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3FY5
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Dishevelled PDZ domain homodimer
分子名称: Segment polarity protein dishevelled homolog DVL-2
著者Earnest, T, Friedland, N, Hung, L.-W, Moon, R.
登録日2009-01-21
公開日2009-09-08
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献

3EGH
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Crystal structure of a complex between Protein Phosphatase 1 alpha (PP1), the PP1 binding and PDZ domains of Spinophilin and the small natural molecular toxin Nodularin-R
分子名称: GLYCEROL, MANGANESE (II) ION, Serine/threonine-protein phosphatase PP1-alpha catalytic subunit, ...
著者Ragusa, M.J, Page, R, Peti, W.
登録日2008-09-10
公開日2010-03-23
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Spinophilin directs protein phosphatase 1 specificity by blocking substrate binding sites.
Nat.Struct.Mol.Biol., 17, 2010
3EGG
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Crystal structure of a complex between Protein Phosphatase 1 alpha (PP1) and the PP1 binding and PDZ domains of Spinophilin
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, GLYCEROL, MANGANESE (II) ION, ...
著者Ragusa, M.J, Page, R, Peti, W.
登録日2008-09-10
公開日2010-03-23
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Spinophilin directs protein phosphatase 1 specificity by blocking substrate binding sites.
Nat.Struct.Mol.Biol., 17, 2010
3E17
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Crystal structure of the second PDZ domain from human Zona Occludens-2
分子名称: Tight junction protein ZO-2
著者Chen, H, Tong, S.L, Teng, M.K, Niu, L.W.
登録日2008-08-01
公開日2009-07-21
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Structure of the second PDZ domain from human zonula occludens 2
Acta Crystallogr.,Sect.F, 65, 2009
3DJ3
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Crystal Structure of C-terminal Truncated TIP-1 (6-113)
分子名称: Tax1-binding protein 3
著者Shen, Y.
登録日2008-06-21
公開日2008-10-21
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structural Basis of beta-Catenin Recognition by Tax-interacting Protein-1
J.Mol.Biol., 384, 2008
3DJ1
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crystal structure of TIP-1 wild type
分子名称: SULFATE ION, Tax1-binding protein 3
著者Shen, Y.
登録日2008-06-21
公開日2008-10-21
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structural Basis of beta-Catenin Recognition by Tax-interacting Protein-1
J.Mol.Biol., 384, 2008
3DIW
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c-terminal beta-catenin bound TIP-1 structure
分子名称: Tax1-binding protein 3, decameric peptide form Catenin beta-1
著者Shen, Y.
登録日2008-06-21
公開日2008-10-21
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structural Basis of beta-Catenin Recognition by Tax-interacting Protein-1
J.Mol.Biol., 384, 2008
3CYY
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BU of 3cyy by Molmil
The crystal structure of ZO-1 PDZ2 in complex with the Cx43 peptide
分子名称: Tight junction protein ZO-1, peptide from Gap junction alpha-1 protein
著者Pan, L, Zhang, M.
登録日2008-04-27
公開日2008-09-23
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Domain-swapped dimerization of ZO-1 PDZ2 generates specific and regulatory connexin43-binding sites
Embo J., 27, 2008
3CS0
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BU of 3cs0 by Molmil
Crystal structure of DegP24
分子名称: Periplasmic serine endoprotease DegP, pentapeptide
著者Krojer, T, Sawa, J, Schaefer, E, Saibil, H.R, Ehrmann, M, Clausen, T.
登録日2008-04-08
公開日2008-05-27
最終更新日2019-11-13
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Structural basis for the regulated protease and chaperone function of DegP
Nature, 453, 2008
3CH8
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The crystal structure of PDZ-Fibronectin fusion protein
分子名称: C-terminal octapeptide from protein ARVCF, MAGNESIUM ION, fusion protein PDZ-Fibronectin,Fibronectin
著者Makabe, K, Huang, J, Koide, A, Koide, S.
登録日2008-03-08
公開日2009-03-31
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structural basis for exquisite specificity of affinity clamps, synthetic binding proteins generated through directed domain-interface evolution.
J.Mol.Biol., 392, 2009
3CC0
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The Dvl2 PDZ Domain in Complex with the N3 Inhibitory Peptide
分子名称: Dishevelled-2
著者Appleton, B.A, Wiesmann, C.
登録日2008-02-23
公開日2009-03-03
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Inhibition of Wnt signaling by Dishevelled PDZ peptides
Nat.Chem.Biol., 5, 2009
3CBZ
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The Dvl2 PDZ Domain in Complex with the N2 Inhibitory Peptide
分子名称: 1,2-ETHANEDIOL, Dishevelled-2, PHOSPHATE ION
著者Appleton, B.A, Wiesmann, C.
登録日2008-02-23
公開日2009-03-03
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.38 Å)
主引用文献Inhibition of Wnt signaling by Dishevelled PDZ peptides
Nat.Chem.Biol., 5, 2009
3CBY
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The Dvl2 PDZ Domain in Complex with the N1 Inhibitory Peptide
分子名称: 1,2-ETHANEDIOL, Dishevelled-2
著者Appleton, B.A, Wiesmann, C.
登録日2008-02-23
公開日2009-03-03
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Inhibition of Wnt signaling by Dishevelled PDZ peptides
Nat.Chem.Biol., 5, 2009
3CBX
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The Dvl2 PDZ Domain in Complex with the C1 Inhibitory Peptide
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, CHLORIDE ION, Dishevelled-2
著者Appleton, B.A, Wiesmann, C.
登録日2008-02-23
公開日2009-03-03
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Inhibition of Wnt signaling by Dishevelled PDZ peptides
Nat.Chem.Biol., 5, 2009
3BPU
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BU of 3bpu by Molmil
Crystal structure of the 3rd PDZ domain of human membrane associated guanylate kinase, C677S and C709S double mutant
分子名称: Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1, ZINC ION
著者Pilka, E.S, Hozjan, V, Cooper, C, Pike, A.C.W, Elkins, J, Doyle, D.A, von Delft, F, Arrowsmith, C.H, Edwards, A.M, Weigelt, J, Oppermann, U, Structural Genomics Consortium (SGC)
登録日2007-12-19
公開日2008-01-08
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Crystal structure of the 3rd PDZ domain of human membrane associated guanylate kinase, C677S and C709S double mutant.
To be Published
3B76
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Crystal structure of the third PDZ domain of human ligand-of-numb protein-X (LNX1) in complex with the C-terminal peptide from the coxsackievirus and adenovirus receptor
分子名称: 1,2-ETHANEDIOL, E3 ubiquitin-protein ligase LNX, SODIUM ION
著者Ugochukwu, E, Burgess-Brown, N, Berridge, G, Elkins, J, Bunkoczi, G, Pike, A.C.W, Sundstrom, M, Arrowsmith, C.H, Weigelt, J, Edwards, A.M, Gileadi, O, von Delft, F, Doyle, D, Structural Genomics Consortium (SGC)
登録日2007-10-30
公開日2007-11-13
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Crystal structure of the third PDZ domain of human ligand-of-numb protein-X (LNX1) in complex with the C-terminal peptide from the coxsackievirus and adenovirus receptor.
To be Published
3AXA
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BU of 3axa by Molmil
Crystal structure of afadin PDZ domain in complex with the C-terminal peptide from nectin-3
分子名称: Afadin, Nectin-3
著者Fujiwara, Y, Goda, N, Narita, H, Satomura, K, Nakagawa, A, Sakisaka, T, Suzuki, M, Hiroaki, H.
登録日2011-03-31
公開日2012-04-25
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.78 Å)
主引用文献Crystal structure of afadin PDZ domain-nectin-3 complex shows the structural plasticity of the ligand-binding site.
Protein Sci., 24, 2015
2ZPM
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BU of 2zpm by Molmil
Crystal structure analysis of PDZ domain B
分子名称: Regulator of sigma E protease
著者Inaba, K, Suzuki, M.
登録日2008-07-17
公開日2008-10-21
最終更新日2017-10-11
実験手法X-RAY DIFFRACTION (0.98 Å)
主引用文献Crystal Structure analysis of PDZ-domain B
To be Published
2ZLE
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BU of 2zle by Molmil
Cryo-EM structure of DegP12/OMP
分子名称: Outer membrane protein C, Protease do
著者Schaefer, E, Saibil, H.R.
登録日2008-04-09
公開日2008-06-03
最終更新日2024-03-13
実験手法ELECTRON MICROSCOPY (28 Å)
主引用文献Structural basis for the regulated protease and chaperone function of DegP
Nature, 453, 2008
2Z17
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Crystal structure of PDZ domain from human Pleckstrin homology, Sec7
分子名称: Pleckstrin homology Sec7 and coiled-coil domains-binding protein
著者Kishishita, S, Nishino, A, Murayama, K, Terada, T, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2007-05-08
公開日2008-05-13
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Crystal structure of PDZ domain from human Pleckstrin homology, Sec7
To be Published
2YUB
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BU of 2yub by Molmil
Solution structure of the PDZ domain from mouse LIM domain kinase
分子名称: LIM domain kinase 2
著者Hayashi, F, Suetake, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2007-04-06
公開日2008-04-08
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Solution structure of the PDZ domain from mouse LIM domain kinase
To be Published
2YT8
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BU of 2yt8 by Molmil
Solution structure of the PDZ domain of Amyloid beta A4 precursor protein-binding family A member 3 (Neuron- specific X11L2 protein) (Neuronal Munc18-1-interacting protein 3) (Mint-3) (Adapter protein X11gamma)
分子名称: Amyloid beta A4 precursor protein-binding family A member 3
著者Dang, W, Muto, Y, Inoue, M, Kigawa, T, Shirouzu, M, Tarada, T, Seiki, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2007-04-05
公開日2008-04-08
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Solution structure of the PDZ domain of Amyloid beta A4 precursor protein-binding family A member 3 (Neuron- specific X11L2 protein) (Neuronal Munc18-1-interacting protein 3) (Mint-3) (Adapter protein X11gamma)
To be Published
2YT7
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Solution structure of the PDZ domain of Amyloid beta A4 precursor protein-binding family A member 3
分子名称: Amyloid beta A4 precursor protein-binding family A member 3
著者Dang, W, Muto, Y, Inoue, M, Kigawa, T, Shirouzu, M, Tarada, T, Seiki, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2007-04-05
公開日2008-04-15
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Solution structure of the PDZ domain of Amyloid beta A4 precursor protein-binding family A member 3
To be Published
2XKX
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Single particle analysis of PSD-95 in negative stain
分子名称: DISKS LARGE HOMOLOG 4
著者Fomina, S, Howard, T.D, Sleator, O.K, Golovanova, M, O'Ryan, L, Leyland, M.L, Grossmann, J.G, Collins, R.F, Prince, S.M.
登録日2010-07-15
公開日2011-07-20
最終更新日2024-05-08
実験手法ELECTRON MICROSCOPY (22.9 Å), SOLUTION SCATTERING
主引用文献Self-Directed Assembly and Clustering of the Cytoplasmic Domains of Inwardly Rectifying Kir2.1 Potassium Channels on Association with Psd-95
Biochim.Biophys.Acta, 1808, 2011
2X7Z
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Crystal Structure of the SAP97 PDZ2 I342W C378A mutant protein domain
分子名称: AMMONIUM ION, DISKS LARGE HOMOLOG 1, IMIDAZOLE
著者Haq, S.R, Jurgens, M.C, Chi, C.N, Elfstrom, L, Koh, C.S, Selmer, M, Gianni, S, Jemth, P.
登録日2010-03-04
公開日2010-03-31
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献The Plastic Energy Landscape of Protein Folding: A Triangular Folding Mechanism with an Equilibrium Intermediate for a Small Protein Domain.
J.Biol.Chem., 285, 2010

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