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3W6R
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Crystal structure of the GAP domain of human MgcRacGAP
分子名称: Rac GTPase-activating protein 1
著者Matsuura, A, Lee, H.H.
登録日2013-02-21
公開日2014-02-26
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal structure of GTPase-activating domain from human MgcRacGAP.
Biochem.Biophys.Res.Commun., 435, 2013
3WPS
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crystal structure of the GAP domain of MgcRacGAP(S387D)
分子名称: Rac GTPase-activating protein 1, SULFATE ION
著者Murayama, K, Kato-murayama, M, Shirouzu, M, Kitamura, T, Yokoyama, S.
登録日2014-01-15
公開日2015-01-21
最終更新日2023-12-06
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献crystal structure of the GAP domain of MgcRacGAP
To be Published
8U4U
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Crystal structure of 53BP1 tandem Tudor domain homodimer engineered with two disulfide bridges
分子名称: TP53-binding protein 1
著者Cui, G, Botuyan, M.V, Thompson, J.R, Mer, G.
登録日2023-09-11
公開日2023-09-20
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (3.79 Å)
主引用文献An autoinhibited state of 53BP1 revealed by small molecule antagonists and protein engineering.
Nat Commun, 14, 2023
3WPQ
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crystal structure of the GAP domain of MgcRacGAP(S387A)
分子名称: Rac GTPase-activating protein 1
著者Murayama, K, Kato-Murayama, M, Shirouzu, M, Kitamura, T, Yokoyama, S.
登録日2014-01-15
公開日2015-01-21
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.84 Å)
主引用文献crystal structure of the GAP domain of MgcRacGAP
To be Published
8UX1
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Cryo-EM structure of Ran bound to RCC1 and the nucleosome core particle
分子名称: 153-bp Widom 601 DNA forward strand, 153-bp Widom 601 DNA reverse strand, GTP-binding nuclear protein Ran, ...
著者Huang, S.K, Rubinstein, J.L, Kay, L.E.
登録日2023-11-08
公開日2023-11-22
実験手法ELECTRON MICROSCOPY (2.5 Å)
主引用文献Cryo-EM structure of Ran bound to RCC1 and the nucleosome core particle
To Be Published
6B9M
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Crystal structure of UHRF1 TTD domain in complex with the polybasic region
分子名称: E3 ubiquitin-protein ligase UHRF1
著者Song, J, Tan, X.
登録日2017-10-10
公開日2018-02-14
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.68 Å)
主引用文献An Intramolecular Interaction of UHRF1 Reveals Dual Control for Its Histone Association.
Structure, 26, 2018
6B1G
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Solution structure of TDP-43 N-terminal domain dimer.
分子名称: TAR DNA-binding protein 43, S48E Mutant, Y4R Mutant
著者Naik, M.T, Wang, A, Conicella, A, Fawzi, N.L.
登録日2017-09-18
公開日2018-02-28
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献A single N-terminal phosphomimic disrupts TDP-43 polymerization, phase separation, and RNA splicing.
EMBO J., 37, 2018
8UJY
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Crystal structure of human WD repeat-containing protein 5 in complex with 4-(3,5-dimethoxybenzyl)-9-(4-fluoro-2-methylphenyl)-7-((2-imino-3-methyl-2,3-dihydro-1H-imidazol-1-yl)methyl)-3,4-dihydrobenzo[f][1,4]oxazepin-5(2H)-one (compound 8)
分子名称: (9P)-4-[(3,5-dimethoxyphenyl)methyl]-9-(4-fluoro-2-methylphenyl)-7-{[(2E)-2-imino-3-methyl-2,3-dihydro-1H-imidazol-1-yl]methyl}-3,4-dihydro-1,4-benzoxazepin-5(2H)-one, WD repeat-containing protein 5
著者Zhao, B, Amporndanai, K, Fesik, S.W.
登録日2023-10-11
公開日2023-12-20
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.01 Å)
主引用文献Structure-Based Discovery of Potent, Orally Bioavailable Benzoxazepinone-Based WD Repeat Domain 5 Inhibitors.
J.Med.Chem., 66, 2023
6BB3
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Lactate Dehydrogenase in complex with inhibitor 3-((2-chlorophenyl)thio)-6-(6-((4-fluorophenyl)amino)pyridin-2-yl)-4-hydroxy-6-(thiophen-3-yl)-5,6-dihydro-2H-pyran-2-one
分子名称: (6R)-3-[(2-chlorophenyl)sulfanyl]-6-{6-[(4-fluorophenyl)amino]pyridin-2-yl}-4-hydroxy-6-(thiophen-3-yl)-5,6-dihydro-2H-pyran-2-one, L-lactate dehydrogenase A chain, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, ...
著者Chen, Z, Eigenbrot, C.
登録日2017-10-16
公開日2018-10-24
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structure-guided optimization and in vivo activities of hydroxylactone and hydroxylactam Inhibitors of Human Lactate Dehydrogenase
To Be Published
6BCR
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Complex of 14-3-3 theta with an IRSp53 peptide phosphorylated at T340
分子名称: 1,2-ETHANEDIOL, 14-3-3 protein theta, DI(HYDROXYETHYL)ETHER, ...
著者Kast, D.J, Dominguez, R.
登録日2017-10-20
公開日2018-10-24
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.986 Å)
主引用文献Mechanism of IRSp53 inhibition by 14-3-3.
Nat Commun, 10, 2019
6B0T
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Structural Insights into the Induced-fit Inhibition of Fascin by a Small Molecule
分子名称: 4-methyl-N-(1-{[4-(trifluoromethyl)phenyl]methyl}-1H-indazol-3-yl)-1,2-oxazole-5-carboxamide, Fascin
著者Dey, R, Huang, X.Y.
登録日2017-09-15
公開日2018-04-18
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structural Insights into the Induced-fit Inhibition of Fascin by a Small-Molecule Inhibitor.
J. Mol. Biol., 430, 2018
8V4Y
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Cryo-EM structure of singly-bound SNF2h-nucleosome complex with SNF2h at inactive SHL2 (conformation 1)
分子名称: ADENOSINE-5'-DIPHOSPHATE, BERYLLIUM TRIFLUORIDE ION, Histone H2A type 1, ...
著者Chio, U.S, Palovcak, E, Armache, J.P, Narlikar, G.J, Cheng, Y.
登録日2023-11-29
公開日2024-03-20
実験手法ELECTRON MICROSCOPY (2.8 Å)
主引用文献Functionalized graphene-oxide grids enable high-resolution cryo-EM structures of the SNF2h-nucleosome complex without crosslinking.
Nat Commun, 15, 2024
8V6V
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Cryo-EM structure of doubly-bound SNF2h-nucleosome complex
分子名称: ADENOSINE-5'-DIPHOSPHATE, Histone H2A type 1, Histone H2B, ...
著者Chio, U.S, Palovcak, E, Armache, J.P, Narlikar, G.J, Cheng, Y.
登録日2023-12-03
公開日2024-03-20
実験手法ELECTRON MICROSCOPY (2.8 Å)
主引用文献Functionalized graphene-oxide grids enable high-resolution cryo-EM structures of the SNF2h-nucleosome complex without crosslinking.
Nat Commun, 15, 2024
6BB1
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Lactate Dehydrogenase in complex with inhibitor (R)-5-((2-chlorophenyl)thio)-6'-(4-fluorophenoxy)-4-hydroxy-2-(thiophen-3-yl)-2,3-dihydro-[2,2'-bipyridin]-6(1H)-one
分子名称: (2R)-5-[(2-chlorophenyl)sulfanyl]-6'-(4-fluorophenoxy)-4-hydroxy-2-(thiophen-3-yl)-2,3-dihydro[2,2'-bipyridin]-6(1H)-one, L-lactate dehydrogenase A chain, LACTIC ACID, ...
著者Ultsch, M, Eigenbrot, C.
登録日2017-10-16
公開日2018-10-24
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structure-guided optimization and in vivo activities of hydroxylactone and hydroxylactam Inhibitors of Human Lactate Dehydrogenase
To Be Published
6BB2
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Lactate Dehydrogenase in complex with inhibitor (S)-5-((2-chlorophenyl)thio)-6'-(4-fluorophenoxy)-4-hydroxy-2-(thiophen-3-yl)-2,3-dihydro-[2,2'-bipyridin]-6(1H)-one
分子名称: (2S)-5-[(2-chlorophenyl)sulfanyl]-6'-(4-fluorophenoxy)-4-hydroxy-2-(thiophen-3-yl)-2,3-dihydro[2,2'-bipyridin]-6(1H)-one, L-lactate dehydrogenase A chain, LACTIC ACID, ...
著者Ultsch, M, Eigenbrot, C.
登録日2017-10-16
公開日2018-10-24
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.47 Å)
主引用文献Structure-guided optimization and in vivo activities of hydroxylactone and hydroxylactam Inhibitors of Human Lactate Dehydrogenase
To Be Published
3ZKE
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Structure of LC8 in complex with Nek9 peptide
分子名称: DYNEIN LIGHT CHAIN 1, CYTOPLASMIC, NEK9 PROTEIN
著者Gallego, P, Velazquez-Campoy, A, Regue, L, Roig, J, Reverter, D.
登録日2013-01-22
公開日2013-03-20
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structural Analysis of the Regulation of the Dynll/Lc8 Binding to Nek9 by Phosphorylation
J.Biol.Chem., 288, 2013
3ZYL
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Structure of a truncated CALM (PICALM) ANTH domain
分子名称: PHOSPHATIDYLINOSITOL-BINDING CLATHRIN ASSEMBLY PROTEIN
著者Miller, S.E, Sahlender, D.A, Graham, S.C, Honing, S, Robinson, M.S, Peden, A.A, Owen, D.J.
登録日2011-08-23
公開日2011-12-07
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献The molecular basis for the endocytosis of small R-SNAREs by the clathrin adaptor CALM.
Cell, 147, 2011
3UCC
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Asymmetric complex of human neuron specific enolase-1-PGA/PEP
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 2-PHOSPHOGLYCERIC ACID, Gamma-enolase, ...
著者Qin, J, Chai, G, Brewer, J, Lovelace, L, Lebioda, L.
登録日2011-10-26
公開日2012-08-22
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Structures of asymmetric complexes of human neuron specific enolase with resolved substrate and product and an analogous complex with two inhibitors indicate subunit interaction and inhibitor cooperativity.
J.Inorg.Biochem., 111, 2012
3UJF
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Asymmetric complex of human neuron specific enolase-4-PGA/PEP
分子名称: 2-PHOSPHOGLYCERIC ACID, Gamma-enolase, MAGNESIUM ION, ...
著者Qin, J, Chai, G, Brewer, J, Lovelace, L, Lebioda, L.
登録日2011-11-07
公開日2012-08-22
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structures of asymmetric complexes of human neuron specific enolase with resolved substrate and product and an analogous complex with two inhibitors indicate subunit interaction and inhibitor cooperativity.
J.Inorg.Biochem., 111, 2012
3UO5
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Aurora A in complex with YL1-038-31
分子名称: 4-{[4-(phenylamino)pyrimidin-2-yl]amino}benzoic acid, Serine/Threonine-Protein Kinase 6
著者Martin, M.P, Zhu, J.-Y, Schonbrunn, E.
登録日2011-11-16
公開日2012-01-25
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.7012 Å)
主引用文献A Novel Mechanism by Which Small Molecule Inhibitors Induce the DFG Flip in Aurora A.
Acs Chem.Biol., 7, 2012
3UOD
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Aurora A in complex with RPM1693
分子名称: 1,2-ETHANEDIOL, 4-[(4-{[2-(trifluoromethyl)phenyl]amino}pyrimidin-2-yl)amino]benzoic acid, Aurora kinase A, ...
著者Martin, M.P, Zhu, J.-Y, Schonbrunn, E.
登録日2011-11-16
公開日2012-01-25
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.5002 Å)
主引用文献A Novel Mechanism by Which Small Molecule Inhibitors Induce the DFG Flip in Aurora A.
Acs Chem.Biol., 7, 2012
3UVN
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Crystal structure of WDR5 in complex with the WDR5-interacting motif of SET1A
分子名称: Histone-lysine N-methyltransferase SETD1A, WD repeat-containing protein 5
著者Zhang, P, Lee, H, Brunzelle, J.S, Couture, J.-F.
登録日2011-11-30
公開日2011-12-14
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.792 Å)
主引用文献The plasticity of WDR5 peptide-binding cleft enables the binding of the SET1 family of histone methyltransferases.
Nucleic Acids Res., 40, 2012
8WY7
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Crystal Structure of the first bromodomain of human BRD4 in complex with the inhibitor 22
分子名称: 2-[[5-[2-(4-fluoranyl-2,6-dimethyl-phenoxy)-5-(2-oxidanylpropan-2-yl)phenyl]-1-methyl-2-oxidanylidene-pyridin-4-yl]amino]-~{N}-(4-oxidanylcyclohexyl)ethanamide, Bromodomain-containing protein 4
著者Xu, H, Zhao, X, Shen, H, Xu, Y, Wu, X.
登録日2023-10-30
公開日2024-01-24
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.83 Å)
主引用文献Discovery of Novel Phenoxyaryl Pyridones as Bromodomain and Extra-Terminal Domain (BET) Inhibitors with High Selectivity for the Second Bromodomain (BD2) to Potentially Treat Acute Myeloid Leukemia.
J.Med.Chem., 67, 2024
8WNY
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Cryo EM map of SLC7A10-SLC3A2 complex in the D-serine bound state
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Amino acid transporter heavy chain SLC3A2, Asc-type amino acid transporter 1, ...
著者Li, Y.N, Guo, Y.Y, Dai, L, Yan, R.H.
登録日2023-10-06
公開日2024-05-15
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献Cryo-EM structure of the human Asc-1 transporter complex.
Nat Commun, 15, 2024
8WA8
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Human transketolase in complex with phosphite
分子名称: 1,2-ETHANEDIOL, CALCIUM ION, PHOSPHITE ION, ...
著者Liu, Z, Tittmann, K, Dai, S.
登録日2023-09-07
公開日2024-01-24
実験手法X-RAY DIFFRACTION (1.48 Å)
主引用文献Multifaceted Role of the Substrate Phosphate Group in Transketolase Catalysis
Acs Catalysis, 14, 2024

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件を2024-08-14に公開中

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