Yeast 80S ribosome stalled on SDD1 mRNA.

This is a large structure.

Summary for 6SNT

EMDB information10262
DescriptorSaccharomyces cerevisiae S288C 18S ribosomal RNA (RDN18-1), rRNA, 40S ribosomal protein S0-A, 40S ribosomal protein S1-A, ... (83 entities in total)
Functional Keywords80s, stalling, sdd1, translation
Biological sourceSaccharomyces cerevisiae
Total number of polymer chains81
Total molecular weight3165148.34
Tesina, P.,Buschauer, R.,Cheng, J.,Becker, T.,Beckmann, R. (deposition date: 2019-08-27, release date: 2020-03-04, Last modification date: 2020-04-01)
Primary citation
Matsuo, Y.,Tesina, P.,Nakajima, S.,Mizuno, M.,Endo, A.,Buschauer, R.,Cheng, J.,Shounai, O.,Ikeuchi, K.,Saeki, Y.,Becker, T.,Beckmann, R.,Inada, T.
RQT complex dissociates ribosomes collided on endogenous RQC substrate SDD1.
Nat.Struct.Mol.Biol., 2020
PubMed: 32203490 (PDB entries with the same primary citation)
DOI: 10.1038/s41594-020-0393-9
MImport into Mendeley
Experimental method

Structure validation

ClashscoreRamachandran outliersSidechain outliersRNA backbone3 0.6% 0.5% 0.54MetricValuePercentile RanksWorseBetterPercentile relative to all structuresPercentile relative to all EM structures
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