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7JT1
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70S ribosome stalled on long mRNA with ArfB-1 and ArfB-2 bound (+9-III)
分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ...
著者Carbone, C.E, Korostelev, A.A.
登録日2020-08-16
公開日2020-11-11
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献ArfB can displace mRNA to rescue stalled ribosomes
Nat Commun, 11, 2020
7JT2
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BU of 7jt2 by Molmil
70S ribosome stalled on long mRNA with ArfB bound in the A site
分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ...
著者Carbone, C.E, Korostelev, A.A.
登録日2020-08-16
公開日2020-11-11
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献ArfB can displace mRNA to rescue stalled ribosomes
Nat Commun, 11, 2020
1N6J
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BU of 1n6j by Molmil
Structural basis of sequence-specific recruitment of histone deacetylases by Myocyte Enhancer Factor-2
分子名称: 5'-D(*AP*GP*CP*TP*AP*TP*TP*TP*AP*TP*AP*AP*GP*C)-3', 5'-D(*GP*CP*TP*TP*AP*TP*AP*AP*AP*TP*AP*GP*CP*T)-3', Calcineurin-binding protein Cabin 1, ...
著者Han, A, Pan, F, Stroud, J.C, Youn, H.D, Liu, J.O, Chen, L.
登録日2002-11-11
公開日2003-11-11
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Sequence-specific recruitment of transcriptional co-repressor Cabin1 by myocyte enhancer factor-2
Nature, 422, 2003
2XPV
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TetR(D) in complex with minocycline and magnesium.
分子名称: (4S,4AS,5AR,12AS)-4,7-BIS(DIMETHYLAMINO)-3,10,12,12A-TETRAHYDROXY-1,11-DIOXO-1,4,4A,5,5A,6,11,12A-OCTAHYDROTETRACENE-2- CARBOXAMIDE, CHLORIDE ION, MAGNESIUM ION, ...
著者Dalm, D, Proft, J, Palm, G.J, Hinrichs, W.
登録日2010-08-30
公開日2011-09-07
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.49 Å)
主引用文献Tetr(D) in Complex with Minocycline.
To be Published
7JSS
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BU of 7jss by Molmil
ArfB Rescue of a 70S Ribosome stalled on truncated mRNA with a partial A-site codon (+2-II)
分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ...
著者Carbone, C.E, Korostelev, A.A.
登録日2020-08-15
公開日2020-11-11
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (3.7 Å)
主引用文献ArfB can displace mRNA to rescue stalled ribosomes.
Nat Commun, 11, 2020
7JT3
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BU of 7jt3 by Molmil
Rotated 70S ribosome stalled on long mRNA with ArfB-1 and ArfB-2 bound in the A site (+9-IV)
分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ...
著者Carbone, C.E, Korostelev, A.A.
登録日2020-08-17
公開日2020-11-11
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (3.7 Å)
主引用文献ArfB can displace mRNA to rescue stalled ribosomes
Nat Commun, 11, 2020
7JSZ
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BU of 7jsz by Molmil
ArfB Rescue of a 70S Ribosome stalled on truncated mRNA with a partial A-site codon (+2-IV)
分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ...
著者Carbone, C.E, Korostelev, A.A.
登録日2020-08-16
公開日2020-11-11
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (3.7 Å)
主引用文献ArfB can displace mRNA to rescue stalled ribosomes.
Nat Commun, 11, 2020
2XPW
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BU of 2xpw by Molmil
TetR(D) in complex with oxytetracycline and magnesium.
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CHLORIDE ION, MAGNESIUM ION, ...
著者Dalm, D, Proft, J, Palm, G.J, Hinrichs, W.
登録日2010-08-30
公開日2011-09-07
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.44 Å)
主引用文献Tetr(D) in Complex with Oxytetracycline.
To be Published
7JSW
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BU of 7jsw by Molmil
ArfB Rescue of a 70S Ribosome stalled on truncated mRNA with a partial A-site codon (+2-III)
分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ...
著者Carbone, C.E, Korostelev, A.A.
登録日2020-08-16
公開日2020-11-11
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (3.8 Å)
主引用文献ArfB can displace mRNA to rescue stalled ribosomes.
Nat Commun, 11, 2020
6L5K
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BU of 6l5k by Molmil
ARF5 Aux/IAA17 Complex
分子名称: Auxin response factor 5, Auxin-responsive protein IAA17
著者Ryu, K.S, Suh, J.Y, Cha, S.Y, Kim, Y.I, Park, C.K.
登録日2019-10-24
公開日2020-09-02
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.91 Å)
主引用文献Determinants of PB1 Domain Interactions in Auxin Response Factor ARF5 and Repressor IAA17.
J.Mol.Biol., 432, 2020
1PPF
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BU of 1ppf by Molmil
X-RAY CRYSTAL STRUCTURE OF THE COMPLEX OF HUMAN LEUKOCYTE ELASTASE (PMN ELASTASE) AND THE THIRD DOMAIN OF THE TURKEY OVOMUCOID INHIBITOR
分子名称: HUMAN LEUKOCYTE ELASTASE, TURKEY OVOMUCOID INHIBITOR (OMTKY3), alpha-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-6)-[alpha-D-mannopyranose-(1-3)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Bode, W, Wei, A-Z.
登録日1991-10-24
公開日1994-01-31
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献X-ray crystal structure of the complex of human leukocyte elastase (PMN elastase) and the third domain of the turkey ovomucoid inhibitor.
EMBO J., 5, 1986
3ORC
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BU of 3orc by Molmil
CRYSTAL STRUCTURE OF AN ENGINEERED CRO MONOMER BOUND NONSPECIFICALLY TO DNA
分子名称: DNA (5'-D(*TP*AP*TP*CP*GP*AP*TP*A)-3'), PROTEIN (CRO REPRESSOR)
著者Albright, R.A, Mossing, M.C, Matthews, B.W.
登録日1998-04-23
公開日1998-12-02
最終更新日2023-08-02
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Crystal structure of an engineered Cro monomer bound nonspecifically to DNA: possible implications for nonspecific binding by the wild-type protein.
Protein Sci., 7, 1998
2KC8
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BU of 2kc8 by Molmil
Structure of E. coli toxin RelE (R81A/R83A) mutant in complex with antitoxin RelBc (K47-L79) peptide
分子名称: Antitoxin RelB, Toxin relE
著者Li, G, Zhang, Y, Inouye, M, Ikura, M.
登録日2008-12-17
公開日2009-03-17
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Inhibitory mechanism of Escherichia coli RelE-RelB toxin-antitoxin module involves a helix displacement near an mRNA interferase active site.
J.Biol.Chem., 284, 2009
7L4S
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BU of 7l4s by Molmil
Crystal structure of the OxyR regulatory domain of Shewanella oneidensis MR-1, reduced form
分子名称: Transcriptional regulator of oxidative stress OxyR
著者Tao, Y.J, Gao, H.
登録日2020-12-21
公開日2022-02-09
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Functional Irreplaceability of Escherichia coli and Shewanella oneidensis OxyRs Is Critically Determined by Intrinsic Differences in Oligomerization.
Mbio, 13, 2022
3ZQF
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BU of 3zqf by Molmil
Structure of Tetracycline repressor in complex with antiinducer peptide-TAP1
分子名称: ANTI-INDUCER PEPTIDE TAP1, TETRACYCLINE REPRESSOR PROTEIN CLASS B FROM TRANSPOSON TN10, TETRACYCLINE REPRESSOR PROTEIN CLASS D
著者Sevvana, M, Goeke, D, Stoeckle, C, Kaspar, D, Grubmueller, S, Goetz, C, Wimmer, C, Berens, C, Klotzsche, M, Muller, Y.A, Hillen, W.
登録日2011-06-09
公開日2011-12-28
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.56 Å)
主引用文献An Exclusive Alpha/Beta Code Directs Allostery in Tetr-Peptide Complexes.
J.Mol.Biol., 416, 2012
3ZQI
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BU of 3zqi by Molmil
Structure of Tetracycline repressor in complex with inducer peptide- TIP2
分子名称: 1,2-ETHANEDIOL, INDUCER PEPTIDE TIP2, MAGNESIUM ION, ...
著者Sevvana, M, Goeke, D, Stoeckle, C, Kaspar, D, Grubmueller, S, Goetz, C, Wimmer, C, Berens, C, Klotzsche, M, Muller, Y.A, Hillen, W.
登録日2011-06-09
公開日2011-12-28
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献An Exclusive Alpha/Beta Code Directs Allostery in Tetr-Peptide Complexes.
J.Mol.Biol., 416, 2012
3ZQG
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BU of 3zqg by Molmil
Structure of Tetracycline repressor in complex with antiinducer peptide-TAP2
分子名称: ANTI-INDUCER PEPTIDE TAP2, TETRACYCLINE REPRESSOR PROTEIN CLASS B FROM TRANSPOSON TN10, TETRACYCLINE REPRESSOR PROTEIN CLASS D
著者Sevvana, M, Goeke, D, Stoeckle, C, Kaspar, D, Grubmueller, S, Goetz, C, Wimmer, C, Berens, C, Klotzsche, M, Muller, Y.A, Hillen, W.
登録日2011-06-09
公開日2011-12-28
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.45 Å)
主引用文献An Exclusive Alpha/Beta Code Directs Allostery in Tetr-Peptide Complexes.
J.Mol.Biol., 416, 2012
3MNL
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BU of 3mnl by Molmil
The crystal structure of KstR (Rv3574) from Mycobacterium tuberculosis H37Rv
分子名称: TRANSCRIPTIONAL REGULATORY PROTEIN (PROBABLY TETR-FAMILY), TRIETHYLENE GLYCOL
著者Gao, C, Bunker, R.D, ten Bokum, A, Kendall, S.L, Stoker, N.G, Lott, J.S, TB Structural Genomics Consortium (TBSGC)
登録日2010-04-21
公開日2011-04-27
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献The Structure of the Transcriptional Repressor KstR in Complex with CoA Thioester Cholesterol Metabolites Sheds Light on the Regulation of Cholesterol Catabolism in Mycobacterium tuberculosis.
J. Biol. Chem., 291, 2016
3ZQH
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BU of 3zqh by Molmil
Structure of Tetracycline repressor in complex with inducer peptide- TIP3
分子名称: 1,2-ETHANEDIOL, INDUCER PEPTIDE TIP3, TETRACYCLINE REPRESSOR PROTEIN CLASS B FROM TRANSPOSON TN10, ...
著者Sevvana, M, Goeke, D, Stoeckle, C, Kaspar, D, Grubmueller, S, Goetz, C, Wimmer, C, Berens, C, Klotzsche, M, Muller, Y.A, Hillen, W.
登録日2011-06-09
公開日2011-12-28
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献An Exclusive Alpha/Beta Code Directs Allostery in Tetr-Peptide Complexes.
J.Mol.Biol., 416, 2012
5Y2W
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BU of 5y2w by Molmil
Structure of Synechocystis PCC6803 CcmR regulatory domain in complex with 2-PG
分子名称: 2-PHOSPHOGLYCOLIC ACID, Rubisco operon transcriptional regulator
著者Jiang, Y.L, Wang, X.P, Sun, H, Cheng, W, Cao, D.D, Han, S.J, Li, W.F, Chen, Y, Zhou, C.Z.
登録日2017-07-27
公開日2017-12-27
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Coordinating carbon and nitrogen metabolic signaling through the cyanobacterial global repressor NdhR.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
2CE9
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BU of 2ce9 by Molmil
A WRPW peptide bound to the Groucho-TLE WD40 domain.
分子名称: TRANSDUCIN-LIKE ENHANCER PROTEIN 1, WRPW PEPTIDE
著者Pickles, L.M, Roe, S.M, Pearl, L.H.
登録日2006-02-03
公開日2006-06-14
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.12 Å)
主引用文献Molecular Recognition of Transcriptional Repressor Motifs by the Wd Domain of the Groucho/Tle Corepressor.
Mol.Cell, 22, 2006
4ZZL
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BU of 4zzl by Molmil
MexR R21W derepressor mutant causing multidrug resistance in P. aeruginosa by mexAB-oprM efflux pump expression
分子名称: GLYCEROL, MULTIDRUG RESISTANCE OPERON REPRESSOR
著者Anandapadamanaban, M, Pilstal, R, Ziauddin, J.M.E, Moche, M, Wallner, B, Sunnerhagen, M.
登録日2015-04-10
公開日2016-07-27
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.19 Å)
主引用文献Mutation-Induced Population Shift in the Mexr Conformational Ensemble Disengages DNA Binding: A Novel Mechanism for Marr Family Derepression.
Structure, 24, 2016
3JVD
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BU of 3jvd by Molmil
Crystal structure of putative transcription regulation repressor (LACI family) FROM Corynebacterium glutamicum
分子名称: GLYCEROL, SULFATE ION, Transcriptional regulators
著者Patskovsky, Y, Ramagopal, U, Toro, R, Foti, R, Freeman, J, Do, J, Sauder, J.M, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
登録日2009-09-16
公開日2009-09-22
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal structure of LACI family protein from Corynebacterium glutamicum
To be Published
3KMZ
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BU of 3kmz by Molmil
Crystal structure of RARalpha ligand binding domain in complex with the inverse agonist BMS493 and a corepressor fragment
分子名称: 4-{(E)-2-[5,5-dimethyl-8-(phenylethynyl)-5,6-dihydronaphthalen-2-yl]ethenyl}benzoic acid, GLYCEROL, Nuclear receptor corepressor 1, ...
著者Bourguet, W, le Maire, A.
登録日2009-11-11
公開日2010-06-02
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献A unique secondary-structure switch controls constitutive gene repression by retinoic acid receptor.
Nat.Struct.Mol.Biol., 17, 2010
5AIQ
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BU of 5aiq by Molmil
Crystal structure of ligand-free NadR
分子名称: TRANSCRIPTIONAL REGULATOR, MARR FAMILY
著者Liguori, A, Malito, E, Bottomley, M.J.
登録日2015-02-16
公開日2016-03-02
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.716 Å)
主引用文献Molecular Basis of Ligand-Dependent Regulation of Nadr, the Transcriptional Repressor of Meningococcal Virulence Factor Nada.
Plos Pathog., 12, 2016

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