PDB: 1361 件ウェブページステータス検索Chemie searchBIRD

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7ZAG	Cryo-EM structure of a Pyrococcus abyssi 30S bound to Met-initiator tRNA,mRNA, aIF1A and the C-terminal domain of aIF5B. 分子名称: 30S ribosomal protein S10, 30S ribosomal protein S11, 30S ribosomal protein S12, ... 著者 Coureux, P.D, Bourgeois, G, Mechulam, Y, Schmitt, E, Kazan, R. 登録日 2022-03-22 公開日 2022-08-03 最終更新日 2024-04-24 実験手法 ELECTRON MICROSCOPY (2.77 Å) 主引用文献 Role of aIF5B in archaeal translation initiation. Nucleic Acids Res., 50, 2022
7ZAH	Cryo-EM structure of a Pyrococcus abyssi 30S bound to Met-initiator tRNA, mRNA, aIF1A and aIF5B 分子名称: 16S rRNA, 30S ribosomal protein S10, 30S ribosomal protein S11, ... 著者 Coureux, P.D, Bourgeois, G, Mechulam, Y, Schmitt, E, Kazan, R. 登録日 2022-03-22 公開日 2022-08-03 最終更新日 2024-04-24 実験手法 ELECTRON MICROSCOPY (2.7 Å) 主引用文献 Role of aIF5B in archaeal translation initiation. Nucleic Acids Res., 50, 2022
6S47	Saccharomyces cerevisiae 80S ribosome bound with ABCF protein New1 分子名称: 18S rRNA (1707-MER), 28S ribosomal RNA, 40S ribosomal protein S0-A, ... 著者 Kasari, V, Pochopien, A.A, Margus, T, Murina, V, Turnbull, K, Zhou, Y, Nissan, T, Graf, M, Novacek, J, Atkinson, G.C, Johansson, M.J.O, Wilson, D.N, Hauryliuk, V. 登録日 2019-06-26 公開日 2019-07-24 最終更新日 2019-10-23 実験手法 ELECTRON MICROSCOPY (3.28 Å) 主引用文献 A role for the Saccharomyces cerevisiae ABCF protein New1 in translation termination/recycling. Nucleic Acids Res., 47, 2019
6S0X	Erythromycin Resistant Staphylococcus aureus 70S ribosome (delta R88 A89 uL22) in complex with erythromycin. 分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ... 著者 Halfon, Y, Matozv, D, Eyal, Z, Bashan, A, Zimmerman, E, Kjeldgaard, J, Ingmer, H, Yonath, A. 登録日 2019-06-18 公開日 2019-08-21 実験手法 ELECTRON MICROSCOPY (2.425 Å) 主引用文献 Exit tunnel modulation as resistance mechanism of S. aureus erythromycin resistant mutant. Sci Rep, 9, 2019
3IEU	Crystal Structure of ERA in Complex with GDP 分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, GTP-binding protein era, GUANOSINE-5'-DIPHOSPHATE, ... 著者 Tu, C, Ji, X. 登録日 2009-07-23 公開日 2009-08-25 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 Structure of ERA in complex with the 3' end of 16S rRNA: implications for ribosome biogenesis Proc.Natl.Acad.Sci.USA, 106, 2009
7Z3N	Cryo-EM structure of the ribosome-associated RAC complex on the 80S ribosome - RAC-1 conformation 分子名称: 18S rRNA, 26S rRNA, 40S ribosomal protein S0, ... 著者 Kisonaite, M, Wild, K, Sinning, I. 登録日 2022-03-02 公開日 2023-04-12 最終更新日 2023-05-31 実験手法 ELECTRON MICROSCOPY (3.2 Å) 主引用文献 Structural inventory of cotranslational protein folding by the eukaryotic RAC complex. Nat.Struct.Mol.Biol., 30, 2023
7Z3O	Cryo-EM structure of the ribosome-associated RAC complex on the 80S ribosome - RAC-2 conformation 分子名称: 18S rRNA, 26S rRNA, 40S ribosomal protein S0, ... 著者 Kisonaite, M, Wild, K, Sinning, I. 登録日 2022-03-02 公開日 2023-04-12 最終更新日 2023-05-31 実験手法 ELECTRON MICROSCOPY (3.3 Å) 主引用文献 Structural inventory of cotranslational protein folding by the eukaryotic RAC complex. Nat.Struct.Mol.Biol., 30, 2023
3IEV	Crystal Structure of ERA in Complex with MgGNP and the 3' End of 16S rRNA 分子名称: 5'-R(P*AP*UP*CP*AP*CP*CP*UP*CP*CP*UP*UP*A)-3', GTP-binding protein era, MAGNESIUM ION, ... 著者 Tu, C, Ji, X. 登録日 2009-07-23 公開日 2009-08-25 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Structure of ERA in complex with the 3' end of 16S rRNA: implications for ribosome biogenesis Proc.Natl.Acad.Sci.USA, 106, 2009
7ZHG	High-resolution cryo-EM structure of Pyrococcus abyssi 30S ribosomal subunit bound to mRNA and initiator tRNA anticodon stem-loop 分子名称: 30S ribosomal protein S10, 30S ribosomal protein S11, 30S ribosomal protein S12, ... 著者 Kazan, R, Bourgeois, G, Mechulam, Y, Coureux, P.D, Schmitt, E. 登録日 2022-04-06 公開日 2022-06-29 最終更新日 2024-04-24 実験手法 ELECTRON MICROSCOPY (2.25 Å) 主引用文献 Role of aIF5B in archaeal translation initiation. Nucleic Acids Res., 50, 2022
6SKF	Cryo-EM Structure of T. kodakarensis 70S ribosome 分子名称: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ... 著者 Matzov, D, Sas-Chen, A, Thomas, J.M, Santangelo, T, Meier, J.L, Schwartz, S, Shalev-Benami, M. 登録日 2019-08-15 公開日 2020-07-29 最終更新日 2024-05-22 実験手法 ELECTRON MICROSCOPY (2.95 Å) 主引用文献 Dynamic RNA acetylation revealed by quantitative cross-evolutionary mapping. Nature, 583, 2020
7ZJX	Rabbit 80S ribosome programmed with SECIS and SBP2 分子名称: 18S rRNA, 28S rRNA, 40S Ribosomal protein eS19, ... 著者 Hilal, T, Simonovic, M, Spahn, C.M.T. 登録日 2022-04-12 公開日 2022-09-07 最終更新日 2024-04-24 実験手法 ELECTRON MICROSCOPY (3.1 Å) 主引用文献 Structure of the mammalian ribosome as it decodes the selenocysteine UGA codon. Science, 376, 2022
7ZW0	FAP-80S Complex - Rotated state 分子名称: 18S ribosomal RNA (RDN18-1), 25S ribosomal RNA (RDN25-1), 40S ribosomal protein S0-A, ... 著者 Ikeuchi, K, Buschauer, R, Berninghausen, O, Becker, T, Beckmann, R. 登録日 2022-05-17 公開日 2022-10-05 実験手法 ELECTRON MICROSCOPY (2.4 Å) 主引用文献 Sensing of individual stalled 80S ribosomes by Fap1 for nonfunctional rRNA turnover. Mol.Cell, 82, 2022
6SPF	Pseudomonas aeruginosa 70s ribosome from an aminoglycoside resistant clinical isolate 分子名称: 16S rRNA, 30S ribosomal protein S10, 30S ribosomal protein S11, ... 著者 Halfon, Y, Jimenez-Fernande, A, La Ros, R, Espinos, R, Krogh Johansen, H, Matzov, D, Eyal, Z, Bashan, A, Zimmerman, E, Belousoff, M, Molin, S, Yonath, A. 登録日 2019-09-01 公開日 2019-10-23 最終更新日 2020-07-29 実験手法 ELECTRON MICROSCOPY (2.89 Å) 主引用文献 Structure ofPseudomonas aeruginosaribosomes from an aminoglycoside-resistant clinical isolate. Proc.Natl.Acad.Sci.USA, 116, 2019
7ZJW	Rabbit 80S ribosome as it decodes the Sec-UGA codon 分子名称: 18S rRNA, 28S rRNA, 40S Ribosomal protein eS19, ... 著者 Hilal, T, Simonovic, M, Spahn, C.M.T. 登録日 2022-04-12 公開日 2022-10-19 最終更新日 2024-04-24 実験手法 ELECTRON MICROSCOPY (2.8 Å) 主引用文献 Structure of the mammalian ribosome as it decodes the selenocysteine UGA codon. Science, 376, 2022
6SZS	Release factor-dependent ribosome rescue by BrfA in the Gram-positive bacterium Bacillus subtilis 分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ... 著者 Muller, C, Beckert, B, Wilson, D.N. 登録日 2019-10-02 公開日 2019-12-04 最終更新日 2024-05-22 実験手法 ELECTRON MICROSCOPY (3.06 Å) 主引用文献 Release factor-dependent ribosome rescue by BrfA in the Gram-positive bacterium Bacillus subtilis. Nat Commun, 10, 2019
6SPE	Pseudomonas aeruginosa 30s ribosome from a clinical isolate 分子名称: 16S ribosomal RNA, 30S ribosomal protein S10, 30S ribosomal protein S11, ... 著者 Halfon, Y, Jimenez-Fernande, A, La Ros, R, Espinos, R, Krogh Johansen, H, Matzov, D, Eyal, Z, Bashan, A, Zimmerman, E, Belousoff, M, Molin, S, Yonath, A. 登録日 2019-09-01 公開日 2019-10-16 最終更新日 2019-11-06 実験手法 ELECTRON MICROSCOPY (3.6 Å) 主引用文献 Structure ofPseudomonas aeruginosaribosomes from an aminoglycoside-resistant clinical isolate. Proc.Natl.Acad.Sci.USA, 116, 2019
6SPC	Pseudomonas aeruginosa 30s ribosome from an aminoglycoside resistant clinical isolate 分子名称: 16S rRNA, 30S ribosomal protein S10, 30S ribosomal protein S11, ... 著者 Halfon, Y, Jimenez-Fernande, A, La Ros, R, Espinos, R, Krogh Johansen, H, Matzov, D, Eyal, Z, Bashan, A, Zimmerman, E, Belousoff, M, Molin, S, Yonath, A. 登録日 2019-09-01 公開日 2019-10-16 最終更新日 2019-11-06 実験手法 ELECTRON MICROSCOPY (2.95 Å) 主引用文献 Structure ofPseudomonas aeruginosaribosomes from an aminoglycoside-resistant clinical isolate. Proc.Natl.Acad.Sci.USA, 116, 2019
7ZTA	Structure of an Escherichia coli 70S ribosome stalled by Tetracenomycin X during translation of an MAAAPQK(C) peptide 分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ... 著者 Leroy, E.C, Perry, T.N, Renault, T.T, Innis, C.A. 登録日 2022-05-09 公開日 2023-04-12 最終更新日 2024-04-24 実験手法 ELECTRON MICROSCOPY (2.7 Å) 主引用文献 Tetracenomycin X sequesters peptidyl-tRNA during translation of QK motifs. Nat.Chem.Biol., 19, 2023
3J77	Structures of yeast 80S ribosome-tRNA complexes in the rotated and non-rotated conformations (Class II - rotated ribosome with 1 tRNA) 分子名称: 18S ribosomal RNA, 25S ribosomal RNA, 40S ribosomal protein S0, ... 著者 Svidritskiy, E, Brilot, A.F, Koh, C.S, Grigorieff, N, Korostelev, A.A. 登録日 2014-05-29 公開日 2014-08-06 最終更新日 2024-02-21 実験手法 ELECTRON MICROSCOPY (6.2 Å) 主引用文献 Structures of Yeast 80S Ribosome-tRNA Complexes in the Rotated and Nonrotated Conformations. Structure, 22, 2014
3JA1	Activation of GTP Hydrolysis in mRNA-tRNA Translocation by Elongation Factor G 分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ... 著者 Li, W, Liu, Z, Koripella, R.K, Langlois, R, Sanyal, S, Frank, J. 登録日 2015-03-30 公開日 2015-07-01 最終更新日 2024-02-21 実験手法 ELECTRON MICROSCOPY (3.6 Å) 主引用文献 Activation of GTP hydrolysis in mRNA-tRNA translocation by elongation factor G. Sci Adv, 1, 2015
6SV4	The cryo-EM structure of SDD1-stalled collided trisome. 分子名称: 18S rRNA, 25S rRNA, 40S ribosomal protein S0-A, ... 著者 Tesina, P, Buschauer, R, Cheng, J, Becker, T, Beckmann, R. 登録日 2019-09-17 公開日 2020-03-04 最終更新日 2020-04-22 実験手法 ELECTRON MICROSCOPY (3.3 Å) 主引用文献 RQT complex dissociates ribosomes collided on endogenous RQC substrate SDD1. Nat.Struct.Mol.Biol., 27, 2020
6SNT	Yeast 80S ribosome stalled on SDD1 mRNA. 分子名称: 40S ribosomal protein S0-A, 40S ribosomal protein S1-A, 40S ribosomal protein S10-A, ... 著者 Tesina, P, Buschauer, R, Cheng, J, Becker, T, Beckmann, R. 登録日 2019-08-27 公開日 2020-03-04 最終更新日 2020-04-22 実験手法 ELECTRON MICROSCOPY (2.8 Å) 主引用文献 RQT complex dissociates ribosomes collided on endogenous RQC substrate SDD1. Nat.Struct.Mol.Biol., 27, 2020
6SW9	IC2A model of cryo-EM structure of a full archaeal ribosomal translation initiation complex devoid of aIF1 in P. abyssi 分子名称: 16S ribosomal RNA, 30S ribosomal protein S10, 30S ribosomal protein S11, ... 著者 Coureux, P.-D, Mechulam, Y, Schmitt, E. 登録日 2019-09-20 公開日 2020-02-19 最終更新日 2024-04-24 実験手法 ELECTRON MICROSCOPY (4.2 Å) 主引用文献 Cryo-EM study of an archaeal 30S initiation complex gives insights into evolution of translation initiation. Commun Biol, 3, 2020
3J7R	Structure of the translating mammalian ribosome-Sec61 complex 分子名称: 18S ribosomal RNA, 28S ribosomal RNA, 5.8S ribosomal RNA, ... 著者 Voorhees, R.M, Fernandez, I.S, Scheres, S.H.W, Hegde, R.S. 登録日 2014-08-01 公開日 2014-09-03 最終更新日 2019-10-30 実験手法 ELECTRON MICROSCOPY (3.9 Å) 主引用文献 Structure of the Mammalian ribosome-sec61 complex to 3.4 a resolution. Cell(Cambridge,Mass.), 157, 2014
8A3L	Structural insights into the binding of bS1 to the ribosome 分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S1, ... 著者 D'Urso, G, Chat, S, Gillet, R, Giudice, E. 登録日 2022-06-08 公開日 2023-05-10 最終更新日 2024-04-24 実験手法 ELECTRON MICROSCOPY (3.42 Å) 主引用文献 Structural insights into the binding of bS1 to the ribosome. Nucleic Acids Res., 51, 2023

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