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4W5M
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Prp peptide
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, PrP peptide
著者Yu, L, Lee, S.-J, Yee, V.
登録日2014-08-18
公開日2015-05-27
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.2 Å)
主引用文献Crystal Structures of Polymorphic Prion Protein beta 1 Peptides Reveal Variable Steric Zipper Conformations.
Biochemistry, 54, 2015
8Q29
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TtX122A - A domain of unknown function from the Teredinibacter turnerae protein TERTU_3803
分子名称: 1,2-ETHANEDIOL, CALCIUM ION, Gluconolactonase domain protein, ...
著者Rajagopal, B.S, Hemsworth, G.R.
登録日2023-08-01
公開日2024-03-13
最終更新日2024-11-20
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Structural dissection of two redox proteins from the shipworm symbiont Teredinibacter turnerae.
Iucrj, 11, 2024
4W5Y
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Crystal structure of Prp pepttide
分子名称: Prp peptide
著者Yu, L, Lee, S.-J, Yee, V.
登録日2014-08-19
公開日2015-05-27
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.122 Å)
主引用文献Crystal Structures of Polymorphic Prion Protein beta 1 Peptides Reveal Variable Steric Zipper Conformations.
Biochemistry, 54, 2015
6NEL
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BU of 6nel by Molmil
4-(2-(4-fluorophenyl)-5-hydroxy-6-oxo-1,6-dihydropyridin-3-yl)benzoic acid bound to influenza 2009 pH1N1 endonuclease
分子名称: 4-[2-(4-fluorophenyl)-5-hydroxy-6-oxo-1,6-dihydropyridin-3-yl]benzoic acid, MAGNESIUM ION, MANGANESE (II) ION, ...
著者Bauman, J.D, Arnold, E.
登録日2018-12-17
公開日2019-05-01
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Aryl and Arylalkyl Substituted 3-Hydroxypyridin-2(1H)-ones: Synthesis and Evaluation as Inhibitors of Influenza A Endonuclease.
Chemmedchem, 14, 2019
7OC8
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BU of 7oc8 by Molmil
Trichoderma reesei Cel7A E212Q mutant in complex with pNPL
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, COBALT (II) ION, Exoglucanase 1, ...
著者Haataja, T, Sandgren, M, Stahlberg, J.
登録日2021-04-26
公開日2022-03-09
最終更新日2024-11-06
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Enzyme kinetics by GH7 cellobiohydrolases on chromogenic substrates is dictated by non-productive binding: insights from crystal structures and MD simulation.
Febs J., 290, 2023
7OFL
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BU of 7ofl by Molmil
Crystal structure of the sesquiterpene synthase Copu9 from coniophora puteana in complex with alendronate
分子名称: 1,2-ETHANEDIOL, 4-AMINO-1-HYDROXYBUTANE-1,1-DIYLDIPHOSPHONATE, MAGNESIUM ION, ...
著者Dimos, N, Loll, B.
登録日2021-05-05
公開日2022-03-16
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.83 Å)
主引用文献Biotechnological potential and initial characterization of two novel sesquiterpene synthases from Basidiomycota Coniophora puteana for heterologous production of delta-cadinol.
Microb Cell Fact, 21, 2022
7NYT
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BU of 7nyt by Molmil
Trichoderma reesei Cel7A E212Q mutant in complex with lactose.
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, COBALT (II) ION, Exoglucanase 1, ...
著者Haataja, T, Sandgren, M, Stahlberg, J.
登録日2021-03-23
公開日2022-03-09
最終更新日2024-11-20
実験手法X-RAY DIFFRACTION (1.09 Å)
主引用文献Enzyme kinetics by GH7 cellobiohydrolases on chromogenic substrates is dictated by non-productive binding: insights from crystal structures and MD simulation.
Febs J., 290, 2023
8QAB
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BU of 8qab by Molmil
X-ray crystal structure of a de novo designed antiparallel coiled-coil hexameric alpha-helical barrel with 4 heptad repeats, apCCHex
分子名称: 1-methoxy-2-[2-[2-[2-[2-[2-[2-[2-[2-[2-(2-methoxyethoxy)ethoxy]ethoxy]ethoxy]ethoxy]ethoxy]ethoxy]ethoxy]ethoxy]ethoxy]ethane, apCCHex
著者Naudin, E.N, Albanese, K.I, Petrenas, R, Woolfson, D.N.
登録日2023-08-22
公開日2024-07-03
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Rationally seeded computational protein design of ɑ-helical barrels.
Nat.Chem.Biol., 20, 2024
7CSK
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A 2:1 stoichiometric complex of anticancer drug Adriamycin bound to parallel G-quadruplex DNA [d-(TTGGGGT)]4.
分子名称: DNA (5'-D(*TP*TP*GP*GP*GP*GP*T)-3'), DOXORUBICIN
著者Barthwal, R, Tariq, Z, Pandav, K.
登録日2020-08-15
公開日2021-08-18
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献A 2:1 stoichiometric complex of anticancer drug Adriamycin bound to parallel G-quadruplex DNA [d-(TTGGGGT)]4.
To Be Published
8GII
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BU of 8gii by Molmil
TEM-1 Beta Lactamase Variant 80.a
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, TEM-1 Variant 80.a
著者Fram, B.F, Gauthier, N.P, Khan, A.R, Sander, C.
登録日2023-03-14
公開日2024-04-17
最終更新日2024-07-17
実験手法X-RAY DIFFRACTION (1.83 Å)
主引用文献Simultaneous enhancement of multiple functional properties using evolution-informed protein design.
Nat Commun, 15, 2024
8GIJ
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TEM-1 Beta Lactamase Variant 80.b
分子名称: TEM-1 Beta Lactmase Variant 80.b
著者Fram, B.F, Gauthier, N.P, Khan, A, Sander, C.
登録日2023-03-14
公開日2024-04-17
最終更新日2024-07-17
実験手法X-RAY DIFFRACTION (1.59 Å)
主引用文献Simultaneous enhancement of multiple functional properties using evolution-informed protein design.
Nat Commun, 15, 2024
6VDU
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BU of 6vdu by Molmil
Crystal Structure of Dehaloperoxidase B in Complex with cofactor Iron(III) Deuteroporphyrin IX and Substrate Trichlorophenol
分子名称: 1,2-ETHANEDIOL, 2,4,6-trichlorophenol, DI(HYDROXYETHYL)ETHER, ...
著者Ghiladi, R.A, de Serrano, V.S, McGuire, A, Malewschik, T.
登録日2019-12-27
公開日2020-12-30
最終更新日2024-12-25
実験手法X-RAY DIFFRACTION (1.98 Å)
主引用文献Nonnative Heme Incorporation into Multifunctional Globin Increases Peroxygenase Activity an Order and Magnitude Compared to Native Enzyme
To Be Published
4WA4
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The crystal structure of neuraminidase from a H3N8 influenza virus isolated from New England harbor seals in complex with oseltamivir carboxylate
分子名称: (3R,4R,5S)-4-(acetylamino)-5-amino-3-(pentan-3-yloxy)cyclohex-1-ene-1-carboxylic acid, CALCIUM ION, Neuraminidase, ...
著者Yang, H, Villanueva, J.M, Gubareva, L.V, Stevens, J.
登録日2014-08-28
公開日2015-01-14
最終更新日2024-10-09
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Structural and Functional Analysis of Surface Proteins from an A(H3N8) Influenza Virus Isolated from New England Harbor Seals.
J.Virol., 89, 2015
8EDY
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BU of 8edy by Molmil
KRAS4b A146T 1-185 bound to GDP
分子名称: GTPase KRas, GUANOSINE-5'-DIPHOSPHATE
著者Betts, L, Rossman, K.L.
登録日2022-09-06
公開日2023-09-20
実験手法X-RAY DIFFRACTION (1.18 Å)
主引用文献KRAS4b A146T 1-185 bound to GDP
To Be Published
6VB4
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BU of 6vb4 by Molmil
HLA-B*15:02 complexed with a synthetic peptide
分子名称: 1,2-ETHANEDIOL, ACETATE ION, Beta-2-microglobulin, ...
著者Schutte, R.J, Li, D, Andring, J, McKenna, R, Ostrov, D.A.
登録日2019-12-18
公開日2020-11-25
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (2.334 Å)
主引用文献HLA-B*15:02 complexed with a synthetic peptide
To Be Published
6VDX
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BU of 6vdx by Molmil
Crystal Structure of Dehaloperoxidase B in Complex with cofactor Manganese(III)- Porphyrin and Substrate Trichlorophenol
分子名称: 1,2-ETHANEDIOL, 2,4,6-trichlorophenol, DI(HYDROXYETHYL)ETHER, ...
著者Ghiladi, R.A, de Serrano, V.S, McGuire, A, Malewschik, T.
登録日2019-12-27
公開日2020-12-30
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.53 Å)
主引用文献Nonnative Heme Incorporation into Multifunctional Globin Increases Peroxygenase Activity an Order and Magnitude Compared to Native Enzyme
To Be Published
6VH1
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BU of 6vh1 by Molmil
2.30 A resolution structure of MERS 3CL protease in complex with inhibitor 6h
分子名称: N~2~-{[(4,4-difluorocyclohexyl)oxy]carbonyl}-N-{(2S)-1-hydroxy-3-[(3S)-2-oxopyrrolidin-3-yl]propan-2-yl}-L-leucinamide, Orf1a protein
著者Lovell, S, Battaile, K.P, Kashipathy, M.M, Rathnayake, A.D, Zheng, J, Kim, Y, Nguyen, H.N, Chang, K.O, Groutas, W.C.
登録日2020-01-09
公開日2020-08-12
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献3C-like protease inhibitors block coronavirus replication in vitro and improve survival in MERS-CoV-infected mice.
Sci Transl Med, 12, 2020
6NCL
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BU of 6ncl by Molmil
Near-atomic structure of icosahedrally averaged PBCV-1 capsid
分子名称: Major capsid protein, P1, P10, ...
著者Fang, Q, Rossmann, M.G.
登録日2018-12-11
公開日2019-01-30
最終更新日2024-10-16
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献Near-atomic structure of a giant virus.
Nat Commun, 10, 2019
7Z3W
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BU of 7z3w by Molmil
Crystal structure of the AAL160 Fab
分子名称: 2-{2-[2-2-(METHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHANOL, AAL160 Fab heavy-chain, AAL160 Fab light-chain
著者Rondeau, J.M, Lehmann, S.
登録日2022-03-02
公開日2023-02-08
最終更新日2024-11-20
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献"Redirecting an anti-IL-1 beta antibody to bind a new, unrelated and computationally predicted epitope on hIL-17A".
Commun Biol, 6, 2023
8V36
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BU of 8v36 by Molmil
Crystal structure of DHPS-3-dehydrogenase, HpsN from Cupriavidus pinatubonensis in complex with NADH
分子名称: 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, Sulfopropanediol 3-dehydrogenase, ZINC ION
著者Lee, M.
登録日2023-11-27
公開日2024-09-25
最終更新日2024-10-09
実験手法X-RAY DIFFRACTION (2.235 Å)
主引用文献Structural and kinetic insights into the stereospecific oxidation of R -2,3-dihydroxypropanesulfonate by DHPS-3-dehydrogenase from Cupriavidus pinatubonensis.
Chem Sci, 15, 2024
6NPV
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BU of 6npv by Molmil
C-abl Kinase domain with the activator(cmpd51), N-(1-(3,4-dichlorophenyl)-4-(2-hydroxyethyl)-4,5-dihydro-1H-pyrazol-3-yl)isonicotinamide
分子名称: 4-(4-METHYL-PIPERAZIN-1-YLMETHYL)-N-[4-METHYL-3-(4-PYRIDIN-3-YL-PYRIMIDIN-2-YLAMINO)-PHENYL]-BENZAMIDE, GLYCEROL, NONAETHYLENE GLYCOL, ...
著者campobasso, N.
登録日2019-01-18
公開日2019-03-13
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.86 Å)
主引用文献Identification and Optimization of Novel Small c-Abl Kinase Activators Using Fragment and HTS Methodologies.
J. Med. Chem., 62, 2019
8V35
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Crystal structure of HpsN from Cupriavidus pinatubonensis
分子名称: 1,2-ETHANEDIOL, Sulfopropanediol 3-dehydrogenase, ZINC ION
著者Lee, M.
登録日2023-11-27
公開日2024-09-25
最終更新日2024-10-09
実験手法X-RAY DIFFRACTION (1.94 Å)
主引用文献Structural and kinetic insights into the stereospecific oxidation of R -2,3-dihydroxypropanesulfonate by DHPS-3-dehydrogenase from Cupriavidus pinatubonensis.
Chem Sci, 15, 2024
4W5L
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BU of 4w5l by Molmil
Crystal structure of a prp peptide
分子名称: PrP peptide
著者Yu, L, Lee, S.-J, Yee, V.
登録日2014-08-18
公開日2015-05-27
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1 Å)
主引用文献Crystal Structures of Polymorphic Prion Protein beta 1 Peptides Reveal Variable Steric Zipper Conformations.
Biochemistry, 54, 2015
8CPJ
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BU of 8cpj by Molmil
Crystal structure of PPAR gamma (PPARG) in an inactive form
分子名称: 1,2-ETHANEDIOL, Peroxisome proliferator-activated receptor gamma
著者Chaikuad, A, Merk, D, Knapp, S, Structural Genomics Consortium (SGC)
登録日2023-03-02
公開日2023-07-12
最終更新日2024-06-19
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Targeting the Alternative Vitamin E Metabolite Binding Site Enables Noncanonical PPAR gamma Modulation.
J.Am.Chem.Soc., 145, 2023
6NJJ
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Crystal Structure of the PDE4D Catalytic Domain and UCR2 Regulatory Helix with BPN14770
分子名称: (4-{[2-(3-chlorophenyl)-6-(trifluoromethyl)pyridin-4-yl]methyl}phenyl)acetic acid, 1,2-ETHANEDIOL, 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, ...
著者Fox III, D, Fairman, J.W, Gurney, M.E.
登録日2019-01-03
公開日2019-05-08
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Design and Synthesis of Selective Phosphodiesterase 4D (PDE4D) Allosteric Inhibitors for the Treatment of Fragile X Syndrome and Other Brain Disorders.
J.Med.Chem., 62, 2019

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