Loading
PDBj
メニューPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

1L3U
DownloadVisualize
BU of 1l3u by Molmil
Crystal Structure of Bacillus DNA Polymerase I Fragment product complex with 11 base pairs of duplex DNA following addition of a dTTP and a dATP residue.
分子名称: 5'-D(*GP*AP*C*GP*TP*AP*CP*GP*TP*GP*AP*TP*CP*GP*CP*A)-3', 5'-D(*GP*CP*GP*AP*TP*CP*AP*CP*GP*TP*A)-3', DNA Polymerase I, ...
著者Johnson, S.J, Taylor, J.S, Beese, L.S.
登録日2002-03-01
公開日2003-03-25
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Processive DNA synthesis observed in a polymerase crystal suggests a mechanism for the prevention of frameshift mutations
Proc.Natl.Acad.Sci.USA, 100, 2003
3CQB
DownloadVisualize
BU of 3cqb by Molmil
Crystal structure of heat shock protein HtpX domain from Vibrio parahaemolyticus RIMD 2210633
分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, GLYCEROL, ...
著者Wu, R, Clancy, S, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
登録日2008-04-02
公開日2008-05-27
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (1.86 Å)
主引用文献The crystal structure of heat shock protein HtpX domain from Vibrio parahaemolyticus RIMD 2210633.
To be Published
3CQG
DownloadVisualize
BU of 3cqg by Molmil
Nucleoporin Nup107/Nup133 interaction complex, delta finger mutant
分子名称: Nuclear pore complex protein Nup107, Nuclear pore complex protein Nup133
著者Jeudy, S, Boehmer, T, Berke, I, Schwartz, T.U.
登録日2008-04-02
公開日2008-07-01
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Structural and functional studies of Nup107/Nup133 interaction and its implications for the architecture of the nuclear pore complex.
Mol.Cell, 30, 2008
3CQP
DownloadVisualize
BU of 3cqp by Molmil
Human SOD1 G85R Variant, Structure I
分子名称: COPPER (II) ION, MALONATE ION, Superoxide dismutase [Cu-Zn], ...
著者Cao, X, Antonyuk, S, Seetharaman, S.V, Whitson, L.J, Taylor, A.B, Holloway, S.P, Strange, R.W, Doucette, P.A, Valentine, J.S, Tiwari, A, Hayward, L.J, Padua, S, Cohlberg, J.A, Hasnain, S.S, Hart, P.J.
登録日2008-04-03
公開日2008-04-29
最終更新日2024-11-13
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Structures of the G85R Variant of SOD1 in Familial Amyotrophic Lateral Sclerosis.
J.Biol.Chem., 283, 2008
3D2W
DownloadVisualize
BU of 3d2w by Molmil
Crystal structure of mouse TDP-43 RRM2 domain in complex with DNA
分子名称: DNA (5'-D(*DGP*DTP*DTP*DGP*DAP*DGP*DCP*DGP*DTP*DT)-3'), PHOSPHATE ION, TAR DNA-binding protein 43
著者Kuo, P.H, Yuan, H.S.
登録日2008-05-09
公開日2009-04-07
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Structural insights into TDP-43 in nucleic-acid binding and domain interactions
Nucleic Acids Res., 37, 2009
3D31
DownloadVisualize
BU of 3d31 by Molmil
ModBC from Methanosarcina acetivorans
分子名称: Sulfate/molybdate ABC transporter, ATP-binding protein, permease protein, ...
著者Gerber, S, Comellas-Bigler, M, Locher, K.P.
登録日2008-05-09
公開日2008-06-10
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Structural basis of trans-inhibition in a molybdate/tungstate ABC transporter.
Science, 321, 2008
3D3S
DownloadVisualize
BU of 3d3s by Molmil
Crystal structure of L-2,4-diaminobutyric acid acetyltransferase from Bordetella parapertussis
分子名称: 2,4-DIAMINOBUTYRIC ACID, GLYCEROL, L-2,4-diaminobutyric acid acetyltransferase, ...
著者Kim, Y, Volkart, L, Jedrzejczak, R, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
登録日2008-05-12
公開日2008-07-15
最終更新日2024-11-13
実験手法X-RAY DIFFRACTION (1.87 Å)
主引用文献Crystal structure of L-2,4-diaminobutyric acid acetyltransferase from Bordetella parapertussis.
To be Published
3CIO
DownloadVisualize
BU of 3cio by Molmil
The kinase domain of Escherichia coli tyrosine kinase ETK
分子名称: CHLORIDE ION, Tyrosine-protein kinase etk
著者Lee, D.C, Zheng, J, Jia, Z.
登録日2008-03-11
公開日2008-06-03
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structure of Escherichia coli tyrosine kinase Etk reveals a novel activation mechanism.
Embo J., 27, 2008
1L5U
DownloadVisualize
BU of 1l5u by Molmil
Crystal Structure of Bacillus DNA Polymerase I Fragment product complex with 12 base pairs of duplex DNA following addition of a dTTP, a dATP, and a dCTP residue.
分子名称: 5'-D(*GP*A*CP*GP*TP*AP*CP*GP*TP*GP*AP*TP*CP*GP*CP*A)-3', 5'-D(*GP*CP*GP*AP*TP*CP*AP*CP*GP*TP*AP*C)-3', DNA Polymerase I, ...
著者Johnson, S.J, Taylor, J.S, Beese, L.S.
登録日2002-03-08
公開日2003-03-25
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Processive DNA synthesis observed in a polymerase crystal suggests a mechanism for the prevention of frameshift mutations
Proc.Natl.Acad.Sci.USA, 100, 2003
3CRE
DownloadVisualize
BU of 3cre by Molmil
Electron Microscopy model of the Saf Pilus- Type A
分子名称: Outer membrane protein
著者Salih, O, Remaut, H, Waksman, G, Orlova, E.V.
登録日2008-04-07
公開日2008-05-20
最終更新日2024-02-21
実験手法ELECTRON MICROSCOPY (17 Å)
主引用文献Structural analysis of the Saf pilus by electron microscopy and image processing.
J.Mol.Biol., 379, 2008
3CJ1
DownloadVisualize
BU of 3cj1 by Molmil
Structure of Rattus norvegicus NTPDase2
分子名称: Ectonucleoside triphosphate diphosphohydrolase 2
著者Zebisch, M, Strater, N.
登録日2008-03-12
公開日2008-04-29
最終更新日2024-11-06
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structural insight into signal conversion and inactivation by NTPDase2 in purinergic signaling
Proc.Natl.Acad.Sci.Usa, 105, 2008
3CJA
DownloadVisualize
BU of 3cja by Molmil
Structure of Rattus norvegicus NTPDase2 in complex with calcium and AMPPNP
分子名称: CALCIUM ION, Ectonucleoside triphosphate diphosphohydrolase 2, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER
著者Zebisch, M, Strater, N.
登録日2008-03-12
公開日2008-04-29
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structural insight into signal conversion and inactivation by NTPDase2 in purinergic signaling
Proc.Natl.Acad.Sci.Usa, 105, 2008
3CJI
DownloadVisualize
BU of 3cji by Molmil
Structure of Seneca Valley Virus-001
分子名称: CALCIUM ION, Polyprotein
著者Venkataraman, S, Reddy, V.S.
登録日2008-03-13
公開日2008-12-16
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structure of Seneca Valley Virus-001: an oncolytic picornavirus representing a new genus
Structure, 16, 2008
3CKE
DownloadVisualize
BU of 3cke by Molmil
Crystal structure of aristolochene synthase in complex with 12,13-difluorofarnesyl diphosphate
分子名称: (2E,6E)-12-fluoro-11-(fluoromethyl)-3,7-dimethyldodeca-2,6,10-trien-1-yl trihydrogen diphosphate, Aristolochene synthase, BETA-MERCAPTOETHANOL, ...
著者Shishova, E.Y, Yu, F, Miller, D.J, Faraldos, J.A, Zhao, Y, Coates, R.M, Allemann, R.K, Cane, D.E, Christianson, D.W.
登録日2008-03-14
公開日2008-04-01
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献X-ray Crystallographic Studies of Substrate Binding to Aristolochene Synthase Suggest a Metal Ion Binding Sequence for Catalysis.
J.Biol.Chem., 283, 2008
5JYJ
DownloadVisualize
BU of 5jyj by Molmil
Crystal structure of mouse JUNO
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Sperm-egg fusion protein Juno
著者Kato, K, Nishimasu, H, Morita, J, Ishitani, R, Nureki, O.
登録日2016-05-14
公開日2017-05-24
最終更新日2024-11-20
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal structure of the egg IZUMO1 receptor JUNO
To Be Published
3CS6
DownloadVisualize
BU of 3cs6 by Molmil
Structure-based design of a superagonist ligand for the vitamin D nuclear receptor
分子名称: (1S,3R,5Z,7E,14beta,17alpha,23R)-23-(2-hydroxy-2-methylpropyl)-20,24-epoxy-9,10-secochola-5,7,10-triene-1,3-diol, Vitamin D3 receptor
著者Hourai, S, Rodriguez, L.C, Antony, P, Reina-San-Martin, B, Ciesielski, P, Magnier, B.C, Schoonjans, K, Mourino, A, Rochel, N, Moras, D.
登録日2008-04-09
公開日2008-05-27
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structure-based design of a superagonist ligand for the vitamin d nuclear receptor.
Chem.Biol., 15, 2008
3CTL
DownloadVisualize
BU of 3ctl by Molmil
Crystal structure of D-Allulose 6-Phosphate 3-Epimerase from Escherichia coli K12 complexed with D-glucitol 6-phosphate and magnesium
分子名称: D-SORBITOL-6-PHOSPHATE, D-allulose-6-phosphate 3-epimerase, MAGNESIUM ION
著者Fedorov, A.A, Fedorov, E.V, Chan, K.K, Gerlt, J.A, Almo, S.C.
登録日2008-04-14
公開日2009-02-24
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structural basis for substrate specificity in phosphate binding (beta/alpha)8-barrels: D-allulose 6-phosphate 3-epimerase from Escherichia coli K-12.
Biochemistry, 47, 2008
3CUE
DownloadVisualize
BU of 3cue by Molmil
Crystal structure of a TRAPP subassembly activating the Rab Ypt1p
分子名称: GTP-binding protein YPT1, PALMITIC ACID, Transport protein particle 18 kDa subunit, ...
著者Cai, Y, Reinisch, K.M.
登録日2008-04-16
公開日2008-07-08
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (3.7 Å)
主引用文献The structural basis for activation of the Rab Ypt1p by the TRAPP membrane-tethering complexes.
Cell(Cambridge,Mass.), 133, 2008
3CL9
DownloadVisualize
BU of 3cl9 by Molmil
Structure of bifunctional TcDHFR-TS in complex with MTX
分子名称: 1,2-ETHANEDIOL, 2'-DEOXYURIDINE 5'-MONOPHOSPHATE, Bifunctional dihydrofolate reductase-thymidylate synthase (DHFR-TS), ...
著者Schormann, N, Senkovich, O, Chattopadhyay, D.
登録日2008-03-18
公開日2009-01-06
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (3.3 Å)
主引用文献Structure-based approach to pharmacophore identification, in silico screening, and three-dimensional quantitative structure-activity relationship studies for inhibitors of Trypanosoma cruzi dihydrofolate reductase function.
Proteins, 73, 2008
2IIT
DownloadVisualize
BU of 2iit by Molmil
Human dipeptidyl peptidase 4 in complex with a diazepan-2-one inhibitor
分子名称: (3R)-4-[(3R)-3-AMINO-4-(2,4,5-TRIFLUOROPHENYL)BUTANOYL]-3-(2,2,2-TRIFLUOROETHYL)-1,4-DIAZEPAN-2-ONE, 2-acetamido-2-deoxy-alpha-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Scapin, G, Biftu, T, Weber, A.E.
登録日2006-09-28
公開日2006-11-28
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献(3R)-4-[(3R)-3-Amino-4-(2,4,5-trifluorophenyl)butanoyl]-3-(2,2,2-trifluoroethyl)-1,4-diazepan-2-one, a selective dipeptidyl peptidase IV inhibitor for the treatment of type 2 diabetes
Bioorg.Med.Chem.Lett., 17, 2007
1LCS
DownloadVisualize
BU of 1lcs by Molmil
RECEPTOR-BINDING DOMAIN FROM SUBGROUP B FELINE LEUKEMIA VIRUS
分子名称: 2-[2-(2-METHOXY-ETHOXY)-ETHOXY]-ETHOXYL, 2-acetamido-2-deoxy-alpha-D-glucopyranose-(1-2)-beta-D-mannopyranose-(1-6)-alpha-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Barnett, A.L, Wensel, D.L, Li, W, Fass, D, Cunningham, J.M.
登録日2002-04-06
公開日2003-04-08
最終更新日2024-11-13
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structure and Mechanism of a Coreceptor for Infection by a pathogenic feline retrovirus
J.Virol., 77, 2003
1LD8
DownloadVisualize
BU of 1ld8 by Molmil
Co-crystal structure of Human Farnesyltransferase with farnesyldiphosphate and inhibitor compound 49
分子名称: (20S)-19,20,21,22-TETRAHYDRO-19-OXO-5H-18,20-ETHANO-12,14-ETHENO-6,10-METHENO-18H-BENZ[D]IMIDAZO[4,3-K][1,6,9,12]OXATRI AZA-CYCLOOCTADECOSINE-9-CARBONITRILE, ACETIC ACID, FARNESYL DIPHOSPHATE, ...
著者Taylor, J.S, Terry, K.L, Beese, L.S.
登録日2002-04-08
公開日2002-06-19
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献3-Aminopyrrolidinone farnesyltransferase inhibitors: design of macrocyclic compounds with improved pharmacokinetics and excellent cell potency.
J.Med.Chem., 45, 2002
3CWZ
DownloadVisualize
BU of 3cwz by Molmil
Structure of RAB6(GTP)-R6IP1 complex
分子名称: GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, Rab6-interacting protein 1, ...
著者Recacha, R, Houdusse, A, Goud, B, Khan, A.R.
登録日2008-04-23
公開日2008-11-18
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Structural basis for recruitment of Rab6-interacting protein 1 to Golgi via a RUN domain.
Structure, 17, 2009
3CLX
DownloadVisualize
BU of 3clx by Molmil
Crystal structure of XIAP BIR3 domain in complex with a Smac-mimetic compound, Smac005
分子名称: (3S,6S,7S,9aS)-6-{[(2S)-2-aminobutanoyl]amino}-N-(diphenylmethyl)-7-(hydroxymethyl)-5-oxooctahydro-1H-pyrrolo[1,2-a]azepine-3-carboxamide, Baculoviral IAP repeat-containing protein 4, ZINC ION
著者Milani, M, Mastrangelo, E, Cossu, F.
登録日2008-03-20
公開日2008-10-28
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Targeting the X-linked inhibitor of apoptosis protein through 4-substituted azabicyclo[5.3.0]alkane smac mimetics. Structure, activity, and recognition principles.
J.Mol.Biol., 384, 2008
3CM5
DownloadVisualize
BU of 3cm5 by Molmil
Crystal structure of Cell-Death Related Nuclease 4 (CRN-4) bound with Mn
分子名称: Cell death-related nuclease 4, MANGANESE (II) ION, ZINC ION
著者Hsiao, Y.-Y, Yuan, H.S.
登録日2008-03-21
公開日2008-12-30
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.81 Å)
主引用文献Crystal structure of CRN-4: implications for domain function in apoptotic DNA degradation
Mol.Cell.Biol., 29, 2009

238582

件を2025-07-09に公開中

PDB statisticsPDBj update infoContact PDBjnumon