PDB: 98225 件ウェブページステータス検索Chemie searchBIRD

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7JR9	Chlamydomonas reinhardtii radial spoke minimal head complex 分子名称: Flagellar radial spoke protein 10, Flagellar radial spoke protein 4, Flagellar radial spoke protein 6, ... 著者 Grossman-Haham, I, Coudray, N, Yu, Z, Wang, F, Bhabha, G, Vale, R.D. 登録日 2020-08-11 公開日 2020-12-16 最終更新日 2021-01-27 実験手法 ELECTRON MICROSCOPY (2.95 Å) 主引用文献 Structure of the radial spoke head and insights into its role in mechanoregulation of ciliary beating. Nat.Struct.Mol.Biol., 28, 2021
5T16	Crystal structure of yeast RNase III (Rnt1p) complexed with a non-hydrolyzable RNA substrate analog 分子名称: 1,2-ETHANEDIOL, RNA substrate analog, Ribonuclease 3 著者 Song, H, Ji, X. 登録日 2016-08-18 公開日 2017-02-08 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (2.783 Å) 主引用文献 The Functional Cycle of Rnt1p: Five Consecutive Steps of Double-Stranded RNA Processing by a Eukaryotic RNase III. Structure, 25, 2017
1GQE	Polypeptide Chain Release Factor 2 (RF2) from Escherichia coli 分子名称: RELEASE FACTOR 2 著者 Vestergaard, B, Kjeldgaard, M. 登録日 2001-11-22 公開日 2002-04-04 最終更新日 2024-10-16 実験手法 X-RAY DIFFRACTION (1.81 Å) 主引用文献 Bacterial Polypeptide Release Factor Rf2 is Structurally Distinct from Eukaryotic Erf1. Mol.Cell, 8, 2001
7USF	Mouse mammary tumor virus strand transfer complex intasome 分子名称: CALCIUM ION, Integrase, ZINC ION, ... 著者 Jozwik, I, Lyumkis, D. 登録日 2022-04-25 公開日 2022-08-24 最終更新日 2024-06-12 実験手法 ELECTRON MICROSCOPY (3.5 Å) 主引用文献 B-to-A transition in target DNA during retroviral integration. Nucleic Acids Res., 50, 2022
8SP3	Asymmetric dimer of MapSPARTA bound with gRNA/tDNA hybrid 分子名称: MAGNESIUM ION, TIR-APAZ, guide RNA, ... 著者 Shen, Z.F, Yang, X.Y, Fu, T.M. 登録日 2023-05-01 公開日 2023-08-23 最終更新日 2023-09-20 実験手法 ELECTRON MICROSCOPY (3.52 Å) 主引用文献 Oligomerization-mediated activation of a short prokaryotic Argonaute. Nature, 621, 2023
6J8I	Structure of human voltage-gated sodium channel Nav1.7 in complex with auxiliary beta subunits, ProTx-II and tetrodotoxin (Y1755 up) 分子名称: (1R,5R,6R,7R,9S,11S,12S,13S,14S)-3-amino-14-(hydroxymethyl)-8,10-dioxa-2,4-diazatetracyclo[7.3.1.1~7,11~.0~1,6~]tetradec-3-ene-5,9,12,13,14-pentol (non-preferred name), 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ... 著者 Shen, H, Liu, D, Lei, J, Yan, N. 登録日 2019-01-19 公開日 2019-02-27 最終更新日 2024-10-16 実験手法 ELECTRON MICROSCOPY (3.2 Å) 主引用文献 Structures of human Nav1.7 channel in complex with auxiliary subunits and animal toxins. Science, 363, 2019
6HJD	Cholera toxin classical B-pentamer in complex with Lewis-x 分子名称: BICINE, CALCIUM ION, Cholera toxin B subunit, ... 著者 Krengel, U, Heim, J.B. 登録日 2018-09-03 公開日 2019-08-14 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (1.54 Å) 主引用文献 Crystal structures of cholera toxin in complex with fucosylated receptors point to importance of secondary binding site. Sci Rep, 9, 2019
1NSG	THE STRUCTURE OF THE IMMUNOPHILIN-IMMUNOSUPPRESSANT FKBP12-RAPAMYCIN COMPLEX INTERACTING WITH HUMAN FRAP 分子名称: C49-METHYL RAPAMYCIN, FK506-BINDING PROTEIN, FKBP-RAPAMYCIN ASSOCIATED PROTEIN (FRAP) 著者 Liang, J, Choi, J, Clardy, J. 登録日 1997-07-01 公開日 1998-03-18 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Refined structure of the FKBP12-rapamycin-FRB ternary complex at 2.2 A resolution. Acta Crystallogr.,Sect.D, 55, 1999
4HH2	Structure of PpsR without the HTH motif from Rb. sphaeroides 分子名称: Transcriptional regulator, PpsR 著者 Winkler, A, Heintz, U, Lindner, R, Reinstein, J, Shoeman, R, Schlichting, I. 登録日 2012-10-09 公開日 2013-06-05 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 A ternary AppA-PpsR-DNA complex mediates light regulation of photosynthesis-related gene expression. Nat.Struct.Mol.Biol., 20, 2013
4HH0	Dark-state structure of AppA C20S without the Cys-rich region from Rb. sphaeroides 分子名称: AppA protein, CHLORIDE ION, FLAVIN MONONUCLEOTIDE 著者 Winkler, A, Heintz, U, Lindner, R, Reinstein, J, Shoeman, R, Schlichting, I. 登録日 2012-10-09 公開日 2013-06-05 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (2.6 Å) 主引用文献 A ternary AppA-PpsR-DNA complex mediates light regulation of photosynthesis-related gene expression. Nat.Struct.Mol.Biol., 20, 2013
8UKE	Crystal Structure of Norbelladine O-methyltransferase variant in complex with SAH 分子名称: CALCIUM ION, Norbelladine 4'-O-methyltransferase, S-ADENOSYL-L-HOMOCYSTEINE 著者 Kim, W, Zhang, Y.J. 登録日 2023-10-12 公開日 2024-03-20 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 Biosensor and machine learning-aided engineering of an amaryllidaceae enzyme. Nat Commun, 15, 2024
5X4J	The crystal structure of Pyrococcus furiosus RecJ (Zn-soaking) 分子名称: CHLORIDE ION, Uncharacterized protein, ZINC ION 著者 Li, M.J, Yi, G.S, Yu, F, Zhou, H, Chen, J.N, Xu, C.Y, Wang, F.P, Xiao, X, He, J.H, Liu, X.P. 登録日 2017-02-13 公開日 2018-02-14 最終更新日 2019-12-18 実験手法 X-RAY DIFFRACTION (2.04 Å) 主引用文献 The crystal structure of Pyrococcus furiosus RecJ implicates it as an ancestor of eukaryotic Cdc45. Nucleic Acids Res., 45, 2017
5X4K	The complex crystal structure of Pyrococcus furiosus RecJ and CMP 分子名称: CYTIDINE-5'-MONOPHOSPHATE, Uncharacterized protein, ZINC ION 著者 Li, M.J, Yi, G.S, Yu, F, Zhou, H, Chen, J.N, Xu, C.Y, Wang, F.P, Xiao, X, He, J.H, Liu, X.P. 登録日 2017-02-13 公開日 2018-02-14 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (1.749 Å) 主引用文献 The crystal structure of Pyrococcus furiosus RecJ implicates it as an ancestor of eukaryotic Cdc45. Nucleic Acids Res., 45, 2017
5NFA	Structure of Galectin-3 CRD in complex with compound 3 分子名称: 3-O-[(3-methoxyphenyl)methyl]-beta-D-galactopyranose-(1-4)-N-acetyl-2-(acetylamino)-2-deoxy-beta-D-glucopyranosylamine, Galectin-3 著者 Ronin, C, Atmanene, C, Gautier, F.M, Djedaini Pilard, F, Teletchea, S, Ciesielski, F, Vivat Hannah, V, Grandjean, C. 登録日 2017-03-13 公開日 2017-06-21 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (1.59 Å) 主引用文献 Biophysical and structural characterization of mono/di-arylated lactosamine derivatives interaction with human galectin-3. Biochem. Biophys. Res. Commun., 489, 2017
6HMY	Cholera toxin classical B-pentamer in complex with fucosyl-GM1 分子名称: BICINE, CALCIUM ION, Cholera enterotoxin B-subunit, ... 著者 Krengel, U, Heim, J.B. 登録日 2018-09-13 公開日 2019-08-14 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 Crystal structures of cholera toxin in complex with fucosylated receptors point to importance of secondary binding site. Sci Rep, 9, 2019
5VWU	Crystal structure of oxidized Aspergillus fumigatus UDP-galactopyranose mutase complexed with NADH 分子名称: 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, FLAVIN-ADENINE DINUCLEOTIDE, SULFATE ION, ... 著者 Tanner, J.J. 登録日 2017-05-22 公開日 2017-05-31 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (2.75 Å) 主引用文献 Identification of the NAD(P)H binding site of eukaryotic UDP-galactopyranose mutase. J. Am. Chem. Soc., 134, 2012
6DH5	Crystal structure of HIV-1 Protease NL4-3 V82I Mutant in complex with UMass6 分子名称: (3R,3aS,6aR)-hexahydrofuro[2,3-b]furan-3-yl [(1S,2R)-3-{[(4-aminophenyl)sulfonyl](2-ethylbutyl)amino}-1-benzyl-2-hydroxypropyl]carbamate, Protease, SULFATE ION 著者 Lockbaum, G.J, Schiffer, C.A. 登録日 2018-05-18 公開日 2018-12-26 最終更新日 2023-10-11 実験手法 X-RAY DIFFRACTION (2.008 Å) 主引用文献 Structural Adaptation of Darunavir Analogues against Primary Mutations in HIV-1 Protease. ACS Infect Dis, 5, 2019
7Z4C	SpCas9 bound to 6 nucleotide complementary DNA substrate 分子名称: CRISPR-associated endonuclease Cas9/Csn1, Non-target strand of 6 nucleotide complementary DNA substrate, Target strand of 6 nucleotide complementary DNA substrate, ... 著者 Pacesa, M, Jinek, M. 登録日 2022-03-03 公開日 2022-08-31 最終更新日 2024-07-17 実験手法 ELECTRON MICROSCOPY (3.87 Å) 主引用文献 R-loop formation and conformational activation mechanisms of Cas9. Nature, 609, 2022
7Z4H	SpCas9 bound to 14-nucleotide complementary DNA substrate 分子名称: CRISPR-associated endonuclease Cas9/Csn1, Non-target strand of 14-nucleotide complementary DNA substrate, Target strand of 14-nucleotide complementary DNA substrate, ... 著者 Pacesa, M, Jinek, M. 登録日 2022-03-03 公開日 2022-08-31 最終更新日 2024-07-17 実験手法 ELECTRON MICROSCOPY (3.49 Å) 主引用文献 R-loop formation and conformational activation mechanisms of Cas9. Nature, 609, 2022
7Z4G	SpCas9 bound to 12-nucleotide complementary DNA substrate 分子名称: CRISPR-associated endonuclease Cas9/Csn1, Non-target strand of 12-nucleotide complementary DNA substrate, Target strand of 12-nucleotide complementary DNA substrate, ... 著者 Pacesa, M, Jinek, M. 登録日 2022-03-03 公開日 2022-08-31 最終更新日 2024-07-17 実験手法 ELECTRON MICROSCOPY (3.64 Å) 主引用文献 R-loop formation and conformational activation mechanisms of Cas9. Nature, 609, 2022
7Z4K	SpCas9 bound to 10-nucleotide complementary DNA substrate 分子名称: CRISPR-associated endonuclease Cas9/Csn1, Non-target strand of 10-nucleotide complementary DNA substrate, Target strand of 10-nucleotide complementary DNA substrate, ... 著者 Pacesa, M, Jinek, M. 登録日 2022-03-04 公開日 2022-08-31 最終更新日 2024-07-17 実験手法 ELECTRON MICROSCOPY (3.81 Å) 主引用文献 R-loop formation and conformational activation mechanisms of Cas9. Nature, 609, 2022
2WW4	a triclinic crystal form of E. coli 4-diphosphocytidyl-2C-methyl-D- erythritol kinase 分子名称: 4-DIPHOSPHOCYTIDYL-2C-METHYL-D-ERYTHRITOL KINASE, ADENOSINE-5'-DIPHOSPHATE, GLYCEROL 著者 Kalinowska-Tluscik, J, Miallau, L, Gabrielsen, M, Leonard, G.A, McSweeney, S.M, Hunter, W.N. 登録日 2009-10-21 公開日 2010-03-09 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 A Triclinic Crystal Form of Escherichia Coli 4-Diphosphocytidyl-2C-Methyl-D-Erythritol Kinase and Reassessment of the Quaternary Structure. Acta Crystallogr.,Sect.F, 66, 2010
5X4I	Pyrococcus furiosus RecJ (D83A, Mn-soaking) 分子名称: CHLORIDE ION, MANGANESE (II) ION, Uncharacterized protein 著者 Li, M.J, Yi, G.S, Yu, F, Zhou, H, Chen, J.N, Xu, C.Y, Wang, F.P, Xiao, X, He, J.H, Liu, X.P. 登録日 2017-02-13 公開日 2018-02-14 最終更新日 2024-10-09 実験手法 X-RAY DIFFRACTION (2.092 Å) 主引用文献 The crystal structure of Pyrococcus furiosus RecJ implicates it as an ancestor of eukaryotic Cdc45. Nucleic Acids Res., 45, 2017
4FVT	Human SIRT3 bound to Ac-ACS peptide and Carba-NAD 分子名称: Acetylated ACS2 peptide, CARBA-NICOTINAMIDE-ADENINE-DINUCLEOTIDE, GLYCEROL, ... 著者 Dai, H. 登録日 2012-06-29 公開日 2012-08-15 最終更新日 2012-09-19 実験手法 X-RAY DIFFRACTION (2.47 Å) 主引用文献 Synthesis of Carba-NAD and the Structures of Its Ternary Complexes with SIRT3 and SIRT5. J.Org.Chem., 77, 2012
7OEO	C-TERMINAL BROMODOMAIN OF HUMAN BRD4 N-(2,2-diphenylethyl)-4-methoxy-3,5-dimethyl-N-(2-(methylamino)-2-oxoethyl)benzamide 分子名称: Bromodomain-containing protein 4, N-(2,2-diphenylethyl)-4-methoxy-3,5-dimethyl-N-[2-(methylamino)-2-oxidanylidene-ethyl]benzamide 著者 Chung, C. 登録日 2021-05-03 公開日 2021-07-21 最終更新日 2024-05-01 実験手法 X-RAY DIFFRACTION (1.51 Å) 主引用文献 Discovery of a Highly Selective BET BD2 Inhibitor from a DNA-Encoded Library Technology Screening Hit. J.Med.Chem., 64, 2021

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