PDB: 238582 件ウェブページステータス検索Chemie searchBIRD

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3DBL	Structural Dissection of a Gating Mechanism Preventing Misactivation of Ubiquitin by NEDD8's E1 (APPBP1-UBA3Arg190wt-NEDD8Ala72Gln) 分子名称: NEDD8, NEDD8-activating enzyme E1 catalytic subunit, NEDD8-activating enzyme E1 regulatory subunit, ... 著者 Souphron, J, Schulman, B.A. 登録日 2008-06-01 公開日 2008-08-12 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (2.9 Å) 主引用文献 Structural dissection of a gating mechanism preventing misactivation of ubiquitin by NEDD8's E1. Biochemistry, 47, 2008
3DED	C-terminal domain of Probable hemolysin from Chromobacterium violaceum 分子名称: CALCIUM ION, Probable hemolysin 著者 Chang, C, Xu, X, Cui, H, Savchenko, A, Edwards, A, Joachimiak, A, Midwest Center for Structural Genomics (MCSG) 登録日 2008-06-09 公開日 2008-08-05 最終更新日 2024-11-06 実験手法 X-RAY DIFFRACTION (2.14 Å) 主引用文献 Crystal structure of C-terminal domain of Probable hemolysin from Chromobacterium violaceum To be Published
3DEY	Crystal structure of 17beta-HSD1 with DHT in normal and reverse orientation. 分子名称: 5-ALPHA-DIHYDROTESTOSTERONE, Estradiol 17-beta-dehydrogenase 1, GLYCEROL 著者 Mazumdar, M. 登録日 2008-06-10 公開日 2009-09-29 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 17beta-HSD1 stimulates breast cancer by DHT inactivation in addition to estradiol production. To be Published
3DF9	Crystal structure of E. coli MTA/SAH nucleosidase in complex with BnT-DADMeImmA 分子名称: (3R,4S)-1-[(4-amino-5H-pyrrolo[3,2-d]pyrimidin-7-yl)methyl]-4-[(benzylsulfanyl)methyl]pyrrolidin-3-ol, MTA/SAH nucleosidase 著者 Siu, K.K.W, Howell, P.L. 登録日 2008-06-11 公開日 2009-03-17 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (1.95 Å) 主引用文献 Structure of Staphylococcus aureus 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase Acta Crystallogr.,Sect.F, 64, 2008
9NGE	The ubiquitin-associated domain of human thirty-eight negative kinase-1 rigidly fused to a double trigger variant of the 1TEL crystallization chaperone 分子名称: DI(HYDROXYETHYL)ETHER, POTASSIUM ION, SODIUM ION, ... 著者 Averett, J.C, Bradford, M.J, Averett, B.J, Hansen, D, Doukov, T, Moody, J.D. 登録日 2025-02-22 公開日 2025-03-26 実験手法 X-RAY DIFFRACTION (2.02 Å) 主引用文献 The ubiquitin-associated domain of human thirty-eight negative kinase-1 rigidly fused to a double trigger variant of the 1TEL crystallization chaperone To Be Published
5JVY	Crystal structure of S121P murine COX-2 mutant 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ACRYLIC ACID, ... 著者 Orlando, B.J, Malkowski, M.G, Dong, L. 登録日 2016-05-11 公開日 2016-10-26 最終更新日 2024-11-13 実験手法 X-RAY DIFFRACTION (2.36 Å) 主引用文献 Fatty Acid Binding to the Allosteric Subunit of Cyclooxygenase-2 Relieves a Tonic Inhibition of the Catalytic Subunit. J.Biol.Chem., 291, 2016
3DG7	Crystal structure of muconate lactonizing enzyme from Mucobacterium Smegmatis complexed with muconolactone 分子名称: MAGNESIUM ION, Muconate cycloisomerase, [(2S)-5-oxo-2,5-dihydrofuran-2-yl]acetic acid 著者 Fedorov, A.A, Fedorov, E.V, Sakai, A, Gerlt, J.A, Almo, S.C. 登録日 2008-06-12 公開日 2009-03-03 最終更新日 2024-03-20 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Evolution of enzymatic activities in the enolase superfamily: stereochemically distinct mechanisms in two families of cis,cis-muconate lactonizing enzymes Biochemistry, 48, 2009
3DJ3	Crystal Structure of C-terminal Truncated TIP-1 (6-113) 分子名称: Tax1-binding protein 3 著者 Shen, Y. 登録日 2008-06-21 公開日 2008-10-21 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 Structural Basis of beta-Catenin Recognition by Tax-interacting Protein-1 J.Mol.Biol., 384, 2008
1L0G	X-ray Crystal Structure of AmpC S64G Mutant beta-Lactamase 分子名称: PHOSPHATE ION, beta-D-fructofuranose-(2-1)-alpha-D-glucopyranose, beta-lactamase 著者 Beadle, B.M, Shoichet, B.K. 登録日 2002-02-09 公開日 2002-08-14 最終更新日 2023-08-16 実験手法 X-RAY DIFFRACTION (1.5 Å) 主引用文献 Structural bases of stability-function tradeoffs in enzymes. J.Mol.Biol., 321, 2002
3DJO	Bovine Seminal Ribonuclease uridine 2' phosphate complex 分子名称: ACETATE ION, PHOSPHORIC ACID MONO-[2-(2,4-DIOXO-3,4-DIHYDRO-2H-PYRIMIDIN-1-YL)-4-HYDROXY-5-HYDROXYMETHYL-TETRAHYDRO-FURAN-3-YL] ESTER, Seminal ribonuclease 著者 Dossi, K, Leonidas, D.D, Zographos, S.E, Oikonomakos, N.G. 登録日 2008-06-24 公開日 2009-06-30 最終更新日 2024-11-13 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 Mapping the ribonucleolytic active site of bovine seminal ribonuclease. The binding of pyrimidinyl phosphonucleotide inhibitors Eur.J.Med.Chem., 44, 2009
3DJS	Crystal structure of transthyretin variant L58H at acidic pH 分子名称: Transthyretin 著者 Cendron, L, Zanotti, G, Folli, C, Berni, R. 登録日 2008-06-24 公開日 2009-07-14 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Amyloidogenic potential of transthyretin variants: insights from structural and computational analyses. J.Biol.Chem., 284, 2009
9MYL	Fertilization IZUMO1 Protein Ectodomain in Complex with Anti-sperm Antibody OBF13 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Anti-sperm antibody OBF13 heavy chain, Anti-sperm antibody OBF13 light chain, ... 著者 Tang, S. 登録日 2025-01-22 公開日 2025-03-19 実験手法 X-RAY DIFFRACTION (3.177 Å) 主引用文献 Allosteric inhibition of the IZUMO1-JUNO fertilization complex by the naturally occurring antisperm antibody OBF13. Proc.Natl.Acad.Sci.USA, 122, 2025
3DJZ	Crystal structure of transthyretin variant L55P at neutral pH 分子名称: Transthyretin 著者 Cendron, L, Zanotti, G, Folli, C, Berni, R. 登録日 2008-06-24 公開日 2009-07-14 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (1.82 Å) 主引用文献 Amyloidogenic potential of transthyretin variants: insights from structural and computational analyses. J.Biol.Chem., 284, 2009
3DKU	Crystal structure of Nudix hydrolase Orf153, ymfB, from Escherichia coli K-1 分子名称: Putative phosphohydrolase 著者 Hong, M.K, Kim, J.K, Jung, J.H, Jung, J.W, Choi, J.Y, Kang, L.W. 登録日 2008-06-26 公開日 2009-06-30 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (2.69 Å) 主引用文献 Crystal structure of Nudix hydrolase Orf153, ymfB, from Escherichia coli K-1. To be Published
9N4Z	CCW Flagellar Switch Complex - FliF, FliG, FliM, and FliN forming 34-mer C-ring from Salmonella 分子名称: Flagellar M-ring protein, Flagellar motor switch protein FliG, Flagellar motor switch protein FliM, ... 著者 Singh, P.K, Iverson, T.M. 登録日 2025-02-03 公開日 2025-03-19 最終更新日 2025-04-02 実験手法 ELECTRON MICROSCOPY (3 Å) 主引用文献 Improving CryoEM maps of symmetry-mismatched macromolecular assemblies: A case study on the flagellar motor. J.Struct.Biol., 217, 2025
3DLJ	Crystal structure of human carnosine dipeptidase 1 分子名称: Beta-Ala-His dipeptidase, SULFATE ION, UNKNOWN ATOM OR ION, ... 著者 Dong, A, Dobrovetsky, E, Seitova, A, He, H, Tempel, W, Kozieradzki, I, Arrowsmith, C.H, Weigelt, J, Bountra, C, Edwards, A.M, Bochkarev, A, Cossar, D, Structural Genomics Consortium (SGC) 登録日 2008-06-27 公開日 2008-08-19 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (2.26 Å) 主引用文献 Crystal structure of human carnosine dipeptidase 1. To be Published
3DLX	Crystal structure of human 3-oxoacid CoA transferase 1 分子名称: GLYCEROL, Succinyl-CoA:3-ketoacid-coenzyme A transferase 1 著者 Kavanagh, K.L, Shafqat, N, Yue, W.W, Picaud, S, Murray, J.W, Maclean, E.M, von Delft, F, Roos, A.K, Arrowsmith, C.H, Wikstrom, M, Edwards, A.M, Bountra, C, Oppermann, U, Structural Genomics Consortium (SGC) 登録日 2008-06-30 公開日 2008-08-12 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Crystal structure of human 3-oxoacid CoA transferase 1. To be Published
3DMW	Crystal structure of human type III collagen G982-G1023 containing C-terminal cystine knot 分子名称: Collagen alpha-1(III) chain 著者 Boudko, S.P, Engel, J, Okuyama, K, Mizuno, K, Bachinger, H.P, Schumacher, M.A. 登録日 2008-07-01 公開日 2008-09-30 最終更新日 2021-10-20 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Crystal structure of human type III collagen Gly991-Gly1032 cystine knot-containing peptide shows both 7/2 and 10/3 triple helical symmetries. J.Biol.Chem., 283, 2008
3DN1	Chloropentafluorobenzene binding in the hydrophobic cavity of T4 lysozyme L99A mutant 分子名称: 1-chloro-2,3,4,5,6-pentafluorobenzene, 2-HYDROXYETHYL DISULFIDE, CHLORIDE ION, ... 著者 Liu, L, Matthews, B.W. 登録日 2008-07-01 公開日 2008-11-11 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Halogenated benzenes bound within a non-polar cavity in T4 lysozyme provide examples of I...S and I...Se halogen-bonding. J.Mol.Biol., 385, 2009
3DNB	HELIX GEOMETRY, HYDRATION, AND G.A MISMATCH IN A B-DNA DECAMER 分子名称: DNA (5'-D(*CP*CP*AP*AP*GP*AP*TP*TP*GP*G)-3'), MAGNESIUM ION 著者 Prive, G.G, Dickerson, R.E. 登録日 1988-03-18 公開日 1989-01-09 最終更新日 2024-05-22 実験手法 X-RAY DIFFRACTION (1.3 Å) 主引用文献 Structure of the B-DNA decamer C-C-A-A-C-G-T-T-G-G and comparison with isomorphous decamers C-C-A-A-G-A-T-T-G-G and C-C-A-G-G-C-C-T-G-G. J.Mol.Biol., 217, 1991
3DNG	Crystal structure of the complex between MMP-8 and a non-zinc chelating inhibitor 分子名称: (5S)-5-(2-amino-2-oxoethyl)-4-oxo-N-[(3-oxo-3,4-dihydro-2H-1,4-benzoxazin-6-yl)methyl]-3,4,5,6,7,8-hexahydro[1]benzothieno[2,3-d]pyrimidine-2-carboxamide, CALCIUM ION, Neutrophil collagenase, ... 著者 Pochetti, G, Montanari, R, Mazza, F. 登録日 2008-07-02 公開日 2009-03-03 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Extra Binding Region Induced by Non-Zinc Chelating Inhibitors into the S(1)' Subsite of Matrix Metalloproteinase 8 (MMP-8) J.Med.Chem., 52, 2009
3DNU	structure of MDT protein 分子名称: CHLORIDE ION, PHOSPHATE ION, Protein hipA 著者 schumacher, M.A. 登録日 2008-07-02 公開日 2009-01-27 最終更新日 2024-11-13 実験手法 X-RAY DIFFRACTION (1.54 Å) 主引用文献 Molecular mechanisms of HipA-mediated multidrug tolerance and its neutralization by HipB. Science, 323, 2009
3D8L	Crystal structure of ORF12 from the lactococcus lactis bacteriophage p2 分子名称: ORF12 著者 Siponen, M.I, Spinelli, S, Lichiere, J, Moineau, S, Cambillau, C, Campanacci, V. 登録日 2008-05-23 公開日 2009-04-14 最終更新日 2024-03-20 実験手法 X-RAY DIFFRACTION (2.9 Å) 主引用文献 Crystal structure of ORF12 from Lactococcus lactis phage p2 identifies a tape measure protein chaperone J.Bacteriol., 191, 2009
3D8X	Crystal Structure of Saccharomyces cerevisiae NDPPH Dependent Thioredoxin Reductase 1 分子名称: FLAVIN-ADENINE DINUCLEOTIDE, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, Thioredoxin reductase 1 著者 Zhang, Z.Y, Bao, R, Yu, J, Chen, Y.X, Zhou, C.-Z. 登録日 2008-05-26 公開日 2008-12-09 最終更新日 2024-10-16 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 Crystal structure of Saccharomyces cerevisiae cytoplasmic thioredoxin reductase Trr1 reveals the structural basis for species-specific recognition of thioredoxin Biochim.Biophys.Acta, 1794, 2009
3D9F	Nitroalkane oxidase: active site mutant S276A crystallized with 1-nitrohexane 分子名称: 1-nitrohexane, FLAVIN-ADENINE DINUCLEOTIDE, GLYCEROL, ... 著者 Heroux, A, Bozinovski, D.M, Valley, M.P, Fitzpatrick, P.F, Orville, A.M. 登録日 2008-05-27 公開日 2009-04-07 最終更新日 2024-05-29 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Crystal structures of intermediates in the nitroalkane oxidase reaction. Biochemistry, 48, 2009

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