PDB: 41454 件ウェブページステータス検索Chemie searchBIRD

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7O3B	Crystal structure of the TTBK2-CEP164 complex bound to a camelid nanobody 分子名称: Nanobody 36Z, Tau-tubulin kinase 2,Centrosomal protein of 164 kDa 著者 e Silva, I.R, van Breugel, M. 登録日 2021-04-01 公開日 2021-09-15 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 Molecular mechanisms underlying the role of the centriolar CEP164-TTBK2 complex in ciliopathies. Structure, 30, 2022
6WVB	Takifugu rubripes VKOR-like with warfarin 分子名称: S-WARFARIN, Vitamin K epoxide reductase-like protein, termini restrained by green fluorescent protein 著者 Liu, S, Sukumar, N, Li, W. 登録日 2020-05-05 公開日 2020-11-11 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (2.872 Å) 主引用文献 Structural basis of antagonizing the vitamin K catalytic cycle for anticoagulation. Science, 371, 2021
5FT6	Crystal structure of the cysteine desulfurase CsdA (S-sulfonic acid) from Escherichia coli at 2.050 Angstroem resolution 分子名称: CYSTEINE DESULFURASE CSDA, DI(HYDROXYETHYL)ETHER, GLYCEROL, ... 著者 Fernandez, F.J, Arda, A, Lopez-Estepa, M, Aranda, J, Penya-Soler, E, Garces, F, Round, A, Campos-Oliva, R, Bruix, M, Coll, M, Tunon, I, Jimenez-Barbero, J, Vega, M.C. 登録日 2016-01-11 公開日 2016-11-23 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (2.049 Å) 主引用文献 Mechanism of Sulfur Transfer Across Protein-Protein Interfaces: The Cysteine Desulfurase Model System Acs Catalysis, 6, 2016
7O0S	Crystal structure of the N-terminal domain of CEP164(1-109) bound to camelid nanobody 36Z 分子名称: Centrosomal protein of 164 kDa, Nanobody 36Z 著者 e Silva, I.R, van Breugel, M. 登録日 2021-03-26 公開日 2021-09-15 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 Molecular mechanisms underlying the role of the centriolar CEP164-TTBK2 complex in ciliopathies. Structure, 30, 2022
6R8N	STRUCTURE DETERMINATION OF THE TETRAHEDRAL AMINOPEPTIDASE TET2 FROM P. HORIKOSHII BY USE OF COMBINED SOLID-STATE NMR, SOLUTION-STATE NMR AND EM DATA 4.1 A, FOLLOWED BY REAL_SPACE_REFINEMENT AT 4.1 A 分子名称: Tetrahedral aminopeptidase, ZINC ION 著者 Colletier, J.-P, Gauto, D, Estrozi, L, Favier, A, Effantin, G, Schoehn, G, Boisbouvier, J, Schanda, P. 登録日 2019-04-02 公開日 2019-08-14 最終更新日 2023-09-13 実験手法 ELECTRON MICROSCOPY (4.1 Å), SOLUTION NMR 主引用文献 Integrated NMR and cryo-EM atomic-resolution structure determination of a half-megadalton enzyme complex. Nat Commun, 10, 2019
7MEP	BG505 SOSIP.v5.2(7S) in complex with the monoclonal antibodies Rh.33172 mAb.1 and RM19R 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, BG505 SOSIPv5.2(7S) - gp120, ... 著者 Antanasijevic, A, Ward, A.B. 登録日 2021-04-07 公開日 2022-01-26 最終更新日 2022-08-10 実験手法 ELECTRON MICROSCOPY (3.5 Å) 主引用文献 From structure to sequence: Antibody discovery using cryoEM. Sci Adv, 8, 2022
7MDU	BG505 SOSIP MD39 in complex with the monoclonal antibodies Rh.33104 mAb.1 and RM20A3 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, RM20A3 mAb Heavy Chain, ... 著者 Antanasijevic, A, Ward, A.B. 登録日 2021-04-06 公開日 2022-01-26 最終更新日 2022-02-02 実験手法 ELECTRON MICROSCOPY (3.3 Å) 主引用文献 From structure to sequence: Antibody discovery using cryoEM. Sci Adv, 8, 2022
7MDT	BG505 SOSIP.v5.2 in complex with the monoclonal antibody Rh4O9.8 (as Fab fragment) 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Rh4O9.8 monoclonal antibody Heavy Chain, ... 著者 Antanasijevic, A, Ozorowski, G, Nogal, B, Ward, A.B. 登録日 2021-04-06 公開日 2022-01-26 最終更新日 2022-02-02 実験手法 ELECTRON MICROSCOPY (3.6 Å) 主引用文献 From structure to sequence: Antibody discovery using cryoEM. Sci Adv, 8, 2022
5DX9	Structure of trehalose-6-phosphate phosphatase from Cryptococcus neoformans 分子名称: 6-O-phosphono-alpha-D-glucopyranose-(1-1)-alpha-D-glucopyranose, BETA-MERCAPTOETHANOL, MAGNESIUM ION, ... 著者 Miao, Y, Brennan, R.G. 登録日 2015-09-23 公開日 2016-06-15 最終更新日 2020-07-29 実験手法 X-RAY DIFFRACTION (2.15 Å) 主引用文献 Structures of trehalose-6-phosphate phosphatase from pathogenic fungi reveal the mechanisms of substrate recognition and catalysis. Proc.Natl.Acad.Sci.USA, 113, 2016
5DXO	Structure of Aspergillus fumigatus trehalose-6-phosphate phosphatase crystal form 3 分子名称: MAGNESIUM ION, trehalose-6-phosphate phosphatase 著者 Miao, Y, Brennan, R.G. 登録日 2015-09-23 公開日 2016-06-15 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Structures of trehalose-6-phosphate phosphatase from pathogenic fungi reveal the mechanisms of substrate recognition and catalysis. Proc.Natl.Acad.Sci.USA, 113, 2016
6W1H	Crystal structure of the hydroxyglutarate synthase in complex with 2-oxoadipate from Pseudomonas putida 分子名称: 2-OXOADIPIC ACID, Hydroxyglutarate synthase, NICKEL (II) ION 著者 Pereira, J.H, Thompson, M.G, Blake-Hedges, J.M, Keasling, J.D, Adams, P.D. 登録日 2020-03-04 公開日 2020-06-24 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (1.42 Å) 主引用文献 An iron (II) dependent oxygenase performs the last missing step of plant lysine catabolism. Nat Commun, 11, 2020
6ND7	The crystal structure of TerB co-crystallized with polyporic acid 分子名称: 2~3~,2~6~-dihydroxy[1~1~,2~1~:2~4~,3~1~-terphenyl]-2~2~,2~5~-dione, GLYCEROL, ISOPROPYL ALCOHOL, ... 著者 Clinger, J.A, Elshahawi, S.I, Zhang, Y, Hall, R.P, Liu, Y, Thorson, J.S, Phillips Jr, G.N. 登録日 2018-12-13 公開日 2019-12-18 最終更新日 2024-03-13 実験手法 X-RAY DIFFRACTION (1.36 Å) 主引用文献 Structure and Function of Terfestatin Biosynthesis Enzymes TerB and TerC To Be Published
7NBX	Lateral-open conformation of the lid-locked BAM complex (BamA E435C S665C, BamBDCE) by cryoEM 分子名称: Outer membrane protein assembly factor BamA, Outer membrane protein assembly factor BamB, Outer membrane protein assembly factor BamC, ... 著者 Haysom, S.F. 登録日 2021-01-28 公開日 2021-06-02 最終更新日 2021-07-21 実験手法 ELECTRON MICROSCOPY (4.8 Å) 主引用文献 The role of membrane destabilisation and protein dynamics in BAM catalysed OMP folding. Nat Commun, 12, 2021
7ND0	lateral-open conformation of the wild-type BAM complex (BamABCDE) bound to a bactericidal Fab fragment 分子名称: Fab1 heavy chain, Fab1 light chain, Outer membrane protein assembly factor BamA, ... 著者 Iadanza, M.G, Haysom, S.H. 登録日 2021-01-29 公開日 2021-06-02 最終更新日 2021-07-21 実験手法 ELECTRON MICROSCOPY (5.2 Å) 主引用文献 The role of membrane destabilisation and protein dynamics in BAM catalysed OMP folding. Nat Commun, 12, 2021
6XRJ	Crystal structure of the disulfide linked DH717.1 Fab dimer, derived from a macaque HIV-1 vaccine-induced Env glycan-reactive neutralizing antibody B cell lineage 分子名称: DH717.1 heavy chain Fab fragment, DH717.1 light chain Fab fragment 著者 Manne, K, Nicely, N.I, Acharya, P. 登録日 2020-07-13 公開日 2020-12-30 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (3.15 Å) 主引用文献 Fab-dimerized glycan-reactive antibodies are a structural category of natural antibodies. Cell, 184, 2021
7NCS	Lateral-open conformation of the lid-locked BAM complex (BamA E435C S665C, BamBDCE) bound by a bactericidal Fab fragment 分子名称: Fab1 heavy chain, Fab1 light chain, Outer membrane protein assembly factor BamA, ... 著者 Haysom, S.F, Machin, J.M. 登録日 2021-01-29 公開日 2021-06-02 最終更新日 2021-07-21 実験手法 ELECTRON MICROSCOPY (7.1 Å) 主引用文献 The role of membrane destabilisation and protein dynamics in BAM catalysed OMP folding. Nat Commun, 12, 2021
6W1G	Crystal structure of the hydroxyglutarate synthase from Pseudomonas putida 分子名称: Hydroxyglutarate synthase, NICKEL (II) ION 著者 Pereira, J.H, Thompson, M.G, Blake-Hedges, J.M, Keasling, J.D, Adams, P.D. 登録日 2020-03-04 公開日 2020-06-24 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (1.14 Å) 主引用文献 An iron (II) dependent oxygenase performs the last missing step of plant lysine catabolism. Nat Commun, 11, 2020
4BSX	Crystal Structure of the N terminal domain of TRIF (TIR-domain- containing adapter-inducing interferon-beta) 分子名称: TIR DOMAIN-CONTAINING ADAPTER MOLECULE 1 著者 Ullah, M.O, Ve, T, Mangan, M, Alaidarous, M, Sweet, M.J, Mansell, A, Kobe, B. 登録日 2013-06-12 公開日 2013-12-11 最終更新日 2013-12-18 実験手法 X-RAY DIFFRACTION (2.229 Å) 主引用文献 The Tlr Signalling Adaptor Trif/Ticam-1 Has an N-Terminal Helical Domain with Structural Similarity to Ifit Proteins Acta Crystallogr.,Sect.D, 69, 2013
6VTU	DH717.1 Fab monomer in complex with man9 glycan 分子名称: DH717.1 heavy chain, DH717.1 light chain, GLYCEROL, ... 著者 Fera, D, Bronkema, N. 登録日 2020-02-13 公開日 2020-12-30 最終更新日 2023-10-11 実験手法 X-RAY DIFFRACTION (2.61 Å) 主引用文献 Fab-dimerized glycan-reactive antibodies are a structural category of natural antibodies. Cell, 184, 2021
6NJ5	Thermostable variant of human carbonic anhydrase II with disordered tetrazine 2.0 at site 233 分子名称: Carbonic anhydrase 2, ZINC ION 著者 Kean, K.M, Karplus, P.A. 登録日 2019-01-02 公開日 2019-10-02 最終更新日 2023-10-11 実験手法 X-RAY DIFFRACTION (1.25 Å) 主引用文献 Immobilization of Proteins with Controlled Load and Orientation. ACS Appl Mater Interfaces, 11, 2019
5HVL	Structure of Candida albicans trehalose-6-phosphate synthase in complex with UDP and validoxylamine A 分子名称: (1S,2S,3R,6S)-4-(HYDROXYMETHYL)-6-{[(1S,2S,3S,4R,5R)-2,3,4-TRIHYDROXY-5-(HYDROXYMETHYL)CYCLOHEXYL]AMINO}CYCLOHEX-4-ENE-1,2,3-TRIOL, Alpha,alpha-trehalose-phosphate synthase [UDP-forming], SULFATE ION, ... 著者 Miao, Y, Brennan, R.G. 登録日 2016-01-28 公開日 2017-05-03 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (1.796 Å) 主引用文献 Structural and In Vivo Studies on Trehalose-6-Phosphate Synthase from Pathogenic Fungi Provide Insights into Its Catalytic Mechanism, Biological Necessity, and Potential for Novel Antifungal Drug Design. MBio, 8, 2017
7O6U	Crystal structure of the VIN3 VEL polymerising domain (R554A R556D mutant) 分子名称: Protein VERNALIZATION INSENSITIVE 3 著者 Fiedler, M, Franco-Echevarria, E, Dean, C, Bienz, M. 登録日 2021-04-12 公開日 2022-11-09 最終更新日 2022-11-23 実験手法 X-RAY DIFFRACTION (1.84 Å) 主引用文献 Head-to-tail polymerization by VEL proteins underpins cold-induced Polycomb silencing in flowering control. Cell Rep, 41, 2022
7O6T	Crystal structure of the polymerising VEL domain of VIN3 (R556D I575D mutant) 分子名称: MAGNESIUM ION, Protein VERNALIZATION INSENSITIVE 3 著者 Fiedler, M, Franco-Echevarria, E, Dean, C, Bienz, M. 登録日 2021-04-12 公開日 2022-11-09 最終更新日 2022-11-23 実験手法 X-RAY DIFFRACTION (2.02 Å) 主引用文献 Head-to-tail polymerization by VEL proteins underpins cold-induced Polycomb silencing in flowering control. Cell Rep, 41, 2022
7O6V	Crystal structure of the VEL1 VEL polymerising domain (R643A K645D I664D mutant) 分子名称: VIN3-like protein 2 著者 Fiedler, M, Franco-Echevarria, E, Dean, C, Bienz, M. 登録日 2021-04-12 公開日 2022-11-09 最終更新日 2022-11-23 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Head-to-tail polymerization by VEL proteins underpins cold-induced Polycomb silencing in flowering control. Cell Rep, 41, 2022
7O6W	Crystal structure of (the) VEL1 VEL polymerising domain (I664D mutant) 分子名称: PHOSPHATE ION, VIN3-like protein 2 著者 Fiedler, M, Franco-Echevarria, E, Dean, C, Bienz, M. 登録日 2021-04-12 公開日 2022-11-09 最終更新日 2024-06-19 実験手法 X-RAY DIFFRACTION (2.64 Å) 主引用文献 Head-to-tail polymerization by VEL proteins underpins cold-induced Polycomb silencing in flowering control. Cell Rep, 41, 2022

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