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8UN8
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Solution conformations of a 12-mer peptide bearing a natural N-hydrophobic triangle
分子名称: ACE-LEU-ASP-ALA-ALA-LEU-LEU-ALA-ALA-ALA-LYS-ALA-TRP-NH2 peptide
著者Mi, T.X, Burgess, K.
登録日2023-10-18
公開日2024-06-05
実験手法SOLUTION NMR
主引用文献Bioinformatics leading to conveniently accessible, helix enforcing, bicyclic ASX motif mimics (BAMMs).
Nat Commun, 15, 2024
8U8X
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crystal structure of the receptor tyrosine kinase Human HER2 (ERBB2) YVMA mutant kinase domain in complex with inhibitor compound 27
分子名称: 1-{(1R,3r,5S)-3-[(3M)-4-methyl-3-{3-methyl-4-[(1-methyl-1H-benzimidazol-5-yl)oxy]phenyl}-1H-pyrazolo[3,4-d]pyrimidin-1-yl]-8-azabicyclo[3.2.1]octan-8-yl}propan-1-one, CHLORIDE ION, DI(HYDROXYETHYL)ETHER, ...
著者Wang, J, Mou, T.C.
登録日2023-09-18
公開日2024-06-12
最終更新日2024-06-26
実験手法X-RAY DIFFRACTION (1.69 Å)
主引用文献Discovery of Potent and Selective Covalent Inhibitors of HER2 WT and HER2 YVMA .
J.Med.Chem., 67, 2024
8FEZ
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Prefusion-stabilized SARS-CoV-2 spike protein
分子名称: Spike glycoprotein
著者Gonzalez, K.J, Mousa, J.J, Strauch, E.M.
登録日2022-12-07
公開日2023-04-12
実験手法ELECTRON MICROSCOPY (3.72 Å)
主引用文献A general computational design strategy for stabilizing viral class I fusion proteins.
Biorxiv, 2023
8FR6
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Antibody vFP53.02 in complex with HIV-1 envelope trimer BG505 DS-SOSIP
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Envelope glycoprotein gp120, ...
著者Wang, S, Kwong, P.D.
登録日2023-01-06
公開日2023-04-19
最終更新日2023-06-07
実験手法ELECTRON MICROSCOPY (2.5 Å)
主引用文献Diverse Murine Vaccinations Reveal Distinct Antibody Classes to Target Fusion Peptide and Variation in Peptide Length to Improve HIV Neutralization.
J.Virol., 97, 2023
9AZX
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Crystal structure of SARS-CoV-2 (Covid-19) Nsp3 macrodomain in complex with NDPr
分子名称: Non-structural protein 3, {(2R,3S,4R,5R)-5-[(8S)-4-aminopyrrolo[2,1-f][1,2,4]triazin-7-yl]-5-cyano-3,4-dihydroxyoxolan-2-yl}methyl [(2R,3S,4R,5R)-3,4,5-trihydroxyoxolan-2-yl]methyl dihydrogen diphosphate
著者Wallace, S.D, Bagde, S.R, Fromme, J.C.
登録日2024-03-11
公開日2024-05-01
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (1.395 Å)
主引用文献GS-441524-Diphosphate-Ribose Derivatives as Nanomolar Binders and Fluorescence Polarization Tracers for SARS-CoV-2 and Other Viral Macrodomains.
Acs Chem.Biol., 19, 2024
8UR9
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Crystal Structure of the SARS-CoV-2 Main Protease in Complex with Compound 61
分子名称: (5P)-5-[(1P,3M,3'P)-3-{3-chloro-5-[(2-chlorophenyl)methoxy]-4-fluorophenyl}-2-oxo-2H-[1,3'-bipyridin]-5-yl]-1-methylpyrimidine-2,4(1H,3H)-dione, 3C-like proteinase nsp5
著者Papini, C, Zhang, C.H, Jorgensen, W.L, Anderson, K.S.
登録日2023-10-25
公開日2024-05-15
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Proof-of-concept studies with a computationally designed M pro inhibitor as a synergistic combination regimen alternative to Paxlovid.
Proc.Natl.Acad.Sci.USA, 121, 2024
9LDT
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DESIGN AND SYNTHESIS OF NEW ENZYMES BASED ON THE LACTATE DEHYDROGENASE FRAMEWORK
分子名称: LACTATE DEHYDROGENASE, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, OXAMIC ACID, ...
著者Dunn, C.R, Holbrook, J.J, Muirhead, H.
登録日1991-11-26
公開日1993-10-31
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Design and synthesis of new enzymes based on the lactate dehydrogenase framework.
Philos.Trans.R.Soc.London,Ser.B, 332, 1991
8UTB
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Alpha7-nicotinic acetylcholine receptor bound to epibatidine and NS-1738
分子名称: (2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate, (3beta,14beta,17beta,25R)-3-[4-methoxy-3-(methoxymethyl)butoxy]spirost-5-en, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Burke, S.M, Noviello, C.M, Hibbs, R.E.
登録日2023-10-30
公開日2024-02-21
最終更新日2024-03-13
実験手法ELECTRON MICROSCOPY (2.3 Å)
主引用文献Structural mechanisms of alpha 7 nicotinic receptor allosteric modulation and activation.
Cell, 187, 2024
7VSW
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Crystal structure of a Fab-like fragment of anti-mesothelin antibody
分子名称: heavy chain, light chain
著者Yang, Z, Ying, T.
登録日2021-10-27
公開日2021-12-15
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Design of a Novel Fab-Like Antibody Fragment with Enhanced Stability and Affinity for Clinical use.
Small Methods, 6, 2022
8UT1
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Alpha7-nicotinic acetylcholine receptor bound to epibatidine
分子名称: (2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate, (3beta,14beta,17beta,25R)-3-[4-methoxy-3-(methoxymethyl)butoxy]spirost-5-en, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Burke, S.M, Hibbs, R.E, Noviello, C.M.
登録日2023-10-30
公開日2024-02-21
最終更新日2024-03-13
実験手法ELECTRON MICROSCOPY (2.3 Å)
主引用文献Structural mechanisms of alpha 7 nicotinic receptor allosteric modulation and activation.
Cell, 187, 2024
8V8C
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Alpha7-nicotinic acetylcholine receptor time resolved bound to epibatidine and PNU-120596 asymmetric state 1
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
著者Burke, S.M, Noviello, C.M, Hibbs, R.E.
登録日2023-12-05
公開日2024-02-21
最終更新日2024-03-13
実験手法ELECTRON MICROSCOPY (3.29 Å)
主引用文献Structural mechanisms of alpha 7 nicotinic receptor allosteric modulation and activation.
Cell, 187, 2024
7VSU
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Crystal structure of Fab fragment of anti-mesothelin antibody
分子名称: Light chain, heavy chain
著者Yang, Z, Ying, T.
登録日2021-10-27
公開日2021-12-15
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Design of a Novel Fab-Like Antibody Fragment with Enhanced Stability and Affinity for Clinical use.
Small Methods, 6, 2022
6OBL
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JAK2 JH2 in complex with JAK168
分子名称: Tyrosine-protein kinase JAK2, [4-({5-amino-3-[(4-cyanophenyl)amino]-1H-1,2,4-triazole-1-carbonyl}amino)phenoxy]acetic acid
著者Krimmer, S.G, Liosi, M.E, Schlessinger, J, Jorgensen, W.L.
登録日2019-03-21
公開日2020-03-25
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.061 Å)
主引用文献Selective Janus Kinase 2 (JAK2) Pseudokinase Ligands with a Diaminotriazole Core.
J.Med.Chem., 63, 2020
8V88
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Alpha7-nicotinic acetylcholine receptor bound to epibatidine and GAT107
分子名称: (2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate, (3aR,4S,9bS)-4-(4-bromophenyl)-3a,4,5,9b-tetrahydro-3H-cyclopenta[c]quinoline-8-sulfonamide, (3beta,14beta,17beta,25R)-3-[4-methoxy-3-(methoxymethyl)butoxy]spirost-5-en, ...
著者Burke, S.M, Noviello, C.M, Hibbs, R.E.
登録日2023-12-05
公開日2024-02-21
最終更新日2024-03-13
実験手法ELECTRON MICROSCOPY (2.3 Å)
主引用文献Structural mechanisms of alpha 7 nicotinic receptor allosteric modulation and activation.
Cell, 187, 2024
8V82
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Alpha7-nicotinic acetylcholine receptor bound to epibatidine and PNU-120596
分子名称: (2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate, (3beta,14beta,17beta,25R)-3-[4-methoxy-3-(methoxymethyl)butoxy]spirost-5-en, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Burke, S.M, Noviello, C.M, Hibbs, R.E.
登録日2023-12-04
公開日2024-02-21
最終更新日2024-03-13
実験手法ELECTRON MICROSCOPY (2.61 Å)
主引用文献Structural mechanisms of alpha 7 nicotinic receptor allosteric modulation and activation.
Cell, 187, 2024
6I9Y
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The 2.14 A X-ray crystal structure of Sporosarcina pasteurii urease in complex with Au(I) ions
分子名称: 1,2-ETHANEDIOL, GOLD ION, HYDROXIDE ION, ...
著者Mazzei, L, Cianci, M, Ciurli, S.
登録日2018-11-26
公開日2019-05-01
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.14 Å)
主引用文献Inhibition Mechanism of Urease by Au(III) Compounds Unveiled by X-ray Diffraction Analysis.
Acs Med.Chem.Lett., 10, 2019
8V80
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Alpha7-nicotinic acetylcholine receptor bound to epibatidine and (-)-TQS
分子名称: (2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate, (3aR,4S,9bS)-4-(naphthalen-1-yl)-3a,4,5,9b-tetrahydro-3H-cyclopenta[c]quinoline-8-sulfonamide, (3beta,14beta,17beta,25R)-3-[4-methoxy-3-(methoxymethyl)butoxy]spirost-5-en, ...
著者Burke, S.M, Noviello, C.M, Hibbs, R.E.
登録日2023-12-04
公開日2024-02-21
最終更新日2024-03-13
実験手法ELECTRON MICROSCOPY (2.34 Å)
主引用文献Structural mechanisms of alpha 7 nicotinic receptor allosteric modulation and activation.
Cell, 187, 2024
8V8D
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BU of 8v8d by Molmil
Alpha7-nicotinic acetylcholine receptor time resolved bound to epibatidine and PNU-120596 asymmetric state 2
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
著者Burke, S.M, Noviello, C.M, Hibbs, R.E.
登録日2023-12-05
公開日2024-02-21
最終更新日2024-03-13
実験手法ELECTRON MICROSCOPY (3.31 Å)
主引用文献Structural mechanisms of alpha 7 nicotinic receptor allosteric modulation and activation.
Cell, 187, 2024
8V8A
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BU of 8v8a by Molmil
Alpha7-nicotinic acetylcholine receptor time resolved bound to epibatidine and PNU-120596 desensitized intermediate state
分子名称: (2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate, (3beta,14beta,17beta,25R)-3-[4-methoxy-3-(methoxymethyl)butoxy]spirost-5-en, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Burke, S.M, Noviello, C.M, Hibbs, R.E.
登録日2023-12-05
公開日2024-02-21
最終更新日2024-03-13
実験手法ELECTRON MICROSCOPY (2.19 Å)
主引用文献Structural mechanisms of alpha 7 nicotinic receptor allosteric modulation and activation.
Cell, 187, 2024
9LDB
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DESIGN AND SYNTHESIS OF NEW ENZYMES BASED ON THE LACTATE DEHYDROGENASE FRAMEWORK
分子名称: LACTATE DEHYDROGENASE, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, OXAMIC ACID, ...
著者Dunn, C.R, Holbrook, J.J, Muirhead, H.
登録日1991-11-26
公開日1993-10-31
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Design and synthesis of new enzymes based on the lactate dehydrogenase framework.
Philos.Trans.R.Soc.London,Ser.B, 332, 1991
8V89
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BU of 8v89 by Molmil
Alpha7-nicotinic acetylcholine receptor time resolved resting state
分子名称: (2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate, (3beta,14beta,17beta,25R)-3-[4-methoxy-3-(methoxymethyl)butoxy]spirost-5-en, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Burke, S.M, Noviello, C.M, Hibbs, R.E.
登録日2023-12-05
公開日2024-02-21
最終更新日2024-03-13
実験手法ELECTRON MICROSCOPY (2.53 Å)
主引用文献Structural mechanisms of alpha 7 nicotinic receptor allosteric modulation and activation.
Cell, 187, 2024
8XHR
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Crystal structure of Mycobacterium tuberculosis MenT3 bound with CTP
分子名称: CYTIDINE-5'-TRIPHOSPHATE, Nucleotidyl transferase AbiEii/AbiGii toxin family protein
著者Liu, J, Yashiro, Y, Tomita, K.
登録日2023-12-18
公開日2024-02-28
最終更新日2024-06-19
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Substrate specificity of Mycobacterium tuberculosis tRNA terminal nucleotidyltransferase toxin MenT3.
Nucleic Acids Res., 52, 2024
8V86
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Alpha7-nicotinic acetylcholine receptor bound to GAT107
分子名称: (2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate, (3aR,4S,9bS)-4-(4-bromophenyl)-3a,4,5,9b-tetrahydro-3H-cyclopenta[c]quinoline-8-sulfonamide, (3beta,14beta,17beta,25R)-3-[4-methoxy-3-(methoxymethyl)butoxy]spirost-5-en, ...
著者Burke, S.M, Noviello, C.M, Hibbs, R.E.
登録日2023-12-04
公開日2024-02-21
最終更新日2024-03-13
実験手法ELECTRON MICROSCOPY (2.47 Å)
主引用文献Structural mechanisms of alpha 7 nicotinic receptor allosteric modulation and activation.
Cell, 187, 2024
8UZJ
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Alpha7-nicotinic acetylcholine receptor bound to epibatidine and ivermectin
分子名称: (2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate, (2aE,4E,5'S,6S,6'R,7S,8E,11R,13R,15S,17aR,20R,20aR,20bS)-6'-[(2S)-butan-2-yl]-20,20b-dihydroxy-5',6,8,19-tetramethyl-17 -oxo-3',4',5',6,6',10,11,14,15,17,17a,20,20a,20b-tetradecahydro-2H,7H-spiro[11,15-methanofuro[4,3,2-pq][2,6]benzodioxacy clooctadecine-13,2'-pyran]-7-yl 2,6-dideoxy-4-O-(2,6-dideoxy-3-O-methyl-alpha-L-arabino-hexopyranosyl)-3-O-methyl-alpha-L-arabino-hexopyranoside, (3beta,14beta,17beta,25R)-3-[4-methoxy-3-(methoxymethyl)butoxy]spirost-5-en, ...
著者Burke, S.M, Noviello, C.M, Hibbs, R.E.
登録日2023-11-15
公開日2024-02-21
最終更新日2024-03-13
実験手法ELECTRON MICROSCOPY (2.3 Å)
主引用文献Structural mechanisms of alpha 7 nicotinic receptor allosteric modulation and activation.
Cell, 187, 2024
6OF5
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The crystal structure of dodecyloxy(naphthalen-1-yl)methylphosphonic acid in complex with red kidney bean purple acid phosphatase
分子名称: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, FE (III) ION, ...
著者Feder, D, Schenk, G, Guddat, L.W, Hussein, W.M, McGeary, R.P.
登録日2019-03-28
公開日2019-09-04
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Synthesis, evaluation and structural investigations of potent purple acid phosphatase inhibitors as drug leads for osteoporosis.
Eur.J.Med.Chem., 182, 2019

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件を2024-07-17に公開中

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