Loading
PDBj
メニューPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

7R2S
DownloadVisualize
BU of 7r2s by Molmil
Crystal structure of a flavodiiron protein D52K mutant from Escherichia coli pressurized with krypton gas
分子名称: Anaerobic nitric oxide reductase flavorubredoxin, FE (III) ION, FLAVIN MONONUCLEOTIDE, ...
著者Borges, P.T, Teixeira, M, Romao, C.V, Frazao, C.
登録日2022-02-05
公開日2023-02-15
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (2.194 Å)
主引用文献Crystal structure of a flavodiiron protein D52K mutant from Escherichia coli pressurized with krypton gas
To Be Published
5D9Y
DownloadVisualize
BU of 5d9y by Molmil
Crystal structure of TET2-5fC complex
分子名称: DNA (5'-D(*AP*CP*TP*GP*TP*(5FC)P*GP*AP*AP*GP*CP*T)-3'), DNA (5'-D(*AP*GP*CP*TP*TP*CP*GP*AP*CP*AP*GP*T)-3'), FE (III) ION, ...
著者Hu, L, Cheng, J, Rao, Q, Li, Z, Li, J, Xu, Y.
登録日2015-08-19
公開日2015-11-04
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.971 Å)
主引用文献Structural insight into substrate preference for TET-mediated oxidation.
Nature, 527, 2015
5D94
DownloadVisualize
BU of 5d94 by Molmil
Crystal structure of LC3-LIR peptide complex
分子名称: Microtubule-associated proteins 1A/1B light chain 3B, Peptide from FYVE and coiled-coil domain-containing protein 1
著者Takagi, K, Mizushima, T, Johansen, T.
登録日2015-08-18
公開日2015-10-21
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.53 Å)
主引用文献FYCO1 Contains a C-terminally Extended, LC3A/B-preferring LC3-interacting Region (LIR) Motif Required for Efficient Maturation of Autophagosomes during Basal Autophagy
J.Biol.Chem., 290, 2015
6T8K
DownloadVisualize
BU of 6t8k by Molmil
Crystal structure of Bacteroides thetaiotamicron EndoBT-3987 in complex with Man9GlcNAc product in P1
分子名称: CALCIUM ION, Endo-beta-N-acetylglucosaminidase F1, alpha-D-mannopyranose-(1-2)-alpha-D-mannopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-2)-alpha-D-mannopyranose-(1-6)]alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
著者Trastoy, B, Du, J.J, Klontz, E.H, Cifuente, J.O, Sundberg, E.J, Guerin, M.E.
登録日2019-10-24
公開日2020-02-26
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structural basis of mammalian high-mannose N-glycan processing by human gut Bacteroides.
Nat Commun, 11, 2020
4W5H
DownloadVisualize
BU of 4w5h by Molmil
New structural conformations of adenylate kinase from Streptococcus pneumoniae D39
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, Adenylate kinase
著者Thach, T.T, Lee, S.H.
登録日2014-08-18
公開日2014-11-26
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.96 Å)
主引用文献New crystal structures of adenylate kinase from Streptococcus pneumoniae D39 in two conformations.
Acta Crystallogr.,Sect.F, 70, 2014
4W5K
DownloadVisualize
BU of 4w5k by Molmil
Structure of a mitochondrial aspartate aminotransferase from Trypanosoma brucei, K237A mutant
分子名称: 1,2-ETHANEDIOL, Aspartate aminotransferase, mitochondrial, ...
著者Seattle Structural Genomics Center for Infectious Disease (SSGCID)
登録日2014-08-18
公開日2014-09-24
最終更新日2024-12-25
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structures of aspartate aminotransferases from Trypanosoma brucei, Leishmania major and Giardia lamblia.
Acta Crystallogr.,Sect.F, 71, 2015
7R5B
DownloadVisualize
BU of 7r5b by Molmil
Crystal structure of BRD4(1) in complex with the inhibitor MPM2
分子名称: (R,R)-2,3-BUTANEDIOL, 1-(3-aminophenyl)-3-methyl-5,6,7,8-tetrahydro-2~{H}-cyclohepta[c]pyrrol-4-one, Bromodomain-containing protein 4, ...
著者Huegle, M.
登録日2022-02-10
公開日2023-02-08
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.77 Å)
主引用文献A novel pan-selective bromodomain inhibitor for epigenetic drug design
Eur.J.Med.Chem., 249, 2023
4W5W
DownloadVisualize
BU of 4w5w by Molmil
Rubisco activase from Arabidopsis thaliana
分子名称: Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic, SULFATE ION
著者Hasse, D, Larsson, A.M, Andersson, I.
登録日2014-08-19
公開日2015-04-08
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Structure of Arabidopsis thaliana Rubisco activase
Acta Crystallogr.,Sect.D, 71, 2015
7R2Y
DownloadVisualize
BU of 7r2y by Molmil
Carbon regulatory PII-like protein SbtB from Synechocystis sp. 6803 in complex with ATP resulting from short ATP soak, conflicting T-loop and C-loop with partial occupancy
分子名称: ADENOSINE-5'-TRIPHOSPHATE, Membrane-associated protein slr1513, SODIUM ION
著者Selim, K.A, Albrecht, R, Hartmann, M.D.
登録日2022-02-06
公開日2023-02-15
最終更新日2024-11-06
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Carbon signaling protein SbtB possesses atypical redox-regulated apyrase activity to facilitate regulation of bicarbonate transporter SbtA.
Proc.Natl.Acad.Sci.USA, 120, 2023
5XLD
DownloadVisualize
BU of 5xld by Molmil
The structure of hemagglutinin Q226L-G228S mutant from an avian-origin H4N6 influenza virus in complex with human receptor analog LSTc
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Hemagglutinin, N-acetyl-alpha-neuraminic acid-(2-6)-beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
著者Song, H, Qi, J, Gao, F.G.
登録日2017-05-10
公開日2017-08-02
最終更新日2024-11-06
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Avian-to-Human Receptor-Binding Adaptation by Influenza A Virus Hemagglutinin H4
Cell Rep, 20, 2017
5DBO
DownloadVisualize
BU of 5dbo by Molmil
Crystal structure of the tetrameric eIF2B-beta2-delta2 complex from C. thermophilum
分子名称: Translation initiation factor eIF2b-like protein,Translation initiation factor eIF2b-like protein, Translation initiation factor eif-2b-like protein
著者Kuhle, B, Ficner, R.
登録日2015-08-21
公開日2015-10-07
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Architecture of the eIF2B regulatory subcomplex and its implications for the regulation of guanine nucleotide exchange on eIF2.
Nucleic Acids Res., 43, 2015
7QZJ
DownloadVisualize
BU of 7qzj by Molmil
1.55 A X-ray crystallographic structure of SapH from Streptomyces sp. (HPH0547) involved in Pseudouridimycin biosynthesis
分子名称: 4'-DEOXY-4'-AMINOPYRIDOXAL-5'-PHOSPHATE, Aspartate aminotransferase family protein, GLYCEROL, ...
著者Schnell, R, Schneider, G.
登録日2022-01-31
公開日2023-02-15
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Pseudouridine-Modifying Enzymes SapB and SapH Control Entry into the Pseudouridimycin Biosynthetic Pathway.
Acs Chem.Biol., 18, 2023
5DBN
DownloadVisualize
BU of 5dbn by Molmil
Crystal structure of AtoDA complex
分子名称: Acetate CoA-transferase subunit alpha, Acetate CoA-transferase subunit beta, CHLORIDE ION, ...
著者Arbing, M.A, Koo, C.W, Shin, A, Medrano-Soto, A, Eisenberg, D.
登録日2015-08-21
公開日2016-08-24
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.549 Å)
主引用文献Crystal structure of AtoDA complex
To Be Published
5DCN
DownloadVisualize
BU of 5dcn by Molmil
Crystal structure of LC3 in complex with TECPR2 LIR
分子名称: Microtubule-associated proteins 1A/1B light chain 3B, SULFATE ION
著者Stadel, D, Huber, J, Dotsch, V, Rogov, V.V, Behrends, C, Akutsu, M.
登録日2015-08-24
公開日2016-03-09
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献TECPR2 Cooperates with LC3C to Regulate COPII-Dependent ER Export.
Mol.Cell, 60, 2015
7R30
DownloadVisualize
BU of 7r30 by Molmil
Carbon regulatory PII-like protein SbtB from Synechocystis sp. 6803 in complex with ADP and AMP resulting from ADP soak
分子名称: ADENOSINE-5'-DIPHOSPHATE, BICARBONATE ION, HEXAETHYLENE GLYCOL, ...
著者Selim, K.A, Albrecht, R, Hartmann, M.D.
登録日2022-02-06
公開日2023-02-15
最終更新日2024-11-06
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Carbon signaling protein SbtB possesses atypical redox-regulated apyrase activity to facilitate regulation of bicarbonate transporter SbtA.
Proc.Natl.Acad.Sci.USA, 120, 2023
5DCX
DownloadVisualize
BU of 5dcx by Molmil
Structural studies of AAV2 Rep68 reveal a partially structured linker and compact domain conformation
分子名称: MAGNESIUM ION, Protein Rep68
著者Musayev, F.N, Zarate-Perez, F.
登録日2015-08-24
公開日2015-09-23
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Structural Studies of AAV2 Rep68 Reveal a Partially Structured Linker and Compact Domain Conformation.
Biochemistry, 54, 2015
5X61
DownloadVisualize
BU of 5x61 by Molmil
Crystal structure of Acetylcholinesterase Catalytic Subunit of the Malaria Vector Anopheles Gambiae, 3.4 A
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-3)-2-acetamido-2-deoxy-beta-D-glucopyranose, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, AMMONIUM ION, ...
著者Han, Q, Robinson, H, Ding, H, Wong, D.M, Lam, P.C.H, Totrov, M.M, Carlier, P.R, Li, J.
登録日2017-02-20
公開日2017-03-15
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (3.4 Å)
主引用文献Crystal structure of acetylcholinesterase catalytic subunits of the malaria vector Anopheles gambiae
Insect Sci., 2017
5DEB
DownloadVisualize
BU of 5deb by Molmil
2009 H1N1 PA endonuclease mutant E119D in complex with rUMP
分子名称: MANGANESE (II) ION, Polymerase acidic protein, URIDINE-5'-MONOPHOSPHATE
著者Kumar, G, White, S.W.
登録日2015-08-25
公開日2016-03-16
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.14 Å)
主引用文献Identification and characterization of influenza variants resistant to a viral endonuclease inhibitor.
Proc.Natl.Acad.Sci.USA, 113, 2016
4W71
DownloadVisualize
BU of 4w71 by Molmil
Crystal structure of a prion peptide
分子名称: PrP peptide
著者Yu, L, Lee, S.-J, Yee, V.
登録日2014-08-21
公開日2015-05-27
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1 Å)
主引用文献Crystal Structures of Polymorphic Prion Protein beta 1 Peptides Reveal Variable Steric Zipper Conformations.
Biochemistry, 54, 2015
5DDB
DownloadVisualize
BU of 5ddb by Molmil
Menin in complex with MI-319
分子名称: 4-{4-[5-(difluoromethyl)-1,3,4-thiadiazol-2-yl]piperazin-1-yl}-6-(2,2,2-trifluoroethyl)thieno[2,3-d]pyrimidine, DI(HYDROXYETHYL)ETHER, DIMETHYL SULFOXIDE, ...
著者Pollock, J, Dmitry, B, Cierpicki, T, Grembecka, J.
登録日2015-08-24
公開日2015-09-09
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.54 Å)
主引用文献Rational Design of Orthogonal Multipolar Interactions with Fluorine in Protein-Ligand Complexes.
J.Med.Chem., 58, 2015
5XN0
DownloadVisualize
BU of 5xn0 by Molmil
HIV-1 reverse transcriptase Q151M:DNA binary complex
分子名称: 38-MER DNA aptamer, GLYCEROL, Pol protein, ...
著者Yasutake, Y, Tamura, N, Hayashi, H, Maeda, K.
登録日2017-05-17
公開日2018-02-07
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.596 Å)
主引用文献HIV-1 with HBV-associated Q151M substitution in RT becomes highly susceptible to entecavir: structural insights into HBV-RT inhibition by entecavir.
Sci Rep, 8, 2018
5DEI
DownloadVisualize
BU of 5dei by Molmil
BENZOYLFORMATE DECARBOXYLASE FROM PSEUDOMONAS PUTIDA
分子名称: BICARBONATE ION, Benzoylformate decarboxylase, CALCIUM ION, ...
著者Bera, A.K, Hasson, M.S.
登録日2015-08-25
公開日2015-09-16
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献BENZOYLFORMATE DECARBOXYLASE FROM PSEUDOMONAS PUTIDA
to be published
4W7P
DownloadVisualize
BU of 4w7p by Molmil
Crystal Structure of ROCK 1 bound to YB-15-QD37
分子名称: N~1~-[2-(1H-indazol-5-yl)pyrido[3,4-d]pyrimidin-4-yl]-2-methylpropane-1,2-diamine, Rho-associated protein kinase 1
著者Sprague, E.R.
登録日2014-08-22
公開日2014-10-15
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Novel ROCK inhibitors for the treatment of pulmonary arterial hypertension.
Bioorg.Med.Chem.Lett., 24, 2014
4W84
DownloadVisualize
BU of 4w84 by Molmil
Crystal structure of XEG5A, a GH5 xyloglucan-specific endo-beta-1,4-glucanase from ruminal metagenomic library, in the native form
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, MAGNESIUM ION, Xyloglucan-specific endo-beta-1,4-glucanase
著者Santos, C.R, Cordeiro, R.L, Wong, D.W.S, Murakami, M.T.
登録日2014-08-22
公開日2015-03-11
最終更新日2024-11-20
実験手法X-RAY DIFFRACTION (1.79 Å)
主引用文献Structural Basis for Xyloglucan Specificity and alpha-d-Xylp(1 6)-d-Glcp Recognition at the -1 Subsite within the GH5 Family.
Biochemistry, 54, 2015
7QXF
DownloadVisualize
BU of 7qxf by Molmil
Fructose-6-phosphate aldolase (FSA) mutant R134V, S166G, with covalently bound active site ligand
分子名称: Fructose-6-phosphate aldolase 1
著者Dobritzsch, D, Widersten, M, Engel, S.
登録日2022-01-26
公開日2023-02-08
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (2.62 Å)
主引用文献Engineered aldolases catalyzing stereoselective aldol reactions between aryl-substituted ketones and aldehydes
Catalysis Science And Technology, 13, 2023

238582

件を2025-07-09に公開中

PDB statisticsPDBj update infoContact PDBjnumon