PDB: 20503 件ウェブページステータス検索Chemie searchBIRD

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1N9C	Structure and dynamics of reduced Bacillus pasteurii cytochrome c: oxidation state dependent properties and implications for electron transfer processes 分子名称: Cytochrome c-553, HEME C 著者 Bartalesi, I, Bertini, I, Rosato, A. 登録日 2002-11-23 公開日 2003-02-04 最終更新日 2022-02-23 実験手法 SOLUTION NMR 主引用文献 Structure and dynamics of reduced Bacillus pasteurii cytochrome c: oxidation state dependent properties and implications for electron transfer processes Biochemistry, 42, 2003
1OMQ	Structure of penetratin in bicellar solution 分子名称: Homeotic antennapedia protein 著者 Lindberg, M, Biverstahl, H, Graslund, A, Maler, L. 登録日 2003-02-26 公開日 2003-07-29 最終更新日 2024-05-22 実験手法 SOLUTION NMR 主引用文献 Structure and positioning comparison of two variants of penetratin in two different membrane mimicking systems by NMR Eur.J.Biochem., 270, 2003
6O56	HNH Nuclease from S. pyogenes Cas9 分子名称: CRISPR-associated endonuclease Cas9/Csn1 著者 Newton, J.C, Lisi, G.P, Jogl, G. 登録日 2019-03-01 公開日 2020-01-15 最終更新日 2023-10-11 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Allosteric Motions of the CRISPR-Cas9 HNH Nuclease Probed by NMR and Molecular Dynamics. J.Am.Chem.Soc., 142, 2020
1PIK	ESPERAMICIN A1-DNA COMPLEX, NMR, 4 STRUCTURES 分子名称: 2,4-dideoxy-3-O-methyl-4-(propan-2-ylamino)-alpha-L-threo-pentopyranose-(1-2)-4-amino-4,6-dideoxy-beta-D-glucopyranose, 2,6-dideoxy-4-S-methyl-4-thio-beta-D-ribo-hexopyranose, 2-deoxy-alpha-L-fucopyranose, ... 著者 Kumar, R.A, Ikemoto, N, Patel, D.J. 登録日 1996-12-11 公開日 1997-03-12 最終更新日 2024-05-01 実験手法 SOLUTION NMR 主引用文献 Solution Structure of the Esperamicin A1-DNA Complex J.Mol.Biol., 265, 1997
4DOB	Ternary complex of DNA polymerase beta with a dideoxy terminated primer and 2'-deoxyguanosine 5'-beta, gamma-monochlororomethylene triphosphate: Stereoselective binding of R-isomer 分子名称: 5'-O-[(R)-{[(R)-[(R)-chloro(phosphono)methyl](hydroxy)phosphoryl]oxy}(hydroxy)phosphoryl]-2'-deoxyguanosine, C C G A C C G C G C A T C A G C, CHLORIDE ION, ... 著者 Batra, V.K. 登録日 2012-02-09 公開日 2012-06-13 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (2.05 Å) 主引用文献 Beta,Gamma-CHF- and beta,gamma-CHCl-dGTP Diastereomers: Synthesis, Discrete (31)P NMR Signatures, and Absolute Configurations of New Stereochemical Probes for DNA Polymerases J.Am.Chem.Soc., 134, 2012
4DOA	Ternary complex of dna polymerase beta with a dideoxy terminated primer and 2'-deoxyguanosine 5'-beta, gamma-monofluoromethylene triphosphate: non-interactive binding of s-isomer 分子名称: 2'-deoxy-5'-O-[(R)-{[(R)-[(S)-fluoro(phosphono)methyl](hydroxy)phosphoryl]oxy}(hydroxy)phosphoryl]guanosine, C C G A C C G C G C A T C A G C, CHLORIDE ION, ... 著者 Batra, V.K. 登録日 2012-02-09 公開日 2012-06-13 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (2.051 Å) 主引用文献 Beta,gamma-CHF- and beta,gamma-CHCl-dGTP Diastereomers: Synthesis, Discrete (31)P NMR Signatures, and Absolute Configurations of New Stereochemical Probes for DNA Polymerases J.Am.Chem.Soc., 134, 2012
1PUN	Solution Structure of the MutT Pyrophosphohydrolase Complexed with Mg(2+) and 8-oxo-dGMP, a Tightly-bound Product 分子名称: 8-OXO-2'-DEOXY-GUANOSINE-5'-MONOPHOSPHATE, MAGNESIUM ION, Mutator mutT protein 著者 Massiah, M.A, Saraswat, V, Azurmendi, H.F, Mildvan, A.S. 登録日 2003-06-25 公開日 2003-08-26 最終更新日 2024-05-22 実験手法 SOLUTION NMR 主引用文献 Solution structure and NH exchange studies of the MutT pyrophosphohydrolase complexed with Mg(2+) and 8-oxo-dGMP, a tightly bound product. Biochemistry, 42, 2003
1NBR	Iron Responsive Element RNA Hairpin, NMR, 15 Structures 分子名称: RNA HAIRPIN 著者 McCallum, S.A, Pardi, A. 登録日 2002-12-03 公開日 2003-03-04 最終更新日 2024-05-22 実験手法 SOLUTION NMR 主引用文献 Refined Solution Structure of the Iron-responsive Element RNA Using Residual Dipolar Couplings J.Mol.Biol., 326, 2003
4DOC	Ternary complex of dna polymerase beta with a dideoxy terminated primer and 2'-deoxyguanosine 5'-beta, gamma-monochlororomethylene triphosphate:binding of S-isomer 分子名称: 5'-O-[(R)-{[(S)-[(S)-chloro(phosphono)methyl](hydroxy)phosphoryl]oxy}(hydroxy)phosphoryl]-2'-deoxyguanosine, C C G A C C G C G C A T C A G C, CHLORIDE ION, ... 著者 Batra, V.K. 登録日 2012-02-09 公開日 2012-06-13 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (1.949 Å) 主引用文献 Beta,gamma-CHF- and beta,gamma-CHCl-dGTP Diastereomers: Synthesis, Discrete (31)P NMR Signatures, and Absolute Configurations of New Stereochemical Probes for DNA Polymerases J.Am.Chem.Soc., 134, 2012
1PUQ	Solution Structure of the MutT Pyrophosphohydrolase Complexed with Mg(2+) and 8-oxo-dGMP, a Tightly-bound Product 分子名称: 8-OXO-2'-DEOXY-GUANOSINE-5'-MONOPHOSPHATE, MAGNESIUM ION, Mutator mutT protein 著者 Massiah, M.A, Saraswat, V, Azurmendi, H.F, Mildvan, A.S. 登録日 2003-06-25 公開日 2003-08-26 最終更新日 2024-05-01 実験手法 SOLUTION NMR 主引用文献 Solution structure and NH exchange studies of the MutT pyrophosphohydrolase complexed with Mg(2+) and 8-oxo-dGMP, a tightly bound product. Biochemistry, 42, 2003
1RJA	Solution Structure and Backbone Dynamics of the Nonreceptor Tyrosine Kinase PTK6/Brk SH2 Domain 分子名称: Tyrosine-protein kinase 6 著者 Hong, E, Shin, J, Lee, W. 登録日 2003-11-18 公開日 2004-07-20 最終更新日 2024-05-01 実験手法 SOLUTION NMR 主引用文献 Solution Structure and Backbone Dynamics of the Non-receptor Protein-tyrosine Kinase-6 Src Homology 2 Domain J.Biol.Chem., 279, 2004
4BKT	von Hippel Lindau protein:ElonginB:ElonginC complex, in complex with (2S,4R)-N-methyl-1-[2-(3-methyl-1,2-oxazol-5-yl)ethanoyl]-4-oxidanyl-pyrrolidine-2-carboxamide 分子名称: (2S,4R)-N-methyl-1-[2-(3-methyl-1,2-oxazol-5-yl)ethanoyl]-4-oxidanyl-pyrrolidine-2-carboxamide, ARGININE, GLUTAMIC ACID, ... 著者 Van Molle, I, Dias, D.M, Baud, M, Galdeano, C, Geraldes, C.F.G.C, Ciulli, A. 登録日 2013-04-29 公開日 2013-11-27 最終更新日 2017-07-12 実験手法 X-RAY DIFFRACTION (2.35 Å) 主引用文献 Is NMR Fragment Screening Fine-Tuned to Assess Druggability of Protein-Protein Interactions? Acs Med.Chem.Lett., 5, 2014
4BKS	von Hippel Lindau protein:ElonginB:ElonginC complex, in complex with (2S,4R)-1-ethanoyl-N-[[4-(1,3-oxazol-5-yl)phenyl]methyl]-4-oxidanyl-pyrrolidine-2-carboxamide 分子名称: (2S,4R)-1-ethanoyl-N-[[4-(1,3-oxazol-5-yl)phenyl]methyl]-4-oxidanyl-pyrrolidine-2-carboxamide, ACETATE ION, TRANSCRIPTION ELONGATION FACTOR B POLYPEPTIDE 1, ... 著者 Van Molle, I, Dias, D.M, Baud, M, Galdeano, C, Geraldes, C.F.G.C, Ciulli, A. 登録日 2013-04-29 公開日 2013-11-27 最終更新日 2014-01-29 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Is NMR Fragment Screening Fine-Tuned to Assess Druggability of Protein-Protein Interactions? Acs Med.Chem.Lett., 5, 2014
1PUS	Solution Structure of the MutT Pyrophosphohydrolase Complexed with Mg(2+) and 8-oxo-dGMP, a Tightly-bound Product 分子名称: 8-OXO-2'-DEOXY-GUANOSINE-5'-MONOPHOSPHATE, MAGNESIUM ION, Mutator mutT protein 著者 Massiah, M.A, Saraswat, V, Azurmendi, H.F, Mildvan, A.S. 登録日 2003-06-25 公開日 2003-08-26 最終更新日 2024-05-01 実験手法 SOLUTION NMR 主引用文献 Solution structure and NH exchange studies of the MutT pyrophosphohydrolase complexed with Mg(2+) and 8-oxo-dGMP, a tightly bound product. Biochemistry, 42, 2003
1QSV	THE VEGF-BINDING DOMAIN OF FLT-1, 20 NMR STRUCTURES 分子名称: VASCULAR ENDOTHELIAL GROWTH FACTOR RECEPTOR 1 著者 Starovasnik, M.A, Christinger, H.W, Wiesmann, C, Champe, M.A, de Vos, A.M, Skelton, N.J. 登録日 1999-06-23 公開日 1999-11-10 最終更新日 2022-03-02 実験手法 SOLUTION NMR 主引用文献 Solution structure of the VEGF-binding domain of Flt-1: comparison of its free and bound states. J.Mol.Biol., 293, 1999
1MYN	SOLUTION STRUCTURE OF DROSOMYCIN, THE FIRST INDUCIBLE ANTIFUNGAL PROTEIN FROM INSECTS, NMR, 15 STRUCTURES 分子名称: DROSOMYCIN 著者 Landon, C, Sodano, P, Hetru, C, Hoffmann, J.A, Ptak, M. 登録日 1996-12-26 公開日 1997-12-31 最終更新日 2022-02-23 実験手法 SOLUTION NMR 主引用文献 Solution structure of drosomycin, the first inducible antifungal protein from insects. Protein Sci., 6, 1997
4DO9	Ternary complex of dna polymerase beta with a dideoxy terminated primer and 2'-deoxyguanosine 5'-beta, gamma-monofluoromethylene triphosphate: stereoselective binding of r-isomer 分子名称: 2'-DEOXY-5'-O-[(R)-{[(R)-[(R)-FLUORO(PHOSPHONO)METHYL](HYDROXY)PHOSPHORYL]OXY}(HYDROXY)PHOSPHORYL]GUANOSINE, C C G A C C G C G C A T C A G C, CHLORIDE ION, ... 著者 Batra, V.K. 登録日 2012-02-09 公開日 2012-06-13 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (2.05 Å) 主引用文献 Beta,gamma-CHF- and beta,gamma-CHCl-dGTP Diastereomers: Synthesis, Discrete (31)P NMR Signatures, and Absolute Configurations of New Stereochemical Probes for DNA Polymerases J.Am.Chem.Soc., 134, 2012
1NP5	(GAC)3 parallel duplex 分子名称: 5'-D(*GP*AP*CP*GP*AP*CP*GP*AP*C)-3' 著者 Zheng, M, Han, X, Gao, X. 登録日 2003-01-17 公開日 2003-02-11 最終更新日 2024-05-22 実験手法 SOLUTION NMR 主引用文献 Strand polarity of trinucleotide repeat sequences: NMR studies of parallel/anti-pararell duplex,{d(GAC)3}2 To be Published
1PPX	Solution Structure of the MutT Pyrophosphohydrolase Complexed with Mg(2+) and 8-oxo-dGMP, a Tightly-bound Product 分子名称: 8-OXO-2'-DEOXY-GUANOSINE-5'-MONOPHOSPHATE, MAGNESIUM ION, Mutator mutT protein 著者 Massiah, M.A, Saraswat, V, Azurmendi, H.F, Mildvan, A.S. 登録日 2003-06-17 公開日 2003-08-26 最終更新日 2024-05-22 実験手法 SOLUTION NMR 主引用文献 Solution structure and NH exchange studies of the MutT pyrophosphohydrolase complexed with Mg(2+) and 8-oxo-dGMP, a tightly bound product. Biochemistry, 42, 2003
6QXZ	Solution structure of the ASHH2 CW domain with the N-terminal histone H3 tail mimicking peptide monomethylated on lysine 4 分子名称: ALA-ARG-THR-MLZ-GLN-THR-ALA-ARG-TYR, Histone-lysine N-methyltransferase ASHH2, ZINC ION 著者 Dobrovolska, O, Madeleine, N, Teigen, K, Halskau, O, Bril'kov, M. 登録日 2019-03-08 公開日 2019-12-04 最終更新日 2023-06-14 実験手法 SOLUTION NMR 主引用文献 The Arabidopsis (ASHH2) CW domain binds monomethylated K4 of the histone H3 tail through conformational selection. Febs J., 287, 2020
7VQH	Solution NMR structure of Escherichia coli Total Lipid Extract Bicelle bound VR18 Antimicrobial Peptide 分子名称: VAL-ALA-ARG-GLY-TRP-GLY-ARG-LYS-CYS-PRO-LEU-PHE-GLY-LYS-ASN-LYS-SER-ARG (VR18) 著者 Mohid, S.A, Bhunia, A. 登録日 2021-10-20 公開日 2022-01-12 最終更新日 2024-05-15 実験手法 SOLUTION NMR 主引用文献 A rationally designed synthetic antimicrobial peptide against Pseudomonas-associated corneal keratitis: Structure-function correlation. Biophys.Chem., 286, 2022
2RQ8	Solution NMR structure of titin I27 domain mutant 分子名称: Titin 著者 Yagawa, K, Oguro, T, Momose, T, Kawano, S, Sato, T, Endo, T. 登録日 2009-03-05 公開日 2010-02-02 最終更新日 2024-05-29 実験手法 SOLUTION NMR 主引用文献 Structural basis for unfolding pathway-dependent stability of proteins: Vectorial unfolding vs. global unfolding Protein Sci., 2010
5TJK	Crystal structure of GTA + A trisaccharide (native) 分子名称: GLYCEROL, Histo-blood group ABO system transferase, alpha-L-fucopyranose-(1-2)-[2-acetamido-2-deoxy-alpha-D-galactopyranose-(1-3)]octyl beta-D-galactopyranoside 著者 Legg, M.S.G, Gagnon, S.M.L, Evans, S.V. 登録日 2016-10-04 公開日 2017-06-14 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (1.45 Å) 主引用文献 High-resolution crystal structures and STD NMR mapping of human ABO(H) blood group glycosyltransferases in complex with trisaccharide reaction products suggest a molecular basis for product release. Glycobiology, 27, 2017
6R9Z	3D NMR solution structure of ligand peptide (Ac)EVNPPVP of Pro-Pro endopeptidase-1 分子名称: ACE-GLU-VAL-ASN-PRO-PRO-VAL-PRO-NH2 著者 Diaz, D. 登録日 2019-04-04 公開日 2019-06-19 最終更新日 2019-08-07 実験手法 SOLUTION NMR 主引用文献 Molecular determinants of the mechanism and substrate specificity ofClostridium difficileproline-proline endopeptidase-1. J.Biol.Chem., 294, 2019
5TJL	Crystal structure of GTA + A trisaccharide (mercury derivative) 分子名称: Histo-blood group ABO system transferase, MERCURY (II) ION, alpha-L-fucopyranose-(1-2)-[2-acetamido-2-deoxy-alpha-D-galactopyranose-(1-3)]octyl beta-D-galactopyranoside 著者 Legg, M.S.G, Gagnon, S.M.L, Evans, S.V. 登録日 2016-10-04 公開日 2017-06-14 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (1.89 Å) 主引用文献 High-resolution crystal structures and STD NMR mapping of human ABO(H) blood group glycosyltransferases in complex with trisaccharide reaction products suggest a molecular basis for product release. Glycobiology, 27, 2017

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