mot1.
Nat.Struct.Mol.Biol., 30, 2023
8TVY
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BU of 8tvy by Molmil
Cryo-EM structure of CPD lesion containing RNA Polymerase II elongation complex with Rad26 and Elf1 (closed state)
分子名称: DNA (NTS), DNA (TS), DNA-directed RNA polymerase II subunit RPB1, ...
著者Sarsam, R.D, Lahiri, I, Leschziner, A.E.
登録日2023-08-18
公開日2024-01-24
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献Elf1 promotes Rad26's interaction with lesion-arrested Pol II for transcription-coupled repair.
Proc.Natl.Acad.Sci.USA, 121, 2024
7ZKE
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BU of 7zke by Molmil
Mot1:TBP:DNA - pre-hydrolysis state
分子名称: ADENOSINE-5'-DIPHOSPHATE, BERYLLIUM TRIFLUORIDE ION, DNA (36-MER), ...
著者Woike, S, Eustermann, S, Jung, J, Wenzl, S.J, Hagemann, G, Bartho, J.D, Lammens, K, Butryn, A, Herzog, F, Hopfner, K.-P.
登録日2022-04-12
公開日2023-04-26
最終更新日2023-05-31
実験手法ELECTRON MICROSCOPY (3.6 Å)
主引用文献Structural basis for TBP displacement from TATA box DNA by the Swi2/Snf2 ATPase Mot1.
Nat.Struct.Mol.Biol., 30, 2023
8B3F
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BU of 8b3f by Molmil
Pol II-CSB-CSA-DDB1-ELOF1
分子名称: DNA damage-binding protein 1, DNA excision repair protein ERCC-6, DNA excision repair protein ERCC-8, ...
著者Kokic, G, Cramer, P.
登録日2022-09-16
公開日2023-09-27
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献Pol II-CSB-CSA-DDB1-ELOF1 structure.
To Be Published
8B3D
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BU of 8b3d by Molmil
Structure of the Pol II-TCR-ELOF1 complex.
分子名称: ADENOSINE-5'-DIPHOSPHATE, BERYLLIUM TRIFLUORIDE ION, DNA damage-binding protein 1, ...
著者Kokic, G, Cramer, P.
登録日2022-09-16
公開日2023-09-27
実験手法ELECTRON MICROSCOPY (2.6 Å)
主引用文献Structure of the Pol II-TCR-ELOF1 complex.
To Be Published
6LTH
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BU of 6lth by Molmil
Structure of human BAF Base module
分子名称: AT-rich interactive domain-containing protein 1A, SWI/SNF complex subunit SMARCC2, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, ...
著者He, S, Wu, Z, Tian, Y, Yu, Z, Yu, J, Wang, X, Li, J, Liu, B, Xu, Y.
登録日2020-01-22
公開日2020-02-12
最終更新日2024-05-29
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献Structure of nucleosome-bound human BAF complex.
Science, 367, 2020
6PWF
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BU of 6pwf by Molmil
Cryo-EM structure of the ATPase domain of chromatin remodeling factor ISWI bound to the nucleosome
分子名称: DNA (147-MER), Histone H2A, Histone H2B, ...
著者Chittori, S, Subramaniam, S.
登録日2019-07-22
公開日2019-08-21
最終更新日2024-03-20
実験手法ELECTRON MICROSCOPY (4.07 Å)
主引用文献Structure of the primed state of the ATPase domain of chromatin remodeling factor ISWI bound to the nucleosome.
Nucleic Acids Res., 47, 2019
8HE5
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BU of 8he5 by Molmil
RNA polymerase II elongation complex bound with Rad26 and Elf1, stalled at SHL(-3.5) of the nucleosome
分子名称: DNA (198-MER), DNA repair protein, DNA-directed RNA polymerase subunit, ...
著者Osumi, K, Kujirai, T, Ehara, H, Kinoshita, C, Saotome, M, Kagawa, W, Sekine, S, Takizawa, Y, Kurumizaka, H.
登録日2022-11-07
公開日2023-07-05
実験手法ELECTRON MICROSCOPY (6.95 Å)
主引用文献Structural Basis of Damaged Nucleotide Recognition by Transcribing RNA Polymerase II in the Nucleosome.
J.Mol.Biol., 435, 2023
5O9G
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BU of 5o9g by Molmil
Structure of nucleosome-Chd1 complex
分子名称: ADENOSINE-5'-DIPHOSPHATE, BERYLLIUM TRIFLUORIDE ION, Chromo domain-containing protein 1, ...
著者Farnung, L, Vos, S.M, Wigge, C, Cramer, P.
登録日2017-06-19
公開日2017-10-11
最終更新日2024-05-15
実験手法ELECTRON MICROSCOPY (4.8 Å)
主引用文献Nucleosome-Chd1 structure and implications for chromatin remodelling.
Nature, 550, 2017
8EUF
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BU of 8euf by Molmil
Class2 of the INO80-Nucleosome complex
分子名称: ADENOSINE-5'-DIPHOSPHATE, Actin-related protein 5, Chromatin-remodeling ATPase INO80, ...
著者Wu, H, Munoz, E, Gourdet, M, Narlikar, G, Cheng, Y.F.
登録日2022-10-18
公開日2023-07-12
最終更新日2023-08-16
実験手法ELECTRON MICROSCOPY (3.41 Å)
主引用文献Reorientation of INO80 on hexasomes reveals basis for mechanistic versatility.
Science, 381, 2023
6V92
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BU of 6v92 by Molmil
RSC-NCP
分子名称: Actin-like protein ARP9, Actin-related protein 7, Chromatin structure-remodeling complex protein RSC14, ...
著者Patel, A.B, Moore, C.M, Greber, B.J, Nogales, E.
登録日2019-12-13
公開日2020-01-15
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (20 Å)
主引用文献Architecture of the chromatin remodeler RSC and insights into its nucleosome engagement.
Elife, 8, 2019
6VZ4
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BU of 6vz4 by Molmil
Cryo-EM structure of Sth1-Arp7-Arp9-Rtt102 bound to the nucleosome in ADP Beryllium Fluoride state
分子名称: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, Actin-like protein ARP9, ...
著者Leschziner, A.E, Baker, R.W.
登録日2020-02-27
公開日2020-12-02
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (3.9 Å)
主引用文献Structural insights into assembly and function of the RSC chromatin remodeling complex.
Nat.Struct.Mol.Biol., 28, 2021
6VZG
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BU of 6vzg by Molmil
Cryo-EM structure of Sth1-Arp7-Arp9-Rtt102
分子名称: ADENOSINE-5'-TRIPHOSPHATE, Actin-like protein ARP9, Actin-related protein 7, ...
著者Leschziner, A.E, Baker, R.W.
登録日2020-02-28
公開日2020-12-02
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (4.2 Å)
主引用文献Structural insights into assembly and function of the RSC chromatin remodeling complex.
Nat.Struct.Mol.Biol., 28, 2021
7R78
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BU of 7r78 by Molmil
cryo-EM structure of DNMT5 quaternary complex with hemimethylated DNA, AMP-PNP and SAH
分子名称: DNA (5'-D(*TP*GP*CP*GP*CP*TP*GP*AP*CP*A)-3'), DNA (5'-D(P*CP*AP*GP*(5CM)P*GP*CP*AP*T)-3'), DNA repair protein Rad8, ...
著者Wang, J, Patel, D.J.
登録日2021-06-24
公開日2022-02-23
最終更新日2022-03-30
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献Structural insights into DNMT5-mediated ATP-dependent high-fidelity epigenome maintenance.
Mol.Cell, 82, 2022
7R76
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Cryo-EM structure of DNMT5 in apo state
分子名称: DNA repair protein Rad8, ZINC ION
著者Wang, J, Patel, D.J.
登録日2021-06-24
公開日2022-02-23
最終更新日2022-03-30
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Structural insights into DNMT5-mediated ATP-dependent high-fidelity epigenome maintenance.
Mol.Cell, 82, 2022
7R77
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BU of 7r77 by Molmil
Cryo-EM structure of DNMT5 binary complex with hemimethylated DNA
分子名称: DNA (5'-D(P*GP*TP*CP*AP*GP*(5CM)P*GP*CP*AP*TP*GP*G)-3'), DNA repair protein Rad8, ZINC ION
著者Wang, J, Patel, D.J.
登録日2021-06-24
公開日2022-02-23
最終更新日2022-03-30
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献Structural insights into DNMT5-mediated ATP-dependent high-fidelity epigenome maintenance.
Mol.Cell, 82, 2022
7T02
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BU of 7t02 by Molmil
Cryo-EM structure of DNMT5 pseudo-ternary complex solved by incubation with hemimethylated DNA and SAM
分子名称: DNA (5'-D(*CP*CP*AP*TP*GP*CP*GP*CP*TP*GP*AP*CP*A)-3'), DNA (5'-D(P*GP*TP*CP*AP*GP*(5CM)P*GP*CP*AP*TP*GP*G)-3'), DNA repair protein Rad8, ...
著者Wang, J, Patel, D.J.
登録日2021-11-29
公開日2022-02-23
最終更新日2024-02-28
実験手法ELECTRON MICROSCOPY (3.8 Å)
主引用文献Structural insights into DNMT5-mediated ATP-dependent high-fidelity epigenome maintenance.
Mol.Cell, 82, 2022
7C4J
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BU of 7c4j by Molmil
Cryo-EM structure of the yeast Swi/Snf complex in a nucleosome free state
分子名称: Actin-like protein ARP9, Actin-related protein 7, Regulator of Ty1 transposition protein 102, ...
著者Wang, C.C, Guo, Z.Y, Zhan, X.C, Zhang, X.F.
登録日2020-05-18
公開日2020-07-15
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (2.89 Å)
主引用文献Structure of the yeast Swi/Snf complex in a nucleosome free state
Nat Commun, 2020
7ENN
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BU of 7enn by Molmil
The structure of ALC1 bound to the nucleosome
分子名称: ADENOSINE-5'-DIPHOSPHATE, BERYLLIUM TRIFLUORIDE ION, Chromodomain-helicase-DNA-binding protein 1-like, ...
著者Chen, Z.C, Chen, K.J, Wang, L.
登録日2021-04-18
公開日2021-07-14
実験手法ELECTRON MICROSCOPY (2.8 Å)
主引用文献Structural basis of ALC1/CHD1L autoinhibition and the mechanism of activation by the nucleosome.
Nat Commun, 12, 2021
7EGP
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BU of 7egp by Molmil
The structure of SWI/SNF-nucleosome complex
分子名称: ADENOSINE-5'-DIPHOSPHATE, Actin-like protein ARP9, Actin-related protein 7, ...
著者Chen, Z.C, Chen, K.J, He, Z.Y, Ye, Y.P.
登録日2021-03-24
公開日2022-01-12
実験手法ELECTRON MICROSCOPY (6.9 Å)
主引用文献Structure of the SWI/SNF complex bound to the nucleosome and insights into the functional modularity.
Cell Discov, 7, 2021
6RYU
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BU of 6ryu by Molmil
Nucleosome-CHD4 complex structure (two CHD4 copies)
分子名称: Chromodomain-helicase-DNA-binding protein 4,CHD4,Chromodomain-helicase-DNA-binding protein 4, DNA (149-MER), Histone H2A type 1, ...
著者Farnung, L, Ochmann, M, Cramer, P.
登録日2019-06-12
公開日2020-07-15
最終更新日2024-05-22
実験手法ELECTRON MICROSCOPY (4 Å)
主引用文献Nucleosome-CHD4 chromatin remodeller structure maps human disease mutations.
Elife, 9, 2020

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件を2024-05-29に公開中

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