PDB: 215264 件ウェブページステータス検索Chemie searchBIRD

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3GM6	Structure of the Thioalkalivibrio nitratireducens cytochrome c nitrite reductase in complex with phosphate 分子名称: (4R)-2-METHYLPENTANE-2,4-DIOL, (4S)-2-METHYL-2,4-PENTANEDIOL, CALCIUM ION, ... 著者 Trofimov, A.A, Polyakov, K.M, Boyko, K.M, Filimonenkov, A.A, Dorovatovsky, P.V, Tikhonova, T.V, Popov, V.O. 登録日 2009-03-13 公開日 2009-08-04 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Structure of octaheme cytochrome c nitrite reductase from Thioalkalivibrio nitratireducens in a complex with phosphate Crystallography Reports, 55, 2010
1YMC	THREE-DIMENSIONAL STRUCTURE OF CYANOMET-SULFMYOGLOBIN C 分子名称: CYANIDE ION, CYANOMET-SULFMYOGLOBIN, SULFATE ION, ... 著者 Evans, S.V, Brayer, G.D. 登録日 1993-09-27 公開日 1994-01-31 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Three-dimensional structure of cyanomet-sulfmyoglobin C. Proc.Natl.Acad.Sci.USA, 91, 1994
1DJH	PHOSPHOINOSITIDE-SPECIFIC PHOSPHOLIPASE C-DELTA1 FROM RAT COMPLEXED WITH BARIUM 分子名称: ACETATE ION, BARIUM ION, PHOSPHOINOSITIDE-SPECIFIC PHOSPHOLIPASE C, ... 著者 Essen, L.-O, Perisic, O, Williams, R.L. 登録日 1996-09-25 公開日 1997-07-07 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 A ternary metal binding site in the C2 domain of phosphoinositide-specific phospholipase C-delta1. Biochemistry, 36, 1997
1KXN	Crystal Structure of Cytochrome c Peroxidase with a Proposed Electron Transfer Pathway Excised to Form a Ligand Binding Channel. 分子名称: PROTOPORPHYRIN IX CONTAINING FE, cytochrome c peroxidase 著者 Rosenfeld, R.J, Hayes, A.M.A, Musah, R.A, Goodin, D.B. 登録日 2002-02-01 公開日 2002-03-06 最終更新日 2023-08-16 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Excision of a proposed electron transfer pathway in cytochrome c peroxidase and its replacement by a ligand-binding channel. Protein Sci., 11, 2002
1A1Q	HEPATITIS C VIRUS NS3 PROTEINASE 分子名称: NS3 PROTEINASE, ZINC ION 著者 Love, R.A, Parge, H.E, Wickersham, J.A, Hostomsky, Z, Habuka, N, Moomaw, E.W, Adachi, T, Hostomska, Z. 登録日 1997-12-12 公開日 1998-03-25 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 The crystal structure of hepatitis C virus NS3 proteinase reveals a trypsin-like fold and a structural zinc binding site. Cell(Cambridge,Mass.), 87, 1996
4BJA	Globin-like protein Glb-12 from C.elegans 分子名称: ACETATE ION, PROTEIN GLB-12, PROTOPORPHYRIN IX CONTAINING FE, ... 著者 De Henau, S, Tilleman, L, Germani, F, Pauwels, M, Vlaeminck, C, Vanfleteren, J.R, Bert, W, Pesce, A, Nardini, M, Bolognesi, M, De Wael, K, Moens, L, Dewilde, S, Braeckman, B.P. 登録日 2013-04-17 公開日 2014-05-07 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (1.65 Å) 主引用文献 A Redox Signalling Globin is Essential for Reproduction in Caenorhabditis Elegans. Nat.Commun., 6, 2015
4E35	Crystal structure of CFTR Associated Ligand (CAL) PDZ domain bound to iCAL36-L (ANSRWPTSIL) peptide 分子名称: GLYCEROL, Golgi-associated PDZ and coiled-coil motif-containing protein, iCAL50 peptide 著者 Amacher, J.F, Madden, D.R. 登録日 2012-03-09 公開日 2012-12-26 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (1.4 Å) 主引用文献 Stereochemical Determinants of C-terminal Specificity in PDZ Peptide-binding Domains: A NOVEL CONTRIBUTION OF THE CARBOXYLATE-BINDING LOOP. J.Biol.Chem., 288, 2013
4B4V	Crystal structure of Acinetobacter baumannii N5, N10- methylenetetrahydrofolate dehydrogenase-cyclohydrolase (FolD) complexed with NADP cofactor and inhibitor LY354899 分子名称: 4-(7-AMINO-9-HYDROXY-1-OXO-3,3A,4,5-TETRAHYDRO-2,5,6,8,9B-PENTAAZA-CYCLOPENTA[A]NAPHTHALEN-2-YL)-PHENYLCARBONYL-GLUTAMI C ACID, BIFUNCTIONAL PROTEIN FOLD, CHLORIDE ION, ... 著者 Eadsforth, T.C, Maluf, F.V, Hunter, W.N. 登録日 2012-08-01 公開日 2012-08-22 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Acinetobacter Baumannii Fold Ligand Complexes; Potent Inhibitors of Folate Metabolism and a Re-Evaluation of the Ly374571 Structure. FEBS J., 279, 2012
2PY9	Protein-RNA Interaction involving KH1 domain from Human Poly(C)-Binding Protein-2 分子名称: 12-mer C-rich strand of human telomeric RNA, Poly(rC)-binding protein 2 著者 James, T.L, Du, Z, Lee, J.K. 登録日 2007-05-15 公開日 2007-06-12 最終更新日 2011-07-13 実験手法 X-RAY DIFFRACTION (2.56 Å) 主引用文献 X-ray crystallographic and NMR studies of protein-protein and protein-nucleic acid interactions involving the KH domains from human poly(C)-binding protein-2. Rna, 13, 2007
4K0D	Periplasmic sensor domain of sensor histidine kinase, Adeh_2942 分子名称: ACETATE ION, CHLORIDE ION, Periplasmic sensor hybrid histidine kinase, ... 著者 Pokkuluri, P.R, Mack, J.C, Bearden, J, Rakowski, E, Schiffer, M, Joachimiak, A, Midwest Center for Structural Genomics (MCSG) 登録日 2013-04-03 公開日 2013-06-12 最終更新日 2015-04-15 実験手法 X-RAY DIFFRACTION (1.997 Å) 主引用文献 Analysis of periplasmic sensor domains from Anaeromyxobacter dehalogenans 2CP-C: structure of one sensor domain from a histidine kinase and another from a chemotaxis protein. Microbiologyopen, 2, 2013
4KAB	FOCAL ADHESION KINASE CATALYTIC DOMAIN IN COMPLEX WITH 3-Methyl-1,4-dihydro-pyrazolo[4,5-c]pyrazole 分子名称: 3-methyl-1,5-dihydropyrazolo[4,3-c]pyrazole, Focal adhesion kinase 1 著者 Musil, D, Graedler, U, Heinrich, T, Lehmann, M, Dresing, V. 登録日 2013-04-22 公開日 2013-09-11 最終更新日 2013-10-09 実験手法 X-RAY DIFFRACTION (2.71 Å) 主引用文献 Fragment-based discovery of focal adhesion kinase inhibitors. Bioorg.Med.Chem.Lett., 23, 2013
1Z1D	Structural Model for the interaction between RPA32 C-terminal domain and SV40 T antigen origin binding domain. 分子名称: Large T antigen, Replication protein A 32 kDa subunit 著者 Arunkumar, A.I, Klimovich, V, Jiang, X, Ott, R.D, Mizoue, L, Fanning, E, Chazin, W.J. 登録日 2005-03-03 公開日 2005-05-17 最終更新日 2024-05-22 実験手法 SOLUTION NMR 主引用文献 Insights into hRPA32 C-terminal domain--mediated assembly of the simian virus 40 replisome. Nat.Struct.Mol.Biol., 12, 2005
5Q0T	Ligand binding to FARNESOID-X-RECEPTOR 分子名称: 2-phenyl-N-(propan-2-yl)-6-[(thiophen-2-yl)sulfonyl]-4,5,6,7-tetrahydro-1H-pyrrolo[2,3-c]pyridine-1-carboxamide, Bile acid receptor, COACTIVATOR PEPTIDE SRC-1 HD3 著者 Rudolph, M.G, Benz, J, Burger, D, Thoma, R, Ruf, A, Joseph, C, Kuhn, B, Shao, C, Yang, H, Burley, S.K. 登録日 2017-05-31 公開日 2017-07-05 最終更新日 2024-05-22 実験手法 X-RAY DIFFRACTION (2.14 Å) 主引用文献 D3R Grand Challenge 2: blind prediction of protein-ligand poses, affinity rankings, and relative binding free energies. J. Comput. Aided Mol. Des., 32, 2018
1U96	Solution Structure of Yeast Cox17 with Copper Bound 分子名称: COPPER (I) ION, Cytochrome c oxidase copper chaperone 著者 Abajian, C, Yatsunyk, L.A, Ramirez, B.E, Rosenzweig, A.C. 登録日 2004-08-09 公開日 2004-10-05 最終更新日 2024-05-01 実験手法 SOLUTION NMR 主引用文献 Yeast cox17 solution structure and Copper(I) binding. J.Biol.Chem., 279, 2004
3F29	Structure of the Thioalkalivibrio nitratireducens cytochrome c nitrite reductase in complex with sulfite 分子名称: 1-(2-METHOXY-ETHOXY)-2-{2-[2-(2-METHOXY-ETHOXY]-ETHOXY}-ETHANE, CALCIUM ION, Eight-heme nitrite reductase, ... 著者 Trofimov, A.A, Polyakov, K.M, Boyko, K.M, Slutsky, A, Tikhonova, T.V, Antipov, A.N, Zvyagilskaya, R.A, Popov, A.N, Lamzin, V.S, Bourenkov, G.P, Popov, V.O. 登録日 2008-10-29 公開日 2008-12-09 最終更新日 2023-12-27 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Binding of sulfite by the Thioalkalivibrio nitratireducens cytochrome c nitrite reductase To be Published
1DJG	PHOSPHOINOSITIDE-SPECIFIC PHOSPHOLIPASE C-DELTA1 FROM RAT COMPLEXED WITH LANTHANUM 分子名称: ACETATE ION, LANTHANUM (III) ION, PHOSPHOINOSITIDE-SPECIFIC PHOSPHOLIPASE C, ... 著者 Essen, L.-O, Perisic, O, Williams, R.L. 登録日 1996-09-25 公開日 1997-07-07 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (2.6 Å) 主引用文献 A ternary metal binding site in the C2 domain of phosphoinositide-specific phospholipase C-delta1. Biochemistry, 36, 1997
4K8B	Crystal structure of HCV NS3/4A protease complexed with inhibitor 分子名称: N-(tert-butylcarbamoyl)-3-methyl-L-valyl-(4R)-N-[(1R,2S)-1-carboxy-2-ethenylcyclopropyl]-4-[(7-methoxy-2-phenylquinolin-4-yl)oxy]-L-prolinamide, NS3 protease, Nonstructural protein, ... 著者 Nar, H. 登録日 2013-04-18 公開日 2014-03-26 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 Ligand bioactive conformation plays a critical role in the design of drugs that target the hepatitis C virus NS3 protease. J.Med.Chem., 57, 2014
4MWF	Structure of Hepatitis C Virus Envelope Glycoprotein E2 core bound to broadly neutralizing antibody AR3C 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Envelope glycoprotein E2, ... 著者 Kong, L, Wilson, I.A, Law, M. 登録日 2013-09-24 公開日 2013-12-11 最終更新日 2020-07-29 実験手法 X-RAY DIFFRACTION (2.645 Å) 主引用文献 Hepatitis C virus e2 envelope glycoprotein core structure. Science, 342, 2013
2L04	The Solution Structure of the C-terminal Ig-like Domain of the Bacteriophage Lambda Tail Tube Protein 分子名称: Major tail protein V 著者 Pell, L.G, Gasmi-Seabrook, G.M.C, Donaldson, L.W, Howell, P, Davidson, A.R, Maxwell, K.L. 登録日 2010-06-30 公開日 2010-09-22 最終更新日 2024-05-01 実験手法 SOLUTION NMR 主引用文献 The Solution Structure of the C-Terminal Ig-like Domain of the Bacteriophage l Tail Tube Protein. J.Mol.Biol., 403, 2010
1ZC2	Crystal Structure of plasmid-encoded class C beta-lactamase CMY-2 complexed with citrate molecule 分子名称: CITRIC ACID, beta-lactamase class C 著者 Bauvois, C, Jacquamet, L, Fieulaine, S, Frere, J.-M, Galleni, M, Ferrer, J.-L. 登録日 2005-04-10 公開日 2006-04-25 最終更新日 2024-03-13 実験手法 X-RAY DIFFRACTION (2.09 Å) 主引用文献 Crystallographic structure of plasmid-encoded CMY-2 beta-lactamase revealed citrate molecule in the active site. To be Published
3Q0Y	N-terminal domain of C. reinhardtii SAS-6 homolog Bld12p 分子名称: Centriole protein 著者 Kitagawa, D, Vakonakis, I, Olieric, N, Hilbert, M, Keller, D, Olieric, V, Bortfeld, M, Erat, M.C, Flueckiger, I, Goenczy, P, Steinmetz, M.O. 登録日 2010-12-16 公開日 2011-02-09 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Structural basis of the 9-fold symmetry of centrioles. Cell(Cambridge,Mass.), 144, 2011
1UPD	Oxidized STRUCTURE OF CYTOCHROME C3 FROM DESULFOVIBRIO DESULFURICANS ATCC 27774 AT PH 7.6 分子名称: CYTOCHROME C3, HEME C 著者 Bento, I, Matias, P.M, Baptista, A.M, Da Costa, P.N, Van Dongen, W.M.A.M, Saraiva, L.M, Schneider, T.R, Soares, C.M, Carrondo, M.A. 登録日 2003-09-29 公開日 2004-09-30 最終更新日 2019-05-22 実験手法 X-RAY DIFFRACTION (1.4 Å) 主引用文献 Molecular Basis for Redox-Bohr and Cooperative Effects in Cytochrome C3 from Desulfovibrio Desulfuricans Atcc 27774: Crystallographic and Modeling Studies of Oxidized and Reduced High-Resolution Structures at Ph 7.6 Proteins, 54, 2004
1Z4U	hepatitis C virus NS5B RNA-dependent RNA polymerase complex with inhibitor PHA-00799585 分子名称: (2Z)-2-[(1-ADAMANTYLCARBONYL)AMINO]-3-[4-(2-BROMOPHENOXY)PHENYL]PROP-2-ENOIC ACID, CHLORIDE ION, GLYCEROL, ... 著者 Pfefferkorn, J.A, Greene, M, Nugent, R, Gross, R.J, Mitchell, M.A, Finzel, B.C, Harris, M.S, Wells, P.A, Shelly, J.A, Anstadt, R. 登録日 2005-03-16 公開日 2005-06-07 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 Inhibitors of HCV NS5B polymerase. Part 2: Evaluation of the northern region of (2Z)-2-benzoylamino-3-(4-phenoxy-phenyl)-acrylic acid Bioorg.Med.Chem.Lett., 15, 2005
2ZK7	Structure of a C-terminal deletion mutant of Thermoplasma acidophilum aldohexose dehydrogenase (AldT) 分子名称: Glucose 1-dehydrogenase related protein 著者 Nishioka, T, Yasutake, Y, Nishiya, Y, Tamura, N, Tamura, T. 登録日 2008-03-12 公開日 2009-01-13 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (2.71 Å) 主引用文献 C-terminal tail derived from the neighboring subunit is critical for the activity of Thermoplasma acidophilum D-aldohexose dehydrogenase Proteins, 74, 2009
1UP9	REDUCED STRUCTURE OF CYTOCHROME C3 FROM DESULFOVIBRIO DESULFURICANS ATCC 27774 AT PH 7.6 分子名称: CYTOCHROME C3, HEME C, SULFATE ION 著者 Bento, I, Matias, P.M, Baptista, A.M, Da Costa, P.N, Van Dongen, W.M.A.M, Saraiva, L.M, Schneider, T.R, Soares, C.M, Carrondo, M.A. 登録日 2003-09-29 公開日 2004-09-30 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (1.35 Å) 主引用文献 Molecular Basis for Redox-Bohr and Cooperative Effects in Cytochrome C3 from Desulfovibrio Desulfuricans Atcc 27774: Crystallographic and Modeling Studies of Oxidized and Reduced High-Resolution Structures at Ph 7.6 Proteins, 54, 2004

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