Summary Structural details Experimental details Functional details Sequence Neighbor History Downloads

6SNT

Yeast 80S ribosome stalled on SDD1 mRNA.

This is a non-PDB format compatible entry.

Functional Information from GO Data

Chain	GOid	namespace	contents
A	0000028	biological_process	ribosomal small subunit assembly
A	0000054	biological_process	ribosomal subunit export from nucleus
A	0000447	biological_process	endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
A	0000461	biological_process	endonucleolytic cleavage to generate mature 3'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
A	0002181	biological_process	cytoplasmic translation
A	0003735	molecular_function	structural constituent of ribosome
A	0005737	cellular_component	cytoplasm
A	0005829	cellular_component	cytosol
A	0005840	cellular_component	ribosome
A	0006364	biological_process	rRNA processing
A	0006412	biological_process	translation
A	0010494	cellular_component	cytoplasmic stress granule
A	0015935	cellular_component	small ribosomal subunit
A	0022627	cellular_component	cytosolic small ribosomal subunit
A	0030686	cellular_component	90S preribosome
A	0042254	biological_process	ribosome biogenesis
A	1990904	cellular_component	ribonucleoprotein complex
AB	0002181	biological_process	cytoplasmic translation
AB	0003735	molecular_function	structural constituent of ribosome
AB	0005737	cellular_component	cytoplasm
AB	0005829	cellular_component	cytosol
AB	0005840	cellular_component	ribosome
AB	0006412	biological_process	translation
AB	0022625	cellular_component	cytosolic large ribosomal subunit
AB	0070180	molecular_function	large ribosomal subunit rRNA binding
AB	1990904	cellular_component	ribonucleoprotein complex
B	0000462	biological_process	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
B	0002181	biological_process	cytoplasmic translation
B	0003735	molecular_function	structural constituent of ribosome
B	0005737	cellular_component	cytoplasm
B	0005829	cellular_component	cytosol
B	0005840	cellular_component	ribosome
B	0006412	biological_process	translation
B	0022627	cellular_component	cytosolic small ribosomal subunit
B	0030686	cellular_component	90S preribosome
B	1990904	cellular_component	ribonucleoprotein complex
C	0000054	biological_process	ribosomal subunit export from nucleus
C	0002181	biological_process	cytoplasmic translation
C	0003723	molecular_function	RNA binding
C	0003735	molecular_function	structural constituent of ribosome
C	0005515	molecular_function	protein binding
C	0005634	cellular_component	nucleus
C	0005654	cellular_component	nucleoplasm
C	0005730	cellular_component	nucleolus
C	0005737	cellular_component	cytoplasm
C	0005829	cellular_component	cytosol
C	0005840	cellular_component	ribosome
C	0006364	biological_process	rRNA processing
C	0006412	biological_process	translation
C	0015935	cellular_component	small ribosomal subunit
C	0022627	cellular_component	cytosolic small ribosomal subunit
C	0032040	cellular_component	small-subunit processome
C	0042254	biological_process	ribosome biogenesis
C	0045903	biological_process	positive regulation of translational fidelity
C	0070181	molecular_function	small ribosomal subunit rRNA binding
C	1990904	cellular_component	ribonucleoprotein complex
D	0000054	biological_process	ribosomal subunit export from nucleus
D	0000056	biological_process	ribosomal small subunit export from nucleus
D	0002181	biological_process	cytoplasmic translation
D	0003723	molecular_function	RNA binding
D	0003735	molecular_function	structural constituent of ribosome
D	0003906	molecular_function	DNA-(apurinic or apyrimidinic site) endonuclease activity
D	0005515	molecular_function	protein binding
D	0005634	cellular_component	nucleus
D	0005737	cellular_component	cytoplasm
D	0005829	cellular_component	cytosol
D	0005840	cellular_component	ribosome
D	0006412	biological_process	translation
D	0015935	cellular_component	small ribosomal subunit
D	0022626	cellular_component	cytosolic ribosome
D	0022627	cellular_component	cytosolic small ribosomal subunit
D	0030686	cellular_component	90S preribosome
D	0030688	cellular_component	preribosome, small subunit precursor
D	1990904	cellular_component	ribonucleoprotein complex
D	2001235	biological_process	positive regulation of apoptotic signaling pathway
E	0002181	biological_process	cytoplasmic translation
E	0003723	molecular_function	RNA binding
E	0003735	molecular_function	structural constituent of ribosome
E	0005737	cellular_component	cytoplasm
E	0005829	cellular_component	cytosol
E	0005840	cellular_component	ribosome
E	0006412	biological_process	translation
E	0019843	molecular_function	rRNA binding
E	0022627	cellular_component	cytosolic small ribosomal subunit
E	0030686	cellular_component	90S preribosome
E	0032991	cellular_component	protein-containing complex
E	0043229	cellular_component	intracellular organelle
E	1990904	cellular_component	ribonucleoprotein complex
F	0000028	biological_process	ribosomal small subunit assembly
F	0000054	biological_process	ribosomal subunit export from nucleus
F	0002181	biological_process	cytoplasmic translation
F	0003723	molecular_function	RNA binding
F	0003729	molecular_function	mRNA binding
F	0003735	molecular_function	structural constituent of ribosome
F	0005515	molecular_function	protein binding
F	0005737	cellular_component	cytoplasm
F	0005829	cellular_component	cytosol
F	0005840	cellular_component	ribosome
F	0006412	biological_process	translation
F	0006450	biological_process	regulation of translational fidelity
F	0015935	cellular_component	small ribosomal subunit
F	0019843	molecular_function	rRNA binding
F	0022627	cellular_component	cytosolic small ribosomal subunit
F	0030686	cellular_component	90S preribosome
F	1990904	cellular_component	ribonucleoprotein complex
G	0000462	biological_process	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
G	0003735	molecular_function	structural constituent of ribosome
G	0005634	cellular_component	nucleus
G	0005654	cellular_component	nucleoplasm
G	0005730	cellular_component	nucleolus
G	0005737	cellular_component	cytoplasm
G	0005829	cellular_component	cytosol
G	0005840	cellular_component	ribosome
G	0006364	biological_process	rRNA processing
G	0006412	biological_process	translation
G	0022627	cellular_component	cytosolic small ribosomal subunit
G	0030686	cellular_component	90S preribosome
G	0032040	cellular_component	small-subunit processome
G	0042254	biological_process	ribosome biogenesis
G	1990904	cellular_component	ribonucleoprotein complex
H	0002181	biological_process	cytoplasmic translation
H	0003735	molecular_function	structural constituent of ribosome
H	0005634	cellular_component	nucleus
H	0005654	cellular_component	nucleoplasm
H	0005730	cellular_component	nucleolus
H	0005737	cellular_component	cytoplasm
H	0005829	cellular_component	cytosol
H	0005840	cellular_component	ribosome
H	0006364	biological_process	rRNA processing
H	0006412	biological_process	translation
H	0022627	cellular_component	cytosolic small ribosomal subunit
H	0030686	cellular_component	90S preribosome
H	0032040	cellular_component	small-subunit processome
H	0042254	biological_process	ribosome biogenesis
H	0042274	biological_process	ribosomal small subunit biogenesis
H	1990904	cellular_component	ribonucleoprotein complex
I	0000462	biological_process	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
I	0003735	molecular_function	structural constituent of ribosome
I	0005737	cellular_component	cytoplasm
I	0005829	cellular_component	cytosol
I	0005840	cellular_component	ribosome
I	0006412	biological_process	translation
I	0022627	cellular_component	cytosolic small ribosomal subunit
I	0030686	cellular_component	90S preribosome
I	1990904	cellular_component	ribonucleoprotein complex
J	0000462	biological_process	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
J	0003723	molecular_function	RNA binding
J	0003735	molecular_function	structural constituent of ribosome
J	0005634	cellular_component	nucleus
J	0005654	cellular_component	nucleoplasm
J	0005730	cellular_component	nucleolus
J	0005737	cellular_component	cytoplasm
J	0005829	cellular_component	cytosol
J	0005840	cellular_component	ribosome
J	0006364	biological_process	rRNA processing
J	0006412	biological_process	translation
J	0015935	cellular_component	small ribosomal subunit
J	0019843	molecular_function	rRNA binding
J	0022627	cellular_component	cytosolic small ribosomal subunit
J	0030686	cellular_component	90S preribosome
J	0032040	cellular_component	small-subunit processome
J	0042254	biological_process	ribosome biogenesis
J	0042274	biological_process	ribosomal small subunit biogenesis
J	0043226	cellular_component	organelle
J	1990904	cellular_component	ribonucleoprotein complex
K	0000054	biological_process	ribosomal subunit export from nucleus
K	0002181	biological_process	cytoplasmic translation
K	0003723	molecular_function	RNA binding
K	0003735	molecular_function	structural constituent of ribosome
K	0005515	molecular_function	protein binding
K	0005737	cellular_component	cytoplasm
K	0005829	cellular_component	cytosol
K	0005840	cellular_component	ribosome
K	0022627	cellular_component	cytosolic small ribosomal subunit
K	0034198	biological_process	cellular response to amino acid starvation
K	0045860	biological_process	positive regulation of protein kinase activity
K	1990904	cellular_component	ribonucleoprotein complex
L	0000028	biological_process	ribosomal small subunit assembly
L	0000462	biological_process	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
L	0003723	molecular_function	RNA binding
L	0003735	molecular_function	structural constituent of ribosome
L	0005737	cellular_component	cytoplasm
L	0005829	cellular_component	cytosol
L	0005840	cellular_component	ribosome
L	0006412	biological_process	translation
L	0019843	molecular_function	rRNA binding
L	0022627	cellular_component	cytosolic small ribosomal subunit
L	0030686	cellular_component	90S preribosome
L	1990904	cellular_component	ribonucleoprotein complex
M	0002181	biological_process	cytoplasmic translation
M	0003735	molecular_function	structural constituent of ribosome
M	0005737	cellular_component	cytoplasm
M	0005829	cellular_component	cytosol
M	0005840	cellular_component	ribosome
M	0006412	biological_process	translation
M	0022627	cellular_component	cytosolic small ribosomal subunit
M	0042274	biological_process	ribosomal small subunit biogenesis
M	1990145	biological_process	maintenance of translational fidelity
M	1990904	cellular_component	ribonucleoprotein complex
N	0000462	biological_process	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
N	0002181	biological_process	cytoplasmic translation
N	0003735	molecular_function	structural constituent of ribosome
N	0005730	cellular_component	nucleolus
N	0005737	cellular_component	cytoplasm
N	0005829	cellular_component	cytosol
N	0005840	cellular_component	ribosome
N	0006412	biological_process	translation
N	0022627	cellular_component	cytosolic small ribosomal subunit
N	0030686	cellular_component	90S preribosome
N	0070181	molecular_function	small ribosomal subunit rRNA binding
N	1990904	cellular_component	ribonucleoprotein complex
NC	0003674	molecular_function	molecular_function
NC	0005575	cellular_component	cellular_component
NC	0008150	biological_process	biological_process
O	0000028	biological_process	ribosomal small subunit assembly
O	0000462	biological_process	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
O	0002181	biological_process	cytoplasmic translation
O	0003729	molecular_function	mRNA binding
O	0003735	molecular_function	structural constituent of ribosome
O	0005634	cellular_component	nucleus
O	0005654	cellular_component	nucleoplasm
O	0005730	cellular_component	nucleolus
O	0005737	cellular_component	cytoplasm
O	0005829	cellular_component	cytosol
O	0005840	cellular_component	ribosome
O	0006364	biological_process	rRNA processing
O	0006412	biological_process	translation
O	0022627	cellular_component	cytosolic small ribosomal subunit
O	0030686	cellular_component	90S preribosome
O	0032040	cellular_component	small-subunit processome
O	0042254	biological_process	ribosome biogenesis
O	1990904	cellular_component	ribonucleoprotein complex
P	0000028	biological_process	ribosomal small subunit assembly
P	0000054	biological_process	ribosomal subunit export from nucleus
P	0002181	biological_process	cytoplasmic translation
P	0003723	molecular_function	RNA binding
P	0003735	molecular_function	structural constituent of ribosome
P	0005737	cellular_component	cytoplasm
P	0005829	cellular_component	cytosol
P	0005840	cellular_component	ribosome
P	0006412	biological_process	translation
P	0015935	cellular_component	small ribosomal subunit
P	0022627	cellular_component	cytosolic small ribosomal subunit
P	0042254	biological_process	ribosome biogenesis
P	1990904	cellular_component	ribonucleoprotein complex
Q	0000462	biological_process	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
Q	0003723	molecular_function	RNA binding
Q	0003735	molecular_function	structural constituent of ribosome
Q	0005737	cellular_component	cytoplasm
Q	0005829	cellular_component	cytosol
Q	0005840	cellular_component	ribosome
Q	0006412	biological_process	translation
Q	0022627	cellular_component	cytosolic small ribosomal subunit
Q	0030686	cellular_component	90S preribosome
Q	1990904	cellular_component	ribonucleoprotein complex
R	0000028	biological_process	ribosomal small subunit assembly
R	0002181	biological_process	cytoplasmic translation
R	0003735	molecular_function	structural constituent of ribosome
R	0005737	cellular_component	cytoplasm
R	0005829	cellular_component	cytosol
R	0005840	cellular_component	ribosome
R	0006412	biological_process	translation
R	0022627	cellular_component	cytosolic small ribosomal subunit
R	1990904	cellular_component	ribonucleoprotein complex
S	0000054	biological_process	ribosomal subunit export from nucleus
S	0000447	biological_process	endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
S	0002181	biological_process	cytoplasmic translation
S	0003676	molecular_function	nucleic acid binding
S	0003723	molecular_function	RNA binding
S	0003735	molecular_function	structural constituent of ribosome
S	0005737	cellular_component	cytoplasm
S	0005739	cellular_component	mitochondrion
S	0005829	cellular_component	cytosol
S	0005840	cellular_component	ribosome
S	0006412	biological_process	translation
S	0015935	cellular_component	small ribosomal subunit
S	0019843	molecular_function	rRNA binding
S	0022627	cellular_component	cytosolic small ribosomal subunit
S	1990904	cellular_component	ribonucleoprotein complex
T	0000028	biological_process	ribosomal small subunit assembly
T	0000054	biological_process	ribosomal subunit export from nucleus
T	0003723	molecular_function	RNA binding
T	0003735	molecular_function	structural constituent of ribosome
T	0005737	cellular_component	cytoplasm
T	0005829	cellular_component	cytosol
T	0005840	cellular_component	ribosome
T	0006412	biological_process	translation
T	0022627	cellular_component	cytosolic small ribosomal subunit
T	0042254	biological_process	ribosome biogenesis
T	0042274	biological_process	ribosomal small subunit biogenesis
T	1990904	cellular_component	ribonucleoprotein complex
U	0000462	biological_process	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
U	0002181	biological_process	cytoplasmic translation
U	0003723	molecular_function	RNA binding
U	0003729	molecular_function	mRNA binding
U	0003735	molecular_function	structural constituent of ribosome
U	0005737	cellular_component	cytoplasm
U	0005829	cellular_component	cytosol
U	0005840	cellular_component	ribosome
U	0006412	biological_process	translation
U	0015935	cellular_component	small ribosomal subunit
U	0022627	cellular_component	cytosolic small ribosomal subunit
U	1990904	cellular_component	ribonucleoprotein complex
V	0000447	biological_process	endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
V	0000461	biological_process	endonucleolytic cleavage to generate mature 3'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
V	0003735	molecular_function	structural constituent of ribosome
V	0005737	cellular_component	cytoplasm
V	0005829	cellular_component	cytosol
V	0005840	cellular_component	ribosome
V	0006364	biological_process	rRNA processing
V	0006412	biological_process	translation
V	0022627	cellular_component	cytosolic small ribosomal subunit
V	1990904	cellular_component	ribonucleoprotein complex
W	0002181	biological_process	cytoplasmic translation
W	0003735	molecular_function	structural constituent of ribosome
W	0005737	cellular_component	cytoplasm
W	0005829	cellular_component	cytosol
W	0005840	cellular_component	ribosome
W	0006412	biological_process	translation
W	0022627	cellular_component	cytosolic small ribosomal subunit
W	1990904	cellular_component	ribonucleoprotein complex
X	0000462	biological_process	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
X	0003735	molecular_function	structural constituent of ribosome
X	0005737	cellular_component	cytoplasm
X	0005829	cellular_component	cytosol
X	0005840	cellular_component	ribosome
X	0006412	biological_process	translation
X	0006450	biological_process	regulation of translational fidelity
X	0015935	cellular_component	small ribosomal subunit
X	0022627	cellular_component	cytosolic small ribosomal subunit
X	1990145	biological_process	maintenance of translational fidelity
X	1990904	cellular_component	ribonucleoprotein complex
Y	0000462	biological_process	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
Y	0002181	biological_process	cytoplasmic translation
Y	0003735	molecular_function	structural constituent of ribosome
Y	0005737	cellular_component	cytoplasm
Y	0005739	cellular_component	mitochondrion
Y	0005829	cellular_component	cytosol
Y	0005840	cellular_component	ribosome
Y	0006412	biological_process	translation
Y	0022627	cellular_component	cytosolic small ribosomal subunit
Y	1990904	cellular_component	ribonucleoprotein complex
Z	0002181	biological_process	cytoplasmic translation
Z	0003735	molecular_function	structural constituent of ribosome
Z	0005737	cellular_component	cytoplasm
Z	0005829	cellular_component	cytosol
Z	0005840	cellular_component	ribosome
Z	0022627	cellular_component	cytosolic small ribosomal subunit
Z	1990904	cellular_component	ribonucleoprotein complex
a	0000054	biological_process	ribosomal subunit export from nucleus
a	0002181	biological_process	cytoplasmic translation
a	0003729	molecular_function	mRNA binding
a	0003735	molecular_function	structural constituent of ribosome
a	0005515	molecular_function	protein binding
a	0005737	cellular_component	cytoplasm
a	0005829	cellular_component	cytosol
a	0005840	cellular_component	ribosome
a	0006412	biological_process	translation
a	0008270	molecular_function	zinc ion binding
a	0022627	cellular_component	cytosolic small ribosomal subunit
a	0042255	biological_process	ribosome assembly
a	1990904	cellular_component	ribonucleoprotein complex
aa	0002181	biological_process	cytoplasmic translation
aa	0003735	molecular_function	structural constituent of ribosome
aa	0005737	cellular_component	cytoplasm
aa	0005829	cellular_component	cytosol
aa	0005840	cellular_component	ribosome
aa	0006412	biological_process	translation
aa	0022625	cellular_component	cytosolic large ribosomal subunit
aa	0044391	cellular_component	ribosomal subunit
aa	0046872	molecular_function	metal ion binding
aa	0070180	molecular_function	large ribosomal subunit rRNA binding
aa	1990904	cellular_component	ribonucleoprotein complex
ab	0002181	biological_process	cytoplasmic translation
ab	0003735	molecular_function	structural constituent of ribosome
ab	0005737	cellular_component	cytoplasm
ab	0005829	cellular_component	cytosol
ab	0005840	cellular_component	ribosome
ab	0006412	biological_process	translation
ab	0008270	molecular_function	zinc ion binding
ab	0022625	cellular_component	cytosolic large ribosomal subunit
ab	0044391	cellular_component	ribosomal subunit
ab	0046677	biological_process	response to antibiotic
ab	0046898	biological_process	response to cycloheximide
ab	1990904	cellular_component	ribonucleoprotein complex
ac	0003735	molecular_function	structural constituent of ribosome
ac	0005840	cellular_component	ribosome
ac	0006412	biological_process	translation
ad	0000027	biological_process	ribosomal large subunit assembly
ad	0000055	biological_process	ribosomal large subunit export from nucleus
ad	0002181	biological_process	cytoplasmic translation
ad	0003735	molecular_function	structural constituent of ribosome
ad	0005634	cellular_component	nucleus
ad	0005737	cellular_component	cytoplasm
ad	0005829	cellular_component	cytosol
ad	0005840	cellular_component	ribosome
ad	0006412	biological_process	translation
ad	0008270	molecular_function	zinc ion binding
ad	0016567	biological_process	protein ubiquitination
ad	0019941	biological_process	modification-dependent protein catabolic process
ad	0022625	cellular_component	cytosolic large ribosomal subunit
ad	0031386	molecular_function	protein tag activity
ad	0031625	molecular_function	ubiquitin protein ligase binding
ad	0042254	biological_process	ribosome biogenesis
ad	1990904	cellular_component	ribonucleoprotein complex
ae	0002181	biological_process	cytoplasmic translation
ae	0003735	molecular_function	structural constituent of ribosome
ae	0005515	molecular_function	protein binding
ae	0005737	cellular_component	cytoplasm
ae	0005829	cellular_component	cytosol
ae	0005840	cellular_component	ribosome
ae	0006412	biological_process	translation
ae	0022625	cellular_component	cytosolic large ribosomal subunit
ae	1990904	cellular_component	ribonucleoprotein complex
af	0002181	biological_process	cytoplasmic translation
af	0003735	molecular_function	structural constituent of ribosome
af	0005737	cellular_component	cytoplasm
af	0005829	cellular_component	cytosol
af	0005840	cellular_component	ribosome
af	0006412	biological_process	translation
af	0022618	biological_process	protein-RNA complex assembly
af	0022625	cellular_component	cytosolic large ribosomal subunit
af	1990904	cellular_component	ribonucleoprotein complex
ag	0000448	biological_process	cleavage in ITS2 between 5.8S rRNA and LSU-rRNA of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
ag	0002181	biological_process	cytoplasmic translation
ag	0003723	molecular_function	RNA binding
ag	0003735	molecular_function	structural constituent of ribosome
ag	0005737	cellular_component	cytoplasm
ag	0005829	cellular_component	cytosol
ag	0005840	cellular_component	ribosome
ag	0006412	biological_process	translation
ag	0008270	molecular_function	zinc ion binding
ag	0019843	molecular_function	rRNA binding
ag	0022625	cellular_component	cytosolic large ribosomal subunit
ag	0030687	cellular_component	preribosome, large subunit precursor
ag	0044391	cellular_component	ribosomal subunit
ag	0046872	molecular_function	metal ion binding
ag	1990904	cellular_component	ribonucleoprotein complex
ah	0002181	biological_process	cytoplasmic translation
ah	0003723	molecular_function	RNA binding
ah	0003735	molecular_function	structural constituent of ribosome
ah	0005737	cellular_component	cytoplasm
ah	0005829	cellular_component	cytosol
ah	0005840	cellular_component	ribosome
ah	0006412	biological_process	translation
ah	0022625	cellular_component	cytosolic large ribosomal subunit
ah	1990904	cellular_component	ribonucleoprotein complex
ai	0000463	biological_process	maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
ai	0002181	biological_process	cytoplasmic translation
ai	0003729	molecular_function	mRNA binding
ai	0003735	molecular_function	structural constituent of ribosome
ai	0005737	cellular_component	cytoplasm
ai	0005829	cellular_component	cytosol
ai	0005840	cellular_component	ribosome
ai	0006412	biological_process	translation
ai	0022625	cellular_component	cytosolic large ribosomal subunit
ai	0030687	cellular_component	preribosome, large subunit precursor
ai	1990904	cellular_component	ribonucleoprotein complex
aj	0002181	biological_process	cytoplasmic translation
aj	0003735	molecular_function	structural constituent of ribosome
aj	0005737	cellular_component	cytoplasm
aj	0005829	cellular_component	cytosol
aj	0005840	cellular_component	ribosome
aj	0006412	biological_process	translation
aj	0022625	cellular_component	cytosolic large ribosomal subunit
aj	0030687	cellular_component	preribosome, large subunit precursor
aj	0042254	biological_process	ribosome biogenesis
aj	1990904	cellular_component	ribonucleoprotein complex
ak	0002181	biological_process	cytoplasmic translation
ak	0003735	molecular_function	structural constituent of ribosome
ak	0005737	cellular_component	cytoplasm
ak	0005829	cellular_component	cytosol
ak	0005840	cellular_component	ribosome
ak	0006412	biological_process	translation
ak	0022625	cellular_component	cytosolic large ribosomal subunit
ak	0042273	biological_process	ribosomal large subunit biogenesis
ak	1990904	cellular_component	ribonucleoprotein complex
al	0002181	biological_process	cytoplasmic translation
al	0003735	molecular_function	structural constituent of ribosome
al	0005737	cellular_component	cytoplasm
al	0005829	cellular_component	cytosol
al	0005840	cellular_component	ribosome
al	0006412	biological_process	translation
al	0022625	cellular_component	cytosolic large ribosomal subunit
al	1990904	cellular_component	ribonucleoprotein complex
am	0002181	biological_process	cytoplasmic translation
am	0003735	molecular_function	structural constituent of ribosome
am	0005737	cellular_component	cytoplasm
am	0005829	cellular_component	cytosol
am	0005840	cellular_component	ribosome
am	0006412	biological_process	translation
am	0006450	biological_process	regulation of translational fidelity
am	0022625	cellular_component	cytosolic large ribosomal subunit
am	1990904	cellular_component	ribonucleoprotein complex
an	0002181	biological_process	cytoplasmic translation
an	0003723	molecular_function	RNA binding
an	0003735	molecular_function	structural constituent of ribosome
an	0005737	cellular_component	cytoplasm
an	0005829	cellular_component	cytosol
an	0005840	cellular_component	ribosome
an	0006364	biological_process	rRNA processing
an	0022625	cellular_component	cytosolic large ribosomal subunit
an	0030627	molecular_function	pre-mRNA 5'-splice site binding
an	0048025	biological_process	negative regulation of mRNA splicing, via spliceosome
an	1990904	cellular_component	ribonucleoprotein complex
ao	0002181	biological_process	cytoplasmic translation
ao	0003735	molecular_function	structural constituent of ribosome
ao	0005737	cellular_component	cytoplasm
ao	0005829	cellular_component	cytosol
ao	0005840	cellular_component	ribosome
ao	0006412	biological_process	translation
ao	0022625	cellular_component	cytosolic large ribosomal subunit
ao	1990904	cellular_component	ribonucleoprotein complex
ap	0002181	biological_process	cytoplasmic translation
ap	0003723	molecular_function	RNA binding
ap	0003735	molecular_function	structural constituent of ribosome
ap	0005634	cellular_component	nucleus
ap	0005737	cellular_component	cytoplasm
ap	0005829	cellular_component	cytosol
ap	0005840	cellular_component	ribosome
ap	0006412	biological_process	translation
ap	0015934	cellular_component	large ribosomal subunit
ap	0022625	cellular_component	cytosolic large ribosomal subunit
ap	0043232	cellular_component	intracellular non-membrane-bounded organelle
ap	1990904	cellular_component	ribonucleoprotein complex
aq	0002181	biological_process	cytoplasmic translation
aq	0003735	molecular_function	structural constituent of ribosome
aq	0005737	cellular_component	cytoplasm
aq	0005829	cellular_component	cytosol
aq	0005840	cellular_component	ribosome
aq	0006412	biological_process	translation
aq	0022625	cellular_component	cytosolic large ribosomal subunit
aq	1990904	cellular_component	ribonucleoprotein complex
ar	0002181	biological_process	cytoplasmic translation
ar	0003723	molecular_function	RNA binding
ar	0003735	molecular_function	structural constituent of ribosome
ar	0005737	cellular_component	cytoplasm
ar	0005829	cellular_component	cytosol
ar	0005840	cellular_component	ribosome
ar	0006412	biological_process	translation
ar	0015934	cellular_component	large ribosomal subunit
ar	0022625	cellular_component	cytosolic large ribosomal subunit
ar	0042273	biological_process	ribosomal large subunit biogenesis
ar	1990904	cellular_component	ribonucleoprotein complex
as	0000027	biological_process	ribosomal large subunit assembly
as	0002181	biological_process	cytoplasmic translation
as	0003723	molecular_function	RNA binding
as	0003735	molecular_function	structural constituent of ribosome
as	0005515	molecular_function	protein binding
as	0005737	cellular_component	cytoplasm
as	0005829	cellular_component	cytosol
as	0005840	cellular_component	ribosome
as	0006412	biological_process	translation
as	0019843	molecular_function	rRNA binding
as	0022625	cellular_component	cytosolic large ribosomal subunit
as	0030687	cellular_component	preribosome, large subunit precursor
as	1990904	cellular_component	ribonucleoprotein complex
at	0002181	biological_process	cytoplasmic translation
at	0003723	molecular_function	RNA binding
at	0003729	molecular_function	mRNA binding
at	0003735	molecular_function	structural constituent of ribosome
at	0005737	cellular_component	cytoplasm
at	0005829	cellular_component	cytosol
at	0005840	cellular_component	ribosome
at	0022625	cellular_component	cytosolic large ribosomal subunit
at	1990904	cellular_component	ribonucleoprotein complex
au	0002181	biological_process	cytoplasmic translation
au	0003723	molecular_function	RNA binding
au	0003735	molecular_function	structural constituent of ribosome
au	0005737	cellular_component	cytoplasm
au	0005829	cellular_component	cytosol
au	0005840	cellular_component	ribosome
au	0006412	biological_process	translation
au	0022625	cellular_component	cytosolic large ribosomal subunit
au	1990904	cellular_component	ribonucleoprotein complex
b	0000028	biological_process	ribosomal small subunit assembly
b	0000462	biological_process	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
b	0003723	molecular_function	RNA binding
b	0003735	molecular_function	structural constituent of ribosome
b	0005737	cellular_component	cytoplasm
b	0005829	cellular_component	cytosol
b	0005840	cellular_component	ribosome
b	0006412	biological_process	translation
b	0008270	molecular_function	zinc ion binding
b	0022627	cellular_component	cytosolic small ribosomal subunit
b	0044391	cellular_component	ribosomal subunit
b	0046872	molecular_function	metal ion binding
b	1990904	cellular_component	ribonucleoprotein complex
c	0000028	biological_process	ribosomal small subunit assembly
c	0000054	biological_process	ribosomal subunit export from nucleus
c	0002181	biological_process	cytoplasmic translation
c	0003735	molecular_function	structural constituent of ribosome
c	0005737	cellular_component	cytoplasm
c	0005829	cellular_component	cytosol
c	0005840	cellular_component	ribosome
c	0006412	biological_process	translation
c	0022627	cellular_component	cytosolic small ribosomal subunit
c	0030490	biological_process	maturation of SSU-rRNA
c	1900153	biological_process	positive regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay
c	1990904	cellular_component	ribonucleoprotein complex
d	0002181	biological_process	cytoplasmic translation
d	0003735	molecular_function	structural constituent of ribosome
d	0005737	cellular_component	cytoplasm
d	0005829	cellular_component	cytosol
d	0005840	cellular_component	ribosome
d	0006412	biological_process	translation
d	0008270	molecular_function	zinc ion binding
d	0022627	cellular_component	cytosolic small ribosomal subunit
d	0046872	molecular_function	metal ion binding
d	1990904	cellular_component	ribonucleoprotein complex
e	0002181	biological_process	cytoplasmic translation
e	0003735	molecular_function	structural constituent of ribosome
e	0005737	cellular_component	cytoplasm
e	0005829	cellular_component	cytosol
e	0005840	cellular_component	ribosome
e	0006412	biological_process	translation
e	0010494	cellular_component	cytoplasmic stress granule
e	0022627	cellular_component	cytosolic small ribosomal subunit
e	1990904	cellular_component	ribonucleoprotein complex
f	0000028	biological_process	ribosomal small subunit assembly
f	0002109	biological_process	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, LSU-rRNA,5S)
f	0002181	biological_process	cytoplasmic translation
f	0003735	molecular_function	structural constituent of ribosome
f	0005634	cellular_component	nucleus
f	0005737	cellular_component	cytoplasm
f	0005829	cellular_component	cytosol
f	0005840	cellular_component	ribosome
f	0006412	biological_process	translation
f	0008270	molecular_function	zinc ion binding
f	0016567	biological_process	protein ubiquitination
f	0019941	biological_process	modification-dependent protein catabolic process
f	0022627	cellular_component	cytosolic small ribosomal subunit
f	0031386	molecular_function	protein tag activity
f	0031625	molecular_function	ubiquitin protein ligase binding
f	0042254	biological_process	ribosome biogenesis
f	0044391	cellular_component	ribosomal subunit
f	0046872	molecular_function	metal ion binding
f	1990904	cellular_component	ribonucleoprotein complex
g	0001934	biological_process	positive regulation of protein phosphorylation
g	0001965	molecular_function	G-protein alpha-subunit binding
g	0002181	biological_process	cytoplasmic translation
g	0005080	molecular_function	protein kinase C binding
g	0005092	molecular_function	GDP-dissociation inhibitor activity
g	0005634	cellular_component	nucleus
g	0005737	cellular_component	cytoplasm
g	0005829	cellular_component	cytosol
g	0005840	cellular_component	ribosome
g	0007186	biological_process	G protein-coupled receptor signaling pathway
g	0010629	biological_process	negative regulation of gene expression
g	0017148	biological_process	negative regulation of translation
g	0022627	cellular_component	cytosolic small ribosomal subunit
g	0043022	molecular_function	ribosome binding
g	0045182	molecular_function	translation regulator activity
g	0061157	biological_process	mRNA destabilization
g	0072344	biological_process	rescue of stalled ribosome
g	1902660	biological_process	negative regulation of glucose mediated signaling pathway
g	1990116	biological_process	ribosome-associated ubiquitin-dependent protein catabolic process
g	1990904	cellular_component	ribonucleoprotein complex
g	2001125	biological_process	negative regulation of translational frameshifting
h	0002181	biological_process	cytoplasmic translation
h	0003723	molecular_function	RNA binding
h	0003735	molecular_function	structural constituent of ribosome
h	0005737	cellular_component	cytoplasm
h	0005829	cellular_component	cytosol
h	0005840	cellular_component	ribosome
h	0006412	biological_process	translation
h	0019843	molecular_function	rRNA binding
h	0022625	cellular_component	cytosolic large ribosomal subunit
h	0022626	cellular_component	cytosolic ribosome
h	1990904	cellular_component	ribonucleoprotein complex
i	0000027	biological_process	ribosomal large subunit assembly
i	0002181	biological_process	cytoplasmic translation
i	0003723	molecular_function	RNA binding
i	0003735	molecular_function	structural constituent of ribosome
i	0005515	molecular_function	protein binding
i	0005737	cellular_component	cytoplasm
i	0005829	cellular_component	cytosol
i	0005840	cellular_component	ribosome
i	0006364	biological_process	rRNA processing
i	0006412	biological_process	translation
i	0022625	cellular_component	cytosolic large ribosomal subunit
i	1990145	biological_process	maintenance of translational fidelity
i	1990904	cellular_component	ribonucleoprotein complex
j	0002181	biological_process	cytoplasmic translation
j	0003723	molecular_function	RNA binding
j	0003735	molecular_function	structural constituent of ribosome
j	0005634	cellular_component	nucleus
j	0005737	cellular_component	cytoplasm
j	0005829	cellular_component	cytosol
j	0005840	cellular_component	ribosome
j	0006412	biological_process	translation
j	0022625	cellular_component	cytosolic large ribosomal subunit
j	1990904	cellular_component	ribonucleoprotein complex
k	0000027	biological_process	ribosomal large subunit assembly
k	0002181	biological_process	cytoplasmic translation
k	0003723	molecular_function	RNA binding
k	0003735	molecular_function	structural constituent of ribosome
k	0005515	molecular_function	protein binding
k	0005634	cellular_component	nucleus
k	0005737	cellular_component	cytoplasm
k	0005829	cellular_component	cytosol
k	0005840	cellular_component	ribosome
k	0006412	biological_process	translation
k	0008097	molecular_function	5S rRNA binding
k	0019843	molecular_function	rRNA binding
k	0022625	cellular_component	cytosolic large ribosomal subunit
k	1990904	cellular_component	ribonucleoprotein complex
l	0000027	biological_process	ribosomal large subunit assembly
l	0002181	biological_process	cytoplasmic translation
l	0003723	molecular_function	RNA binding
l	0003735	molecular_function	structural constituent of ribosome
l	0005737	cellular_component	cytoplasm
l	0005829	cellular_component	cytosol
l	0005840	cellular_component	ribosome
l	0006412	biological_process	translation
l	0022625	cellular_component	cytosolic large ribosomal subunit
l	1990904	cellular_component	ribonucleoprotein complex
m	0000463	biological_process	maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
m	0000470	biological_process	maturation of LSU-rRNA
m	0002181	biological_process	cytoplasmic translation
m	0003723	molecular_function	RNA binding
m	0003735	molecular_function	structural constituent of ribosome
m	0005737	cellular_component	cytoplasm
m	0005829	cellular_component	cytosol
m	0005840	cellular_component	ribosome
m	0022625	cellular_component	cytosolic large ribosomal subunit
m	0042273	biological_process	ribosomal large subunit biogenesis
m	1990904	cellular_component	ribonucleoprotein complex
n	0000470	biological_process	maturation of LSU-rRNA
n	0002181	biological_process	cytoplasmic translation
n	0003723	molecular_function	RNA binding
n	0003735	molecular_function	structural constituent of ribosome
n	0005737	cellular_component	cytoplasm
n	0005829	cellular_component	cytosol
n	0005840	cellular_component	ribosome
n	0022625	cellular_component	cytosolic large ribosomal subunit
n	0042254	biological_process	ribosome biogenesis
n	0043232	cellular_component	intracellular non-membrane-bounded organelle
n	1990904	cellular_component	ribonucleoprotein complex
o	0002181	biological_process	cytoplasmic translation
o	0003735	molecular_function	structural constituent of ribosome
o	0005737	cellular_component	cytoplasm
o	0005829	cellular_component	cytosol
o	0005840	cellular_component	ribosome
o	0006412	biological_process	translation
o	0019843	molecular_function	rRNA binding
o	0022625	cellular_component	cytosolic large ribosomal subunit
o	1990904	cellular_component	ribonucleoprotein complex
p	0000027	biological_process	ribosomal large subunit assembly
p	0002181	biological_process	cytoplasmic translation
p	0003735	molecular_function	structural constituent of ribosome
p	0005737	cellular_component	cytoplasm
p	0005829	cellular_component	cytosol
p	0005840	cellular_component	ribosome
p	0006412	biological_process	translation
p	0006415	biological_process	translational termination
p	0022625	cellular_component	cytosolic large ribosomal subunit
p	1990904	cellular_component	ribonucleoprotein complex
q	0000027	biological_process	ribosomal large subunit assembly
q	0002181	biological_process	cytoplasmic translation
q	0003723	molecular_function	RNA binding
q	0003735	molecular_function	structural constituent of ribosome
q	0005634	cellular_component	nucleus
q	0005737	cellular_component	cytoplasm
q	0005829	cellular_component	cytosol
q	0005840	cellular_component	ribosome
q	0006412	biological_process	translation
q	0019843	molecular_function	rRNA binding
q	0022625	cellular_component	cytosolic large ribosomal subunit
q	1990904	cellular_component	ribonucleoprotein complex
r	0002181	biological_process	cytoplasmic translation
r	0003723	molecular_function	RNA binding
r	0003735	molecular_function	structural constituent of ribosome
r	0005737	cellular_component	cytoplasm
r	0005829	cellular_component	cytosol
r	0005840	cellular_component	ribosome
r	0006412	biological_process	translation
r	0022625	cellular_component	cytosolic large ribosomal subunit
r	1990904	cellular_component	ribonucleoprotein complex
s	0002181	biological_process	cytoplasmic translation
s	0003723	molecular_function	RNA binding
s	0003735	molecular_function	structural constituent of ribosome
s	0005737	cellular_component	cytoplasm
s	0005829	cellular_component	cytosol
s	0005840	cellular_component	ribosome
s	0006412	biological_process	translation
s	0016236	biological_process	macroautophagy
s	0022625	cellular_component	cytosolic large ribosomal subunit
s	0032991	cellular_component	protein-containing complex
s	0042273	biological_process	ribosomal large subunit biogenesis
s	0043229	cellular_component	intracellular organelle
s	1990904	cellular_component	ribonucleoprotein complex
t	0002181	biological_process	cytoplasmic translation
t	0003723	molecular_function	RNA binding
t	0003735	molecular_function	structural constituent of ribosome
t	0005737	cellular_component	cytoplasm
t	0005829	cellular_component	cytosol
t	0005840	cellular_component	ribosome
t	0006412	biological_process	translation
t	0022625	cellular_component	cytosolic large ribosomal subunit
t	0022626	cellular_component	cytosolic ribosome
t	1990904	cellular_component	ribonucleoprotein complex
u	0002181	biological_process	cytoplasmic translation
u	0003723	molecular_function	RNA binding
u	0003729	molecular_function	mRNA binding
u	0003735	molecular_function	structural constituent of ribosome
u	0005737	cellular_component	cytoplasm
u	0005829	cellular_component	cytosol
u	0005840	cellular_component	ribosome
u	0006412	biological_process	translation
u	0015934	cellular_component	large ribosomal subunit
u	0017148	biological_process	negative regulation of translation
u	0022625	cellular_component	cytosolic large ribosomal subunit
u	1990904	cellular_component	ribonucleoprotein complex
v	0000448	biological_process	cleavage in ITS2 between 5.8S rRNA and LSU-rRNA of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
v	0002181	biological_process	cytoplasmic translation
v	0003735	molecular_function	structural constituent of ribosome
v	0005737	cellular_component	cytoplasm
v	0005829	cellular_component	cytosol
v	0005840	cellular_component	ribosome
v	0006412	biological_process	translation
v	0015934	cellular_component	large ribosomal subunit
v	0022625	cellular_component	cytosolic large ribosomal subunit
v	0030687	cellular_component	preribosome, large subunit precursor
v	1990904	cellular_component	ribonucleoprotein complex
w	0002181	biological_process	cytoplasmic translation
w	0003723	molecular_function	RNA binding
w	0003735	molecular_function	structural constituent of ribosome
w	0005737	cellular_component	cytoplasm
w	0005829	cellular_component	cytosol
w	0005840	cellular_component	ribosome
w	0006412	biological_process	translation
w	0022625	cellular_component	cytosolic large ribosomal subunit
w	0043232	cellular_component	intracellular non-membrane-bounded organelle
w	1990904	cellular_component	ribonucleoprotein complex
x	0002181	biological_process	cytoplasmic translation
x	0003723	molecular_function	RNA binding
x	0003735	molecular_function	structural constituent of ribosome
x	0005737	cellular_component	cytoplasm
x	0005829	cellular_component	cytosol
x	0005840	cellular_component	ribosome
x	0006412	biological_process	translation
x	0022625	cellular_component	cytosolic large ribosomal subunit
x	1990904	cellular_component	ribonucleoprotein complex
y	0002181	biological_process	cytoplasmic translation
y	0003735	molecular_function	structural constituent of ribosome
y	0005737	cellular_component	cytoplasm
y	0005829	cellular_component	cytosol
y	0005840	cellular_component	ribosome
y	0006412	biological_process	translation
y	0022625	cellular_component	cytosolic large ribosomal subunit
y	1990904	cellular_component	ribonucleoprotein complex
z	0002181	biological_process	cytoplasmic translation
z	0003735	molecular_function	structural constituent of ribosome
z	0005737	cellular_component	cytoplasm
z	0005829	cellular_component	cytosol
z	0005840	cellular_component	ribosome
z	0006412	biological_process	translation
z	0022625	cellular_component	cytosolic large ribosomal subunit
z	1990904	cellular_component	ribonucleoprotein complex

Functional Information from PDB Data

site_id	AC1
Number of Residues	1
Details	binding site for residue MG 2 1901

Chain	Residue
2	U608

site_id	AC2
Number of Residues	1
Details	binding site for residue MG 2 1903

Chain	Residue
2	A746

site_id	AC3
Number of Residues	3
Details	binding site for residue MG 2 1906

Chain	Residue
2	A100
2	U101
2	C361

site_id	AC4
Number of Residues	1
Details	binding site for residue MG 2 1907

Chain	Residue
2	C424

site_id	AC5
Number of Residues	2
Details	binding site for residue MG 2 1908

Chain	Residue
2	C49
2	A425

site_id	AC6
Number of Residues	1
Details	binding site for residue MG 2 1909

Chain	Residue
2	A100

site_id	AC7
Number of Residues	1
Details	binding site for residue MG 2 1910

Chain	Residue
2	C402

site_id	AC8
Number of Residues	1
Details	binding site for residue MG 2 1911

Chain	Residue
2	A401

site_id	AC9
Number of Residues	3
Details	binding site for residue MG 2 1912

Chain	Residue
2	G1629
2	U1630
2	G1793

site_id	AD1
Number of Residues	2
Details	binding site for residue MG 2 1913

Chain	Residue
2	G942
a	GLY16

site_id	AD2
Number of Residues	1
Details	binding site for residue MG 2 1914

Chain	Residue
2	C573

site_id	AD3
Number of Residues	2
Details	binding site for residue MG 2 1915

Chain	Residue
2	C627
2	U968

site_id	AD4
Number of Residues	3
Details	binding site for residue MG 2 1916

Chain	Residue
2	A623
2	G624
2	C625

site_id	AD5
Number of Residues	1
Details	binding site for residue MG 2 1917

Chain	Residue
2	A1025

site_id	AD6
Number of Residues	1
Details	binding site for residue MG 2 1918

Chain	Residue
2	A623

site_id	AD7
Number of Residues	3
Details	binding site for residue MG 2 1919

Chain	Residue
2	A619
2	A620
2	A621

site_id	AD8
Number of Residues	1
Details	binding site for residue MG 2 1920

Chain	Residue
2	A619

site_id	AD9
Number of Residues	1
Details	binding site for residue MG 2 1921

Chain	Residue
2	A1142

site_id	AE1
Number of Residues	2
Details	binding site for residue MG 2 1922

Chain	Residue
2	G10
2	A1633

site_id	AE2
Number of Residues	1
Details	binding site for residue MG 2 1923

Chain	Residue
2	G1140

site_id	AE3
Number of Residues	2
Details	binding site for residue MG 2 1924

Chain	Residue
2	G1109
2	G1110

site_id	AE4
Number of Residues	2
Details	binding site for residue MG 2 1925

Chain	Residue
2	C17
2	G1108

site_id	AE5
Number of Residues	1
Details	binding site for residue MG 2 1926

Chain	Residue
2	G16

site_id	AE6
Number of Residues	3
Details	binding site for residue MG 2 1928

Chain	Residue
2	C1764
2	A1765
2	U1770

site_id	AE7
Number of Residues	4
Details	binding site for residue MG 2 1929

Chain	Residue
2	G1629
2	A1765
2	A1766
2	A1794

site_id	AE8
Number of Residues	1
Details	binding site for residue MG 2 1930

Chain	Residue
2	C1162

site_id	AE9
Number of Residues	2
Details	binding site for residue MG 2 1931

Chain	Residue
2	A1160
2	U1579

site_id	AF1
Number of Residues	3
Details	binding site for residue MG 2 1932

Chain	Residue
2	G895
2	A915
2	U917

site_id	AF2
Number of Residues	4
Details	binding site for residue MG 2 1933

Chain	Residue
2	U1353
2	G1354
2	G1368
2	U1369

site_id	AF3
Number of Residues	1
Details	binding site for residue MG 2 1934

Chain	Residue
2	G337

site_id	AF4
Number of Residues	2
Details	binding site for residue MG 2 1935

Chain	Residue
2	U327
2	G337

site_id	AF5
Number of Residues	2
Details	binding site for residue MG 2 1938

Chain	Residue
2	U928
2	A929

site_id	AF6
Number of Residues	4
Details	binding site for residue MG 2 1941

Chain	Residue
2	G936
2	C937
2	G1074
2	C1075

site_id	AF7
Number of Residues	4
Details	binding site for residue MG 2 1942

Chain	Residue
2	G1046
2	G1047
2	G1048
2	U1071

site_id	AF8
Number of Residues	4
Details	binding site for residue MG 2 1943

Chain	Residue
2	U1044
2	C1045
2	G1073
2	G1074

site_id	AF9
Number of Residues	1
Details	binding site for residue MG 2 1944

Chain	Residue
2	G548

site_id	AG1
Number of Residues	1
Details	binding site for residue MG 2 1945

Chain	Residue
2	C583

site_id	AG2
Number of Residues	3
Details	binding site for residue MG 2 1946

Chain	Residue
2	A550
2	G551
2	U582

site_id	AG3
Number of Residues	2
Details	binding site for residue MG 2 1948

Chain	Residue
2	G552
2	A555

site_id	AG4
Number of Residues	3
Details	binding site for residue MG 2 1950

Chain	Residue
2	G371
2	A605
2	G607

site_id	AG5
Number of Residues	2
Details	binding site for residue MG 2 1952

Chain	Residue
2	U633
2	G634

site_id	AG6
Number of Residues	1
Details	binding site for residue MG 2 1953

Chain	Residue
2	G1035

site_id	AG7
Number of Residues	1
Details	binding site for residue MG 2 1954

Chain	Residue
2	A863

site_id	AG8
Number of Residues	1
Details	binding site for residue MG 2 1955

Chain	Residue
2	G95

site_id	AG9
Number of Residues	1
Details	binding site for residue MG 2 1956

Chain	Residue
2	C427

site_id	AH1
Number of Residues	2
Details	binding site for residue MG 2 1957

Chain	Residue
2	G1448
2	U1449

site_id	AH2
Number of Residues	1
Details	binding site for residue MG 2 1958

Chain	Residue
2	C1205

site_id	AH3
Number of Residues	3
Details	binding site for residue MG 2 1959

Chain	Residue
2	A1202
2	A1203
2	C1599

site_id	AH4
Number of Residues	1
Details	binding site for residue MG 2 1960

Chain	Residue
2	G1201

site_id	AH5
Number of Residues	4
Details	binding site for residue MG 2 1961

Chain	Residue
2	A1204
2	C1205
2	U1206
2	G1455

site_id	AH6
Number of Residues	2
Details	binding site for residue MG 2 1962

Chain	Residue
2	C1457
2	G1176

site_id	AH7
Number of Residues	2
Details	binding site for residue MG 2 1963

Chain	Residue
2	G1484
2	U1522

site_id	AH8
Number of Residues	1
Details	binding site for residue MG 2 1964

Chain	Residue
2	U1168

site_id	AH9
Number of Residues	3
Details	binding site for residue MG 2 1966

Chain	Residue
2	A1196
2	C1197
U	LYS77

site_id	AI1
Number of Residues	1
Details	binding site for residue MG 2 1967

Chain	Residue
2	U1595

site_id	AI2
Number of Residues	3
Details	binding site for residue MG 2 1969

Chain	Residue
2	G1540
2	G1541
2	G1542

site_id	AI3
Number of Residues	1
Details	binding site for residue MG 2 1970

Chain	Residue
2	C1589

site_id	AI4
Number of Residues	1
Details	binding site for residue MG 2 1973

Chain	Residue
2	G1297

site_id	AI5
Number of Residues	3
Details	binding site for residue MG 2 1974

Chain	Residue
2	U1293
2	G1294
2	U1303

site_id	AI6
Number of Residues	2
Details	binding site for residue MG 2 1975

Chain	Residue
2	C1158
2	G1616

site_id	AI7
Number of Residues	2
Details	binding site for residue MG 2 1976

Chain	Residue
2	C1159
2	U1283

site_id	AI8
Number of Residues	5
Details	binding site for residue MG 2 1977

Chain	Residue
2	G1273
2	G1278
2	C1279
2	G1429
2	U1430

site_id	AI9
Number of Residues	2
Details	binding site for residue MG 2 1978

Chain	Residue
2	C1274
2	G1428

site_id	AJ1
Number of Residues	4
Details	binding site for residue MG 2 1979

Chain	Residue
2	G1273
2	G1277
2	U1434
2	A1436

site_id	AJ2
Number of Residues	1
Details	binding site for residue MG 2 1981

Chain	Residue
2	MG1982

site_id	AJ3
Number of Residues	3
Details	binding site for residue MG 2 1982

Chain	Residue
2	G1760
2	U1761
2	MG1981

site_id	AJ4
Number of Residues	3
Details	binding site for residue MG E 301

Chain	Residue
2	C449
E	ARG30
E	THR81

site_id	AJ5
Number of Residues	4
Details	binding site for residue MG F 301

Chain	Residue
2	C1472
F	ALA183
F	ASN186
F	LYS188

site_id	AJ6
Number of Residues	5
Details	binding site for residue ZN d 101

Chain	Residue
d	CYS21
d	VAL23
d	CYS24
d	CYS39
d	CYS42

site_id	AJ7
Number of Residues	4
Details	binding site for residue ZN f 201

Chain	Residue
f	ASN123
f	THR125
f	CYS126
f	CYS144

site_id	AJ8
Number of Residues	4
Details	binding site for residue ZN aj 201

Chain	Residue
aj	CYS44
aj	CYS47
aj	CYS81
aj	CYS84

site_id	AJ9
Number of Residues	4
Details	binding site for residue ZN ag 101

Chain	Residue
ag	CYS19
ag	CYS22
ag	CYS34
ag	CYS37

site_id	AK1
Number of Residues	4
Details	binding site for residue ZN ad 201

Chain	Residue
ad	CYS96
ad	CYS99
ad	CYS110
ad	CYS115

site_id	AK2
Number of Residues	4
Details	binding site for residue ZN ab 201

Chain	Residue
ab	CYS12
ab	CYS17
ab	CYS74
ab	CYS77

site_id	AK3
Number of Residues	5
Details	binding site for residue ZN aa 501

Chain	Residue
aa	CYS39
aa	CYS42
aa	CYS57
aa	CYS59
aa	CYS60

site_id	AK4
Number of Residues	2
Details	binding site for residue MG 1 3401

Chain	Residue
1	A846
2	A630

site_id	AK5
Number of Residues	1
Details	binding site for residue MG 6 101

Chain	Residue
6	U29

Functional Information from PROSITE/UniProt

site_id	PS00430
Number of Residues	67
Details	TONB_DEPENDENT_REC_1 TonB-dependent receptor (TBDR) proteins signature 1. taqqapkwypsedvaapkktrkavrpqklraslvpgtvlillagrfrgkrvvylkhled........................................................NTLLVTGP

Chain	Residue	Details
l	THR2-PRO68

site_id	PS00051
Number of Residues	17
Details	RIBOSOMAL_L39E Ribosomal protein L39e signature. RTnntIryNakrRNWRR

Chain	Residue	Details
ae	ARG30-ARG46

site_id	PS00299
Number of Residues	26
Details	UBIQUITIN_1 Ubiquitin domain signature. KskIqDkegIPpdqQrLIFaGkqleD

Chain	Residue	Details
f	LYS27-ASP52
ad	LYS27-ASP52

site_id	PS00474
Number of Residues	24
Details	RIBOSOMAL_L3 Ribosomal protein L3 signature. FeqnemiDaiAvTkGHGfeGvthR

Chain	Residue	Details
i	PHE209-ARG232

site_id	PS00050
Number of Residues	16
Details	RIBOSOMAL_L23 Ribosomal protein L23 signature. KKAYVRLTadydaldI

Chain	Residue	Details
as	LYS120-ILE135

site_id	PS00056
Number of Residues	13
Details	RIBOSOMAL_S17 Ribosomal protein S17 signature. GDiVtVgQcRPIS

Chain	Residue	Details
L	GLY120-SER132

site_id	PS00053
Number of Residues	18
Details	RIBOSOMAL_S8 Ribosomal protein S8 signature. GyvILTTSaGIMdheeAR

Chain	Residue	Details
W	GLY100-ARG117

site_id	PS01189
Number of Residues	19
Details	RIBOSOMAL_S12E Ribosomal protein S12e signature. ALKvvLrtAlvhDGLarGL

Chain	Residue	Details
M	ALA27-LEU45

site_id	PS00054
Number of Residues	23
Details	RIBOSOMAL_S11 Ribosomal protein S11 signature. LrALarS.GLrIgrieDvTPvPSD

Chain	Residue	Details
O	LEU102-ASP124

site_id	PS00361
Number of Residues	16
Details	RIBOSOMAL_S10 Ribosomal protein S10 signature. AeqhNLvkkGPVrLPT

Chain	Residue	Details
U	ALA45-THR60

site_id	PS01106
Number of Residues	18
Details	RIBOSOMAL_L18E Ribosomal protein L18e signature. KaLflSKinRPpVSVsRI

Chain	Residue	Details
w	LYS50-ILE67

site_id	PS01194
Number of Residues	24
Details	RIBOSOMAL_L15E Ribosomal protein L15e signature. DKARrLGYkAkqGFVIYRvRVrRG

Chain	Residue	Details
t	ASP46-GLY69

site_id	PS00700
Number of Residues	22
Details	RIBOSOMAL_L6_2 Ribosomal protein L6 signature 2. QicrVrnKdiRkFlDGIYVshK

Chain	Residue	Details
o	GLN163-LYS184

site_id	PS01104
Number of Residues	15
Details	RIBOSOMAL_L13E Ribosomal protein L13e signature. RaGRGFTLaEVkaaG

Chain	Residue	Details
r	ARG70-GLY84

site_id	PS01082
Number of Residues	18
Details	RIBOSOMAL_L7AE Ribosomal protein L7Ae signature. CkkmgVPYaiVkGKarLG

Chain	Residue	Details
n	CYS170-GLY187

site_id	PS01170
Number of Residues	19
Details	RIBOSOMAL_L6E Ribosomal protein L6e signature. NgvPLRRvnarYVIATSt.K

Chain	Residue	Details
l	ASN72-LYS90

site_id	PS00526
Number of Residues	20
Details	RIBOSOMAL_L19E Ribosomal protein L19e signature. QKRLaAsvvgVGkrkVWLDP

Chain	Residue	Details
x	GLN7-PRO26

site_id	PS00634
Number of Residues	33
Details	RIBOSOMAL_L30 Ribosomal protein L30 signature. VLqlLrLtRinSgTfvkvtkatleLLklIepYV

Chain	Residue	Details
m	VAL102-VAL134

site_id	PS00049
Number of Residues	27
Details	RIBOSOMAL_L14 Ribosomal protein L14 signature. AIVVrqakswrrr.DGvflyFedNagVI

Chain	Residue	Details
AB	ALA76-ILE102

site_id	PS01145
Number of Residues	14
Details	RIBOSOMAL_L34E Ribosomal protein L34e signature. TrSnKikvvKTPGG

Chain	Residue	Details
aj	THR15-GLY28

site_id	PS00362
Number of Residues	31
Details	RIBOSOMAL_S15 Ribosomal protein S15 signature. VrkHLernRkDkdAkfrLilIesrihrLarY

Chain	Residue	Details
N	VAL98-TYR128

site_id	PS00783
Number of Residues	24
Details	RIBOSOMAL_L13 Ribosomal protein L13 signature. LRGMVShktarGKaalerLkVFeG

Chain	Residue	Details
u	LEU84-GLY107

site_id	PS01077
Number of Residues	20
Details	RIBOSOMAL_L37E Ribosomal protein L37e signature. GTpSfGkRhnks.HtlCnRCG

Chain	Residue	Details
ag	GLY4-GLY23

site_id	PS01190
Number of Residues	11
Details	RIBOSOMAL_L36E Ribosomal protein L36e signature. PYERRlIDLIR

Chain	Residue	Details
ah	PRO52-ARG62

site_id	PS00529
Number of Residues	23
Details	RIBOSOMAL_S24E Ribosomal protein S24e signature. FGggKSvGFGlVYNSvaeakkfE

Chain	Residue	Details
Y	PHE64-GLU86

site_id	PS01257
Number of Residues	22
Details	RIBOSOMAL_L10E Ribosomal protein L10e signature. ADRlqqGMRgAWGKPhGlaARV

Chain	Residue	Details
p	ALA108-VAL129

site_id	PS00678
Number of Residues	15
Details	WD_REPEATS_1 Trp-Asp (WD) repeats signature. ALSAswDkTLRLWDV

Chain	Residue	Details
g	ALA80-VAL94
g	ILE169-LEU183
g	ILE211-LEU225

site_id	PS00712
Number of Residues	16
Details	RIBOSOMAL_S17E Ribosomal protein S17e signature. IqSKrLRNkIAGYtTH

Chain	Residue	Details
R	ILE41-HIS56

site_id	PS00464
Number of Residues	25
Details	RIBOSOMAL_L22 Ribosomal protein L22 signature. RrrTyRAhGRinkyesspSHIELvV

Chain	Residue	Details
v	ARG126-VAL150

site_id	PS01168
Number of Residues	33
Details	RIBOSOMAL_S27E Ribosomal protein S27e signature. KCpgClnittvFShAqtavtCesCStiLctPtG

Chain	Residue	Details
b	LYS36-GLY68

site_id	PS00360
Number of Residues	19
Details	RIBOSOMAL_S9 Ribosomal protein S9 signature. GGGhvSQvyAirqAiAKGL

Chain	Residue	Details
Q	GLY71-LEU89

site_id	PS00055
Number of Residues	8
Details	RIBOSOMAL_S12 Ribosomal protein S12 signature. KqPNSAiR

Chain	Residue	Details
X	LYS62-ARG69

site_id	PS00527
Number of Residues	23
Details	RIBOSOMAL_S14 Ribosomal protein S14 signature. RvCsshtglirkyg.LNICRqCFR

Chain	Residue	Details
d	ARG22-ARG44

site_id	PS00961
Number of Residues	9
Details	RIBOSOMAL_S28E Ribosomal protein S28e signature. ESEREARrL

Chain	Residue	Details
c	GLU58-LEU66

site_id	PS00709
Number of Residues	25
Details	RIBOSOMAL_L30E_1 Ribosomal protein L30e signature 1. SgkytlGyKstVKslRqGksKlIII

Chain	Residue	Details
an	SER20-ILE44

site_id	PS00993
Number of Residues	21
Details	RIBOSOMAL_L30E_2 Ribosomal protein L30e signature 2. ELGTavGKlfrvgvVsIlEaG

Chain	Residue	Details
an	GLU76-GLY96

site_id	PS00579
Number of Residues	15
Details	RIBOSOMAL_L29 Ribosomal protein L29 signature. SLPKIKtVRKSIACV

Chain	Residue	Details
ai	SER40-VAL54

site_id	PS00578
Number of Residues	12
Details	RIBOSOMAL_S6E Ribosomal protein S6e signature. ISGGnDkqGfPM

Chain	Residue	Details
G	ILE52-MET63

site_id	PS00632
Number of Residues	25
Details	RIBOSOMAL_S4 Ribosomal protein S4 signature. LErRLqtqVYKlglAkSvhhARvLI

Chain	Residue	Details
J	LEU105-ILE129

site_id	PS00733
Number of Residues	8
Details	RIBOSOMAL_S26E Ribosomal protein S26e signature. YCVSCAIH

Chain	Residue	Details
a	TYR73-HIS80

site_id	PS00475
Number of Residues	32
Details	RIBOSOMAL_L15 Ribosomal protein L15 signature. KILGkGrIpnvp.ViVkarfVSklAeekIraaG

Chain	Residue	Details
ap	LYS111-GLY142

site_id	PS01073
Number of Residues	18
Details	RIBOSOMAL_L24E Ribosomal protein L24e signature. FsGakIyPGrGtlFvRgD

Chain	Residue	Details
at	PHE8-ASP25

site_id	PS00548
Number of Residues	37
Details	RIBOSOMAL_S3 Ribosomal protein S3 signature. AKamkfadGfLihSgqpVndfIDtatrhvlMrqGvlG

Chain	Residue	Details
D	ALA147-GLY183

site_id	PS00962
Number of Residues	12
Details	RIBOSOMAL_S2_1 Ribosomal protein S2 signature 1. AqLLLAANTHLG

Chain	Residue	Details
A	ALA14-GLY25

site_id	PS00963
Number of Residues	25
Details	RIBOSOMAL_S2_2 Ribosomal protein S2 signature 2. PrlVIVtDprsDaqaIkEasyvNIP

Chain	Residue	Details
A	PRO118-PRO142

site_id	PS00585
Number of Residues	33
Details	RIBOSOMAL_S5 Ribosomal protein S5 signature. GQrtrFkAvvVVGDsn.GhVGlGiktak.EVag.AI

Chain	Residue	Details
C	GLY93-ILE125

site_id	PS00996
Number of Residues	9
Details	RIBOSOMAL_S21E Ribosomal protein S21e signature. LYVPRKCSA

Chain	Residue	Details
V	LEU11-ALA19

site_id	PS00528
Number of Residues	15
Details	RIBOSOMAL_S4E Ribosomal protein S4e signature. HlKRLAaPhhWlLdK

Chain	Residue	Details
E	HIS8-LYS22

site_id	PS00580
Number of Residues	21
Details	RIBOSOMAL_L32E Ribosomal protein L32e signature. FkRhhsdRyhRVaen..WRKqkG

Chain	Residue	Details
al	PHE17-GLY37

site_id	PS01107
Number of Residues	12
Details	RIBOSOMAL_L27E Ribosomal protein L27e signature. GKNqWFFskLRF

Chain	Residue	Details
aq	GLY125-PHE136

site_id	PS00323
Number of Residues	25
Details	RIBOSOMAL_S19 Ribosomal protein S19 signature. NGKafnqveIrpemLGhyLGEFsiT

Chain	Residue	Details
P	ASN98-THR122

site_id	PS01193
Number of Residues	20
Details	RIBOSOMAL_S8E Ribosomal protein S8e signature. RsaTGAkraqf.RkKrKfELG

Chain	Residue	Details
I	ARG11-GLY30

site_id	PS00467
Number of Residues	12
Details	RIBOSOMAL_L2 Ribosomal protein L2 signature. PktRGVAmNPvD

Chain	Residue	Details
h	PRO197-ASP208

site_id	PS01172
Number of Residues	12
Details	RIBOSOMAL_L44E Ribosomal protein L44e signature. KtTKKvvLRleC

Chain	Residue	Details
ab	LYS63-CYS74

site_id	PS01105
Number of Residues	22
Details	RIBOSOMAL_L35AE Ribosomal protein L35Ae signature. GKVtRtHGnsGvVrAtFrnnLP

Chain	Residue	Details
ak	GLY69-PRO90

site_id	PS01108
Number of Residues	18
Details	RIBOSOMAL_L24 Ribosomal protein L24 signature. DDeVlVVrGskKGqe.GkI

Chain	Residue	Details
ar	ASP53-ILE70

site_id	PS00948
Number of Residues	14
Details	RIBOSOMAL_S7E Ribosomal protein S7e signature. KLtRELEKKFQdRH

Chain	Residue	Details
H	LYS76-HIS89

site_id	PS01144
Number of Residues	15
Details	RIBOSOMAL_L31E Ribosomal protein L31e signature. VRLApeLNqAiWkRG

Chain	Residue	Details
am	VAL49-GLY63

site_id	PS00358
Number of Residues	17
Details	RIBOSOMAL_L5 Ribosomal protein L5 signature. LeqLSGQtpVqSkARyT

Chain	Residue	Details
q	LEU37-THR53

site_id	PS00628
Number of Residues	20
Details	RIBOSOMAL_S19E Ribosomal protein S19e signature. PykhidaSgsInRkVLQaLE

Chain	Residue	Details
T	PRO90-GLU109

site_id	PS00052
Number of Residues	27
Details	RIBOSOMAL_S7 Ribosomal protein S7 signature. ErLtnsLMmngrnnGKKlkavrIIkhT

Chain	Residue	Details
F	GLU91-THR117

site_id	PS01191
Number of Residues	13
Details	RIBOSOMAL_S3AE Ribosomal protein S3Ae signature. LkGRVvEvCLaDL

Chain	Residue	Details
B	LEU61-LEU73

site_id	PS00646
Number of Residues	14
Details	RIBOSOMAL_S13_1 Ribosomal protein S13 signature. RGiRHfwGlrVRGQ

Chain	Residue	Details
S	ARG123-GLN136

site_id	PS01171
Number of Residues	26
Details	RIBOSOMAL_L21E Ribosomal protein L21e signature. GDiVdikangsiqk.GmpHkfYqGkTG

Chain	Residue	Details
z	GLY37-GLY62

site_id	PS00939
Number of Residues	27
Details	RIBOSOMAL_L1E Ribosomal protein L1e signature. NhneKryATaSAIaATAvaslvlaRGH

Chain	Residue	Details
j	ASN114-HIS140

Functional Information from SwissProt/UniProt

site_id	SWS_FT_FI1
Number of Residues	21
Details	ZN_FING: C4-type

Chain	Residue	Details
aa	CYS39-CYS60
ai	SER50
an	LYS53
an	LYS83

site_id	SWS_FT_FI2
Number of Residues	1
Details	MOD_RES: Phosphoserine => ECO:0007744\|PubMed:17287358

Chain	Residue	Details
aa	SER40
L	LYS141
L	LYS148
ad	LYS93
ag	CYS34
ag	CYS37
x	LYS146
x	LYS186
L	LYS96
L	LYS105
L	LYS133

site_id	SWS_FT_FI3
Number of Residues	3
Details	CROSSLNK: Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0007744\|PubMed:22106047

Chain	Residue	Details
p	LYS40
f	LYS113
U	LYS21
p	LYS101
h	LYS119
h	LYS145
f	LYS33
f	LYS48
f	LYS63
f	LYS107

site_id	SWS_FT_FI4
Number of Residues	1
Details	MOD_RES: Phosphoserine => ECO:0007744\|PubMed:19779198

Chain	Residue	Details
i	SER297
I	SER154
g	LYS53
g	LYS107
g	LYS137
g	LYS161
E	LYS179
E	LYS211
E	LYS233

site_id	SWS_FT_FI5
Number of Residues	3
Details	CROSSLNK: Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0007744\|PubMed:22106047

Chain	Residue	Details
i	LYS39
i	LYS136
Q	LYS59

site_id	SWS_FT_FI6
Number of Residues	1
Details	MOD_RES: Phosphoserine => ECO:0007744\|PubMed:18407956

Chain	Residue	Details
I	SER158

site_id	SWS_FT_FI7
Number of Residues	1
Details	MOD_RES: Phosphothreonine => ECO:0007744\|PubMed:19779198

Chain	Residue	Details
D	THR231

site_id	SWS_FT_FI8
Number of Residues	5
Details	CROSSLNK: Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0007744\|PubMed:22106047

Chain	Residue	Details
D	LYS106
D	LYS132
D	LYS141
D	LYS151
D	LYS200

site_id	SWS_FT_FI9
Number of Residues	2
Details	CROSSLNK: Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000269\|PubMed:28757607, ECO:0000269\|PubMed:30718516, ECO:0000269\|PubMed:30893611, ECO:0000269\|PubMed:31819057, ECO:0007744\|PubMed:22106047

Chain	Residue	Details
D	LYS212

		Sequence (fasta)
		PDBx/mmCIF
		PDBML format (no-atom)
		Validation report (PDF)