PDB: 80 件ウェブページステータス検索Chemie searchBIRD

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5MZ2	Rubisco from Thalassiosira antarctica 分子名称: 1,2-ETHANEDIOL, 2-CARBOXYARABINITOL-1,5-DIPHOSPHATE, MAGNESIUM ION, ... 著者 Andersson, I, Valegard, K. 登録日 2017-01-30 公開日 2018-02-14 最終更新日 2019-04-24 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Structural and functional analyses of Rubisco from arctic diatom species reveal unusual posttranslational modifications. J. Biol. Chem., 293, 2018
5NV3	Structure of Rubisco from Rhodobacter sphaeroides in complex with CABP 分子名称: 2-CARBOXYARABINITOL-1,5-DIPHOSPHATE, MAGNESIUM ION, Ribulose bisphosphate carboxylase large chain, ... 著者 Bracher, A, Milicic, G, Ciniawsky, S, Wendler, P, Hayer-Hartl, M, Hartl, F.U. 登録日 2017-05-03 公開日 2017-07-26 最終更新日 2017-09-20 実験手法 ELECTRON MICROSCOPY (3.39 Å) 主引用文献 Mechanism of Enzyme Repair by the AAA(+) Chaperone Rubisco Activase. Mol. Cell, 67, 2017
3AXM	Structure of rice Rubisco in complex with 6PG 分子名称: 6-PHOSPHOGLUCONIC ACID, MAGNESIUM ION, Ribulose bisphosphate carboxylase large chain, ... 著者 Matsumura, H, Mizohata, E, Ishida, H, Kogami, A, Ueno, T, Makino, A, Inoue, T, Yokota, A, Mae, T, Kai, Y. 登録日 2011-04-11 公開日 2012-04-11 最終更新日 2013-06-05 実験手法 X-RAY DIFFRACTION (1.65 Å) 主引用文献 Crystal structure of rice Rubisco and implications for activation induced by positive effectors NADPH and 6-phosphogluconate J.Mol.Biol., 422, 2012
3AXK	Structure of rice Rubisco in complex with NADP(H) 分子名称: GLYCEROL, MAGNESIUM ION, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, ... 著者 Matsumura, H, Mizohata, E, Ishida, H, Kogami, A, Ueno, T, Makino, A, Inoue, T, Yokota, A, Mae, T, Kai, Y. 登録日 2011-04-11 公開日 2012-04-11 最終更新日 2013-06-05 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Crystal structure of rice Rubisco and implications for activation induced by positive effectors NADPH and 6-phosphogluconate J.Mol.Biol., 422, 2012
8Q04	Chlorella sorokiniana Rubisco: D4 symmetry imposed 分子名称: Ribulose bisphosphate carboxylase large chain, Ribulose bisphosphate carboxylase small subunit, chloroplastic 著者 Barrett, J, Blaza, J.N, Mackinder, L.C.M. 登録日 2023-07-27 公開日 2024-08-07 実験手法 ELECTRON MICROSCOPY (2.39 Å) 主引用文献 A promiscuous mechanism to phase separate eukaryotic carbon fixation To Be Published
8Q05	Chlorella sorokiniana Rubisco with CsLinker (alpha3-alpha4) bound: D4 symmetry expanded 分子名称: CsLinker (alpha3-alpha4), Ribulose bisphosphate carboxylase large chain, Ribulose bisphosphate carboxylase small subunit, ... 著者 Barrett, J, Blaza, J.N, Mackinder, L.C.M. 登録日 2023-07-27 公開日 2024-08-07 実験手法 ELECTRON MICROSCOPY (2.77 Å) 主引用文献 A promiscuous mechanism to phase separate eukaryotic carbon fixation To Be Published
8QJ0	Room-temperature Serial Synchrotron Crystallography structure of Spinacia oleracea RuBisCO 分子名称: MAGNESIUM ION, Ribulose bisphosphate carboxylase large chain, Ribulose bisphosphate carboxylase small subunit, ... 著者 Bjelcic, M, Neutze, R, Aurelius, O, Nan, J, Ursby, T. 登録日 2023-09-12 公開日 2024-05-29 最終更新日 2024-07-03 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Room-temperature serial synchrotron crystallography structure of Spinacia oleracea RuBisCO. Acta Crystallogr.,Sect.F, 80, 2024
8BDB	Ribulose-1,5-bisphosphate carboxylase/oxygenase from Griffithsia monilis 分子名称: 1,2-ETHANEDIOL, 2-CARBOXYARABINITOL-1,5-DIPHOSPHATE, BICARBONATE ION, ... 著者 Andersson, I, Gunn, L.H. 登録日 2022-10-19 公開日 2023-06-14 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 Grafting Rhodobacter sphaeroides with red algae Rubisco to accelerate catalysis and plant growth. Nat.Plants, 9, 2023
8BCM	Structure of Synechococcus elongatus PCC 7942 Rubisco recombinantly expressed from E.coli 分子名称: Ribulose 1,5-bisphosphate carboxylase small subunit, Ribulose bisphosphate carboxylase large chain 著者 Ni, T, Sun, Y, Liu, L.N, Zhang, P. 登録日 2022-10-17 公開日 2023-11-01 実験手法 ELECTRON MICROSCOPY (2.15 Å) 主引用文献 Structure of Rubisco To Be Published
7JN4	Rubisco in the apo state 分子名称: Ribulose bisphosphate carboxylase large chain, Ribulose bisphosphate carboxylase small chain 2, chloroplastic 著者 Matthies, D, Jonikas, M.C, He, S. 登録日 2020-08-03 公開日 2020-11-18 最終更新日 2020-12-23 実験手法 ELECTRON MICROSCOPY (2.68 Å) 主引用文献 The structural basis of Rubisco phase separation in the pyrenoid. Nat.Plants, 6, 2020
7JFO	EPYC1(49-72)-bound Rubisco 分子名称: LCI5, Ribulose bisphosphate carboxylase large chain, Ribulose bisphosphate carboxylase small chain 2, ... 著者 Matthies, D, Jonikas, M.C, He, S. 登録日 2020-07-17 公開日 2020-11-18 最終更新日 2020-12-23 実験手法 ELECTRON MICROSCOPY (2.13 Å) 主引用文献 The structural basis of Rubisco phase separation in the pyrenoid. Nat.Plants, 6, 2020
7JSX	EPYC1(106-135) peptide-bound Rubisco 分子名称: EPYC1, Ribulose bisphosphate carboxylase large chain, Ribulose bisphosphate carboxylase small chain 2, ... 著者 Matthies, D, He, S, Jonikas, M.C. 登録日 2020-08-16 公開日 2020-11-18 最終更新日 2020-12-23 実験手法 ELECTRON MICROSCOPY (2.06 Å) 主引用文献 The structural basis of Rubisco phase separation in the pyrenoid. Nat.Plants, 6, 2020
8CMY	Structure of the Cyanobium sp. PCC 7001 determined with C1 symmetry 分子名称: 2-CARBOXYARABINITOL-1,5-DIPHOSPHATE, MAGNESIUM ION, Ribulose bisphosphate carboxylase large chain, ... 著者 Evans, S.L, Bergeron, J.R.C. 登録日 2023-02-21 公開日 2023-03-22 最終更新日 2023-06-14 実験手法 ELECTRON MICROSCOPY (3.79 Å) 主引用文献 Single-particle cryo-EM analysis of the shell architecture and internal organization of an intact alpha-carboxysome. Structure, 31, 2023
4F0H	UNACTIVATED RUBISCO with OXYGEN BOUND 分子名称: OXYGEN MOLECULE, PHOSPHATE ION, Ribulose bisphosphate carboxylase large chain, ... 著者 Stec, B. 登録日 2012-05-04 公開日 2012-11-14 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (1.96 Å) 主引用文献 Structural mechanism of RuBisCO activation by carbamylation of the active site lysine. Proc.Natl.Acad.Sci.USA, 109, 2012
4F0M	UNACTIVATED RUBISCO with MAGNESIUM AND A WATER MOLECULE BOUND 分子名称: CHLORIDE ION, GLYCEROL, MAGNESIUM ION, ... 著者 Stec, B. 登録日 2012-05-04 公開日 2012-11-14 最終更新日 2024-10-09 実験手法 X-RAY DIFFRACTION (2.25 Å) 主引用文献 Structural mechanism of RuBisCO activation by carbamylation of the active site lysine. Proc.Natl.Acad.Sci.USA, 109, 2012
1AA1	ACTIVATED SPINACH RUBISCO IN COMPLEX WITH THE PRODUCT 3-PHOSPHOGLYCERATE 分子名称: 3-PHOSPHOGLYCERIC ACID, MAGNESIUM ION, RIBULOSE BISPHOSPHATE CARBOXYLASE (LARGE CHAIN), ... 著者 Taylor, T.C, Andersson, I. 登録日 1997-01-20 公開日 1997-07-07 最終更新日 2024-06-05 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Structure of a product complex of spinach ribulose-1,5-bisphosphate carboxylase/oxygenase. Biochemistry, 36, 1997
1AUS	ACTIVATED UNLIGANDED SPINACH RUBISCO 分子名称: FORMIC ACID, MAGNESIUM ION, RIBULOSE BISPHOSPHATE CARBOXYLASE/OXYGENASE 著者 Taylor, T.C, Andersson, I. 登録日 1995-06-21 公開日 1995-10-15 最終更新日 2011-07-13 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Structure of a product complex of spinach ribulose-1,5-bisphosphate carboxylase/oxygenase. Biochemistry, 36, 1997
4F0K	UNACTIVATED RUBISCO with MAGNESIUM AND CARBON DIOXIDE BOUND 分子名称: CARBON DIOXIDE, CHLORIDE ION, GLYCEROL, ... 著者 Stec, B. 登録日 2012-05-04 公開日 2012-11-14 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (2.05 Å) 主引用文献 Structural mechanism of RuBisCO activation by carbamylation of the active site lysine. Proc.Natl.Acad.Sci.USA, 109, 2012
1BWV	Activated Ribulose 1,5-Bisphosphate Carboxylase/Oxygenase (RUBISCO) Complexed with the Reaction Intermediate Analogue 2-Carboxyarabinitol 1,5-Bisphosphate 分子名称: 2-CARBOXYARABINITOL-1,5-DIPHOSPHATE, MAGNESIUM ION, PROTEIN (RIBULOSE BISPHOSPHATE CARBOXYLASE) 著者 Sugawara, H, Yamamoto, H, Shibata, N, Inoue, T, Miyake, C, Yokota, A, Kai, Y. 登録日 1998-09-29 公開日 1999-09-27 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 Crystal structure of carboxylase reaction-oriented ribulose 1, 5-bisphosphate carboxylase/oxygenase from a thermophilic red alga, Galdieria partita. J.Biol.Chem., 274, 1999
1GK8	Rubisco from Chlamydomonas reinhardtii 分子名称: 1,2-ETHANEDIOL, 2-CARBOXYARABINITOL-1,5-DIPHOSPHATE, MAGNESIUM ION, ... 著者 Taylor, T.C. 登録日 2001-08-09 公開日 2001-10-24 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (1.4 Å) 主引用文献 First Crystal Structure of Rubisco from a Green Alga, Chlamydomonas Reinhardtii. J.Biol.Chem., 276, 2001
7YK5	Rubisco from Phaeodactylum tricornutum bound to PYCO1(452-592) 分子名称: 2-CARBOXYARABINITOL-1,5-DIPHOSPHATE, Multifunctional fusion protein, PYCO1 LSU binding motif, ... 著者 Oh, Z.G, Ang, W.S.L, Bhushan, S, Mueller-Cajar, O. 登録日 2022-07-21 公開日 2023-06-21 実験手法 ELECTRON MICROSCOPY (2 Å) 主引用文献 A linker protein from a red-type pyrenoid phase separates with Rubisco via oligomerizing sticker motifs. Proc.Natl.Acad.Sci.USA, 120, 2023
6HBC	Structure of the repeat unit in the network formed by CcmM and Rubisco from Synechococcus elongatus 分子名称: Carbon dioxide concentrating mechanism protein CcmM, Ribulose 1,5-bisphosphate carboxylase small subunit, Ribulose bisphosphate carboxylase large chain 著者 Wang, H, Yan, X, Aigner, H, Bracher, A, Nguyen, N.D, Hee, W.Y, Long, B.M, Price, G.D, Hartl, F.U, Hayer-Hartl, M. 登録日 2018-08-10 公開日 2018-12-12 最終更新日 2024-05-15 実験手法 ELECTRON MICROSCOPY (2.78 Å) 主引用文献 Rubisco condensate formation by CcmM in beta-carboxysome biogenesis. Nature, 566, 2019
1EJ7	CRYSTAL STRUCTURE OF UNACTIVATED TOBACCO RUBISCO WITH BOUND PHOSPHATE IONS 分子名称: PHOSPHATE ION, RUBISCO (LARGE SUBUNIT), RUBISCO (SMALL SUBUNIT) 著者 Duff, A.P, Andrews, T.J, Curmi, P.M.G. 登録日 2000-03-01 公開日 2000-03-15 最終更新日 2011-07-13 実験手法 X-RAY DIFFRACTION (2.45 Å) 主引用文献 The transition between the open and closed states of rubisco is triggered by the inter-phosphate distance of the bound bisphosphate. J.Mol.Biol., 298, 2000
7ZC1	Subtomogram averaging of Rubisco from Cyanobium carboxysome 分子名称: Ribulose bisphosphate carboxylase large chain, Ribulose bisphosphate carboxylase, small subunit 著者 Ni, T, Zhu, Y, Seaton-Burn, W, Zhang, P. 登録日 2022-03-25 公開日 2022-07-06 最終更新日 2024-07-24 実験手法 ELECTRON MICROSCOPY (3.8 Å) 主引用文献 Structure and assembly of cargo Rubisco in two native alpha-carboxysomes. Nat Commun, 13, 2022
7ZBT	Subtomogram averaging of Rubisco from native Halothiobacillus carboxysomes 分子名称: Ribulose bisphosphate carboxylase large chain, Ribulose bisphosphate carboxylase small subunit 著者 Ni, T, Zhu, Y, Yu, X, Sun, Y, Liu, L, Zhang, P. 登録日 2022-03-24 公開日 2022-07-20 最終更新日 2024-07-24 実験手法 ELECTRON MICROSCOPY (3.3 Å) 主引用文献 Structure and assembly of cargo Rubisco in two native alpha-carboxysomes. Nat Commun, 13, 2022

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